RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 SYDE2Q5VT97 1194 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 BTNL9Q6UXG8 535 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 DCAF4Q8WV16 495 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 APPBP2Q92624 585 aa14.82□□□□□ -0.04
SCAF1-202ENST00000595242 PLXNA4Q9HCM2 1894 aa14.81□□□□□ -0.04
SCAF1-202ENST00000595242 TSPY2A6NKD2 308 aa14.81□□□□□ -0.04
SCAF1-202ENST00000595242 PTMSP20962 102 aa14.81□□□□□ -0.04
SCAF1-202ENST00000595242 AK2P54819 239 aa14.81□□□□□ -0.04
SCAF1-202ENST00000595242 ADCK5Q3MIX3 580 aa14.81□□□□□ -0.04
SCAF1-202ENST00000595242 RUFY3Q7L099 469 aa14.81□□□□□ -0.04
SCAF1-202ENST00000595242 SERINC5Q86VE9 423 aa14.81□□□□□ -0.04
SCAF1-202ENST00000595242 SMRP1Q8NCR6 262 aa14.81□□□□□ -0.04
SCAF1-202ENST00000595242 JAKMIP1Q96N16 626 aaKnown RBP14.81□□□□□ -0.04
SCAF1-202ENST00000595242 GBP4Q96PP9 640 aa14.81□□□□□ -0.04
SCAF1-202ENST00000595242 INCENPQ9NQS7 918 aa14.81□□□□□ -0.04
SCAF1-202ENST00000595242 CLEC1BQ9P126 229 aa14.81□□□□□ -0.04
SCAF1-202ENST00000595242 RWDD3Q9Y3V2 267 aa14.81□□□□□ -0.04
SCAF1-202ENST00000595242 CYP46A1Q9Y6A2 500 aa14.81□□□□□ -0.04
SCAF1-202ENST00000595242 DNAH14Q0VDD8 3507 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 M0R2C6 588 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 KDM4AO75164 1064 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 LINC00271P0C7V0 271 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 NUBP1P53384 320 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 PPARAQ07869 468 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 COASYQ13057 564 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 EMID1Q96A84 441 aaPredicted RBP14.8□□□□□ -0.04
SCAF1-202ENST00000595242 RPGRIP1Q96KN7 1286 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 ZSCAN31Q96LW9 406 aaPredicted RBP14.8□□□□□ -0.04
SCAF1-202ENST00000595242 OSBPL7Q9BZF2 842 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 NACAP1Q9BZK3 213 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 GPCPD1Q9NPB8 672 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 DDX41Q9UJV9 622 aaKnown RBP14.8□□□□□ -0.04
SCAF1-202ENST00000595242 PNMA2Q9UL42 364 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 LIMCH1Q9UPQ0 1083 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 FRMPD2Q68DX3 1309 aaPredicted RBP14.8□□□□□ -0.04
SCAF1-202ENST00000595242 LOXHD1Q8IVV2 1947 aa14.8□□□□□ -0.04
SCAF1-202ENST00000595242 GALR2O43603 387 aaPredicted RBP14.79□□□□□ -0.04
SCAF1-202ENST00000595242 ZNF292O60281 2723 aa14.79□□□□□ -0.04
SCAF1-202ENST00000595242 MMP1P03956 469 aa14.79□□□□□ -0.04
SCAF1-202ENST00000595242 NBL1P41271 181 aa14.79□□□□□ -0.04
SCAF1-202ENST00000595242 CAMK1Q14012 370 aa14.79□□□□□ -0.04
SCAF1-202ENST00000595242 PPTC7Q8NI37 304 aa14.79□□□□□ -0.04
SCAF1-202ENST00000595242 SEC62Q99442 399 aaKnown RBP14.79□□□□□ -0.04
SCAF1-202ENST00000595242 SH2B1Q9NRF2 756 aaPredicted RBP14.79□□□□□ -0.04
SCAF1-202ENST00000595242 PDRG1Q9NUG6 133 aa14.79□□□□□ -0.04
SCAF1-202ENST00000595242 DOCK5Q9H7D0 1870 aa14.78□□□□□ -0.04
SCAF1-202ENST00000595242 PDGFBP01127 241 aaPredicted RBP14.78□□□□□ -0.04
SCAF1-202ENST00000595242 RPS6KB1P23443 525 aa14.78□□□□□ -0.04
SCAF1-202ENST00000595242 ICAM3P32942 547 aa14.78□□□□□ -0.04
SCAF1-202ENST00000595242 LAMC2Q13753 1193 aa14.78□□□□□ -0.04
SCAF1-202ENST00000595242 STXBP2Q15833 593 aa14.78□□□□□ -0.04
SCAF1-202ENST00000595242 CLP1Q92989 425 aaKnown RBP14.78□□□□□ -0.04
SCAF1-202ENST00000595242 PPP2R3CQ969Q6 453 aa14.78□□□□□ -0.04
SCAF1-202ENST00000595242 PHF7Q9BWX1 381 aaPredicted RBP14.78□□□□□ -0.04
SCAF1-202ENST00000595242 NAPBQ9H115 298 aa14.78□□□□□ -0.04
SCAF1-202ENST00000595242 USP15Q9Y4E8 981 aaPredicted RBP14.78□□□□□ -0.04
SCAF1-202ENST00000595242 ADGRA3Q8IWK6 1321 aa14.77□□□□□ -0.04
SCAF1-202ENST00000595242 WDR19Q8NEZ3 1342 aa14.77□□□□□ -0.04
SCAF1-202ENST00000595242 CTSHP09668 335 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 NOVP48745 357 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 ANKRD1Q15327 319 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 PTPN21Q16825 1174 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 USH1GQ495M9 461 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 BLOC1S2Q6QNY1 142 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 ADGRD2Q7Z7M1 963 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 EFHBQ8N7U6 833 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 RGS22Q8NE09 1264 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 NSUN6Q8TEA1 469 aaKnown RBP14.77□□□□□ -0.05
SCAF1-202ENST00000595242 APBB2Q92870 758 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 ATP6V0A1Q93050 837 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 RIPOR3Q96MK2 946 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 TAAR1Q96RJ0 339 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 PLVAPQ9BX97 442 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 PLAGL2Q9UPG8 496 aa14.77□□□□□ -0.05
SCAF1-202ENST00000595242 RANBP6O60518 1105 aaKnown RBP14.76□□□□□ -0.05
SCAF1-202ENST00000595242 PPFIA4O75335 1185 aa14.76□□□□□ -0.05
SCAF1-202ENST00000595242 BRD1O95696 1058 aa14.76□□□□□ -0.05
SCAF1-202ENST00000595242 CYP21A2P08686 494 aa14.76□□□□□ -0.05
SCAF1-202ENST00000595242 HSPD1P10809 573 aaKnown RBP14.76□□□□□ -0.05
SCAF1-202ENST00000595242 TBC1D5Q92609 795 aa14.76□□□□□ -0.05
SCAF1-202ENST00000595242 NKD2Q969F2 451 aaPredicted RBP14.76□□□□□ -0.05
SCAF1-202ENST00000595242 IWS1Q96ST2 819 aa14.76□□□□□ -0.05
SCAF1-202ENST00000595242 BARX2Q9UMQ3 279 aaPredicted RBP14.76□□□□□ -0.05
SCAF1-202ENST00000595242 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCAF1-202ENST00000595242 ZDHHC9Q9Y397 364 aa14.76□□□□□ -0.05
SCAF1-202ENST00000595242 MRVI1Q9Y6F6 885 aa14.76□□□□□ -0.05
SCAF1-202ENST00000595242 EP300Q09472 2414 aaPredicted RBP14.76□□□□□ -0.05
SCAF1-202ENST00000595242 C17orf102A2RUQ5 167 aa14.75□□□□□ -0.05
SCAF1-202ENST00000595242 TREHO43280 583 aa14.75□□□□□ -0.05
SCAF1-202ENST00000595242 CAND2O75155 1236 aa14.75□□□□□ -0.05
SCAF1-202ENST00000595242 RGS20O76081 388 aa14.75□□□□□ -0.05
SCAF1-202ENST00000595242 GLP2RO95838 553 aa14.75□□□□□ -0.05
SCAF1-202ENST00000595242 HOXD8P13378 290 aaPredicted RBP14.75□□□□□ -0.05
SCAF1-202ENST00000595242 DNAJB1P25685 340 aa14.75□□□□□ -0.05
SCAF1-202ENST00000595242 NRIP1P48552 1158 aa14.75□□□□□ -0.05
SCAF1-202ENST00000595242 CTDSPL2Q05D32 466 aa14.75□□□□□ -0.05
SCAF1-202ENST00000595242 BTG3Q14201 252 aaPredicted RBP14.75□□□□□ -0.05
SCAF1-202ENST00000595242 RBM23Q86U06 439 aaKnown RBP14.75□□□□□ -0.05
SCAF1-202ENST00000595242 ADSSL1Q8N142 457 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms