RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 FOXR2Q6PJQ5 311 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 TRIM59Q8IWR1 403 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 CEP63Q96MT8 703 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 NT5C3AQ9H0P0 336 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 ATP6V0A2Q9Y487 856 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 PCDHA2Q9Y5H9 948 aa18.16■□□□□ 0.5
LIG1-206ENST00000594067 HOXA7P31268 230 aaPredicted RBP18.15■□□□□ 0.5
LIG1-206ENST00000594067 CFAP221Q4G0U5 840 aa18.15■□□□□ 0.5
LIG1-206ENST00000594067 TTMPQ5BVD1 217 aa18.15■□□□□ 0.5
LIG1-206ENST00000594067 EMBQ6PCB8 327 aa18.15■□□□□ 0.5
LIG1-206ENST00000594067 SCFD1Q8WVM8 642 aa18.15■□□□□ 0.5
LIG1-206ENST00000594067 MXD3Q9BW11 206 aa18.15■□□□□ 0.5
LIG1-206ENST00000594067 PACSIN2Q9UNF0 486 aaPredicted RBP18.15■□□□□ 0.5
LIG1-206ENST00000594067 SHMT1P34896 483 aa18.15■□□□□ 0.5
LIG1-206ENST00000594067 HYIQ5T013 277 aa18.15■□□□□ 0.5
LIG1-206ENST00000594067 ALS2CLQ60I27 953 aa18.15■□□□□ 0.5
LIG1-206ENST00000594067 TTC19Q6DKK2 380 aaPredicted RBP18.15■□□□□ 0.5
LIG1-206ENST00000594067 FAM133AQ8N9E0 248 aa18.15■□□□□ 0.5
LIG1-206ENST00000594067 PACSIN1Q9BY11 444 aa18.15■□□□□ 0.5
LIG1-206ENST00000594067 NUCKS1Q9H1E3 243 aaKnown RBP18.15■□□□□ 0.5
LIG1-206ENST00000594067 EMILIN3Q9NT22 766 aa18.15■□□□□ 0.5
LIG1-206ENST00000594067 NHSQ6T4R5 1651 aa18.14■□□□□ 0.5
LIG1-206ENST00000594067 KDM3AQ9Y4C1 1321 aa18.14■□□□□ 0.5
LIG1-206ENST00000594067 A0A087X0T9 212 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 ERLIN2O94905 339 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 KRT18P05783 430 aaKnown RBP18.14■□□□□ 0.49
LIG1-206ENST00000594067 FAM228BP0C875 321 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 GCFC2P16383 781 aaKnown RBP18.14■□□□□ 0.49
LIG1-206ENST00000594067 LIG3P49916 1009 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 ADAM9Q13443 819 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 SUGP1Q8IWZ8 645 aaKnown RBP18.14■□□□□ 0.49
LIG1-206ENST00000594067 SYN2Q92777 582 aaPredicted RBP18.14■□□□□ 0.49
LIG1-206ENST00000594067 KAT2BQ92831 832 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 USP40Q9NVE5 1235 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 ADAMTS1Q9UHI8 967 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 BBOX1O75936 387 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 CYP11B2P19099 503 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 SCNN1DP51172 638 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 RNASE9P60153 205 aaKnown RBP18.14■□□□□ 0.49
LIG1-206ENST00000594067 SKOR1P84550 965 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 MMS22LQ6ZRQ5 1243 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 CAVIN3Q969G5 261 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 KCTD10Q9H3F6 313 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 TSKSQ9UJT2 592 aa18.14■□□□□ 0.49
LIG1-206ENST00000594067 ATF5Q9Y2D1 282 aaPredicted RBP18.14■□□□□ 0.49
LIG1-206ENST00000594067 ESYT3A0FGR9 886 aa18.13■□□□□ 0.49
LIG1-206ENST00000594067 ZSCAN5CA6NGD5 496 aaPredicted RBP18.13■□□□□ 0.49
LIG1-206ENST00000594067 MED24O75448 989 aa18.13■□□□□ 0.49
LIG1-206ENST00000594067 GNA14O95837 355 aa18.13■□□□□ 0.49
LIG1-206ENST00000594067 GLI1P08151 1106 aa18.13■□□□□ 0.49
LIG1-206ENST00000594067 EPS15P42566 896 aa18.13■□□□□ 0.49
LIG1-206ENST00000594067 KLHL30Q0D2K2 578 aa18.13■□□□□ 0.49
LIG1-206ENST00000594067 NAB2Q15742 525 aa18.13■□□□□ 0.49
LIG1-206ENST00000594067 CERS5Q8N5B7 392 aa18.13■□□□□ 0.49
LIG1-206ENST00000594067 LRRC4BQ9NT99 713 aa18.13■□□□□ 0.49
LIG1-206ENST00000594067 TNFRSF8P28908 595 aa18.13■□□□□ 0.49
LIG1-206ENST00000594067 SLC18A3Q16572 532 aa18.13■□□□□ 0.49
LIG1-206ENST00000594067 KIAA0753Q2KHM9 967 aa18.13■□□□□ 0.49
LIG1-206ENST00000594067 GPATCH4Q5T3I0 446 aaKnown RBP18.13■□□□□ 0.49
LIG1-206ENST00000594067 ARHGAP27Q6ZUM4 889 aa18.13■□□□□ 0.49
LIG1-206ENST00000594067 LUC7LQ9NQ29 371 aaKnown RBP18.13■□□□□ 0.49
LIG1-206ENST00000594067 SHTN1A0MZ66 631 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 GYS1P13807 737 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 CARSP49589 748 aaKnown RBP18.12■□□□□ 0.49
LIG1-206ENST00000594067 ASIC2Q16515 512 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 YY1AP1Q9H869 796 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 POTEFA5A3E0 1075 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 HSF2BPO75031 334 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 POTEIP0CG38 1075 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 ACTN1P12814 892 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 KCNH2Q12809 1159 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 QRICH1Q2TAL8 776 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 ARSHQ5FYA8 562 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 POTEGQ6S5H5 508 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 POTEEQ6S8J3 1075 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 IFT81Q8WYA0 676 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 RUFY1Q96T51 708 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 GANQ9H2C0 597 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 EPB41L5Q9HCM4 733 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 SWAP70Q9UH65 585 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 NFU1Q9UMS0 254 aa18.12■□□□□ 0.49
LIG1-206ENST00000594067 CASP5P51878 434 aa18.11■□□□□ 0.49
LIG1-206ENST00000594067 MARSP56192 900 aaKnown RBP18.11■□□□□ 0.49
LIG1-206ENST00000594067 GUCY2DQ02846 1103 aa18.11■□□□□ 0.49
LIG1-206ENST00000594067 ZIM3Q96PE6 472 aa18.11■□□□□ 0.49
LIG1-206ENST00000594067 CETN3O15182 167 aa18.11■□□□□ 0.49
LIG1-206ENST00000594067 HEXIM1O94992 359 aaKnown RBP18.11■□□□□ 0.49
LIG1-206ENST00000594067 FAM153BP0C7A2 387 aa18.11■□□□□ 0.49
LIG1-206ENST00000594067 FAM153CQ494X1 144 aa18.11■□□□□ 0.49
LIG1-206ENST00000594067 GLE1Q53GS7 698 aaKnown RBP18.11■□□□□ 0.49
LIG1-206ENST00000594067 IFT20Q8IY31 132 aa18.11■□□□□ 0.49
LIG1-206ENST00000594067 KRT12Q99456 494 aa18.11■□□□□ 0.49
LIG1-206ENST00000594067 ANO3Q9BYT9 981 aa18.11■□□□□ 0.49
LIG1-206ENST00000594067 KCNMB3Q9NPA1 279 aa18.11■□□□□ 0.49
LIG1-206ENST00000594067 FAM153AQ9UHL3 310 aa18.11■□□□□ 0.49
LIG1-206ENST00000594067 SAMM50Q9Y512 469 aa18.11■□□□□ 0.49
LIG1-206ENST00000594067 PCDHA1Q9Y5I3 950 aa18.11■□□□□ 0.49
LIG1-206ENST00000594067 MYH7BA7E2Y1 1941 aa18.11■□□□□ 0.49
LIG1-206ENST00000594067 MEIS1O00470 390 aa18.1■□□□□ 0.49
LIG1-206ENST00000594067 NR2F2P24468 414 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms