RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 RAD54LQ92698 747 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 GPRASP2Q96D09 838 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 EIF2AK1Q9BQI3 630 aaKnown RBP14.78□□□□□ -0.04
VRK3-205ENST00000593919 ADD3Q9UEY8 706 aaKnown RBP14.78□□□□□ -0.04
VRK3-205ENST00000593919 KIAA1024Q9UPX6 916 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 LOXHD1Q8IVV2 1947 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 DNAJC25-GNG10A0A024R161 153 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 SLC26A4O43511 780 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 ATP9AO75110 1047 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 STAM2O75886 525 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 CYP4A11Q02928 519 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 DHX8Q14562 1220 aaKnown RBP14.78□□□□□ -0.04
VRK3-205ENST00000593919 MCM6Q14566 821 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 FAM110CQ1W6H9 321 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 NLRX1Q86UT6 975 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 GSDMAQ96QA5 445 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 STK24Q9Y6E0 443 aa14.78□□□□□ -0.04
VRK3-205ENST00000593919 MYL1P05976 194 aa14.77□□□□□ -0.04
VRK3-205ENST00000593919 EDNRBP24530 442 aa14.77□□□□□ -0.04
VRK3-205ENST00000593919 MORC3Q14149 939 aa14.77□□□□□ -0.04
VRK3-205ENST00000593919 STXBP2Q15833 593 aa14.77□□□□□ -0.04
VRK3-205ENST00000593919 SV2BQ7L1I2 683 aa14.77□□□□□ -0.04
VRK3-205ENST00000593919 TRIML1Q8N9V2 468 aa14.77□□□□□ -0.04
VRK3-205ENST00000593919 FGD4Q96M96 766 aa14.77□□□□□ -0.04
VRK3-205ENST00000593919 RGL1Q9NZL6 768 aa14.77□□□□□ -0.04
VRK3-205ENST00000593919 E9PMD0 336 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 MAFGO15525 162 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 LRMPQ12912 555 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 CCDC144BQ3MJ40 725 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 GNPTABQ3T906 1256 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 KIAA1524Q8TCG1 905 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 CCDC102AQ96A19 550 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 MRFAP1L1Q96HT8 127 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 HSD17B14Q9BPX1 270 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 BPIFA3Q9BQP9 254 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 POLR3CQ9BUI4 534 aaPredicted RBP14.76□□□□□ -0.05
VRK3-205ENST00000593919 TRIM9Q9C026 710 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 ZCCHC17Q9NP64 241 aaKnown RBP14.76□□□□□ -0.05
VRK3-205ENST00000593919 TBC1D22BQ9NU19 505 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 MYH9P35579 1960 aaKnown RBP14.76□□□□□ -0.05
VRK3-205ENST00000593919 ADGRA2Q96PE1 1338 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 EIF3JO75822 258 aaKnown RBP14.76□□□□□ -0.05
VRK3-205ENST00000593919 RPN1P04843 607 aaKnown RBP14.76□□□□□ -0.05
VRK3-205ENST00000593919 AMPD3Q01432 767 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 TAF1CQ15572 869 aaPredicted RBP14.76□□□□□ -0.05
VRK3-205ENST00000593919 IFNL1Q8IU54 200 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 HHIPL1Q96JK4 782 aa14.76□□□□□ -0.05
VRK3-205ENST00000593919 SLITRK3O94933 977 aa14.75□□□□□ -0.05
VRK3-205ENST00000593919 TPM2P07951 284 aa14.75□□□□□ -0.05
VRK3-205ENST00000593919 KCNA2P16389 499 aa14.75□□□□□ -0.05
VRK3-205ENST00000593919 PDE4DQ08499 809 aa14.75□□□□□ -0.05
VRK3-205ENST00000593919 CTTNQ14247 550 aaKnown RBP14.75□□□□□ -0.05
VRK3-205ENST00000593919 MIER3Q7Z3K6 550 aa14.75□□□□□ -0.05
VRK3-205ENST00000593919 DYDC2Q96IM9 177 aa14.75□□□□□ -0.05
VRK3-205ENST00000593919 CDHR1Q96JP9 859 aa14.75□□□□□ -0.05
VRK3-205ENST00000593919 C7orf25Q9BPX7 421 aa14.75□□□□□ -0.05
VRK3-205ENST00000593919 TUFT1Q9NNX1 390 aa14.75□□□□□ -0.05
VRK3-205ENST00000593919 SPTLC3Q9NUV7 552 aa14.75□□□□□ -0.05
VRK3-205ENST00000593919 CPA4Q9UI42 421 aa14.75□□□□□ -0.05
VRK3-205ENST00000593919 MYMKA6NI61 221 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 KLRC4O43908 158 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 ADORA2AP29274 412 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 INHBEP58166 350 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 PSMC6P62333 389 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 GRM1Q13255 1194 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 EPHA7Q15375 998 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 ZIC5Q96T25 663 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 CENPFP49454 3210 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 SPATA31C2B4DYI2 1134 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 PLA2G4BP0C869 781 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 TPM4P67936 248 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 ASIC1P78348 528 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 SREBF2Q12772 1141 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 SEPT14Q6ZU15 432 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 GPR142Q7Z601 462 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 TPH2Q8IWU9 490 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 DNM3Q9UQ16 869 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 SAMM50Q9Y512 469 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 IVNS1ABPQ9Y6Y0 642 aa14.74□□□□□ -0.05
VRK3-205ENST00000593919 MYH11P35749 1972 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 SMTNL1A8MU46 457 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 B4DLN1 442 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 STRNO43815 780 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 CCNE2O96020 404 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 SSBP05455 408 aaKnown RBP eCLIP14.73□□□□□ -0.05
VRK3-205ENST00000593919 ICAM3P32942 547 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 KRT76Q01546 638 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 KMT5BQ4FZB7 885 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 CYP4F22Q6NT55 531 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 EEPD1Q7L9B9 569 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 DYMQ7RTS9 669 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 SMYD4Q8IYR2 804 aaPredicted RBP14.73□□□□□ -0.05
VRK3-205ENST00000593919 ABRAQ8N0Z2 381 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 MLKLQ8NB16 471 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 BANK1Q8NDB2 785 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 DDX12PQ92771 950 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 MPHOSPH6Q99547 160 aaKnown RBP14.73□□□□□ -0.05
VRK3-205ENST00000593919 LXNQ9BS40 222 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 BCAS3Q9H6U6 928 aa14.73□□□□□ -0.05
VRK3-205ENST00000593919 RMND1Q9NWS8 449 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms