RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 GDF6Q6KF10 455 aaPredicted RBP15.18■□□□□ 0.02
H3F3B-213ENST00000593254 CNKSR3Q6P9H4 555 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 POTEBQ6S5H4 581 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 SYNE3Q6ZMZ3 975 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 CCDC82Q8N4S0 544 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 CCDC155Q8N6L0 562 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 DHX38Q92620 1227 aaKnown RBP15.18■□□□□ 0.02
H3F3B-213ENST00000593254 KCNB2Q92953 911 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 SPATA33Q96N06 139 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 KCNH6Q9H252 994 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 PSTPIP2Q9H939 334 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 GTF2IRD1Q9UHL9 959 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 MTUS1Q9ULD2 1270 aa15.18■□□□□ 0.02
H3F3B-213ENST00000593254 CNTNAP5Q8WYK1 1306 aa15.17■□□□□ 0.02
H3F3B-213ENST00000593254 KAT6AQ92794 2004 aa15.17■□□□□ 0.02
H3F3B-213ENST00000593254 hCG_1642624A0A1W2PR95 340 aa15.17■□□□□ 0.02
H3F3B-213ENST00000593254 SPATA31C2B4DYI2 1134 aa15.17■□□□□ 0.02
H3F3B-213ENST00000593254 NBNO60934 754 aa15.17■□□□□ 0.02
H3F3B-213ENST00000593254 PARNO95453 639 aaKnown RBP15.17■□□□□ 0.02
H3F3B-213ENST00000593254 HMGB1P09429 215 aaKnown RBP15.17■□□□□ 0.02
H3F3B-213ENST00000593254 SSTR3P32745 418 aaPredicted RBP15.17■□□□□ 0.02
H3F3B-213ENST00000593254 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
H3F3B-213ENST00000593254 SEMA3FQ13275 785 aa15.17■□□□□ 0.02
H3F3B-213ENST00000593254 KIAA0753Q2KHM9 967 aa15.17■□□□□ 0.02
H3F3B-213ENST00000593254 XRRA1Q6P2D8 792 aa15.17■□□□□ 0.02
H3F3B-213ENST00000593254 LRRC8DQ7L1W4 858 aa15.17■□□□□ 0.02
H3F3B-213ENST00000593254 C7orf31Q8N865 590 aa15.17■□□□□ 0.02
H3F3B-213ENST00000593254 NEK9Q8TD19 979 aa15.17■□□□□ 0.02
H3F3B-213ENST00000593254 MLXIPQ9HAP2 919 aa15.17■□□□□ 0.02
H3F3B-213ENST00000593254 RBM28Q9NW13 759 aaKnown RBP15.17■□□□□ 0.02
H3F3B-213ENST00000593254 HDAC6Q9UBN7 1215 aa15.17■□□□□ 0.02
H3F3B-213ENST00000593254 BRPF3Q9ULD4 1205 aa15.17■□□□□ 0.02
H3F3B-213ENST00000593254 ABHD14A-ACY1A0A1B0GW23 586 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 ZBTB43O43298 467 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 FIBPO43427 364 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 SORBS3O60504 671 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 HSPA4P34932 840 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 RCAN1P53805 252 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 FUT2Q10981 343 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 NEDD9Q14511 834 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 RTN1Q16799 776 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 PUS10Q3MIT2 529 aaKnown RBP15.16■□□□□ 0.02
H3F3B-213ENST00000593254 METTL7BQ6UX53 244 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 SP7Q8TDD2 431 aaPredicted RBP15.16■□□□□ 0.02
H3F3B-213ENST00000593254 FBXL18Q96ME1 805 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 UIMC1Q96RL1 719 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 C16orf70Q9BSU1 422 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 ALG1Q9BT22 464 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 BCAS3Q9H6U6 928 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 RTEL1Q9NZ71 1219 aa15.16■□□□□ 0.02
H3F3B-213ENST00000593254 DCXO43602 365 aa15.15■□□□□ 0.02
H3F3B-213ENST00000593254 EFCAB14O75071 495 aa15.15■□□□□ 0.02
H3F3B-213ENST00000593254 CKBP12277 381 aa15.15■□□□□ 0.02
H3F3B-213ENST00000593254 UBE2SQ16763 222 aa15.15■□□□□ 0.02
H3F3B-213ENST00000593254 TRAF7Q6Q0C0 670 aa15.15■□□□□ 0.02
H3F3B-213ENST00000593254 HEATR3Q7Z4Q2 680 aa15.15■□□□□ 0.02
H3F3B-213ENST00000593254 SENP7Q9BQF6 1050 aa15.15■□□□□ 0.02
H3F3B-213ENST00000593254 SNX14Q9Y5W7 946 aa15.15■□□□□ 0.02
H3F3B-213ENST00000593254 TECTAO75443 2155 aa15.14■□□□□ 0.01
H3F3B-213ENST00000593254 KLF18A0A0U1RQI7 1052 aa15.14■□□□□ 0.01
H3F3B-213ENST00000593254 GOLGA8AA7E2F4 631 aa15.14■□□□□ 0.01
H3F3B-213ENST00000593254 GOLGA8BA8MQT2 603 aa15.14■□□□□ 0.01
H3F3B-213ENST00000593254 LGALS2P05162 132 aa15.14■□□□□ 0.01
H3F3B-213ENST00000593254 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
H3F3B-213ENST00000593254 COL19A1Q14993 1142 aa15.14■□□□□ 0.01
H3F3B-213ENST00000593254 CSPP1Q1MSJ5 1256 aa15.14■□□□□ 0.01
H3F3B-213ENST00000593254 WWC2Q6AWC2 1192 aa15.14■□□□□ 0.01
H3F3B-213ENST00000593254 CYFIP1Q7L576 1253 aa15.14■□□□□ 0.01
H3F3B-213ENST00000593254 GPRASP2Q96D09 838 aa15.14■□□□□ 0.01
H3F3B-213ENST00000593254 MRPL38Q96DV4 380 aaKnown RBP15.14■□□□□ 0.01
H3F3B-213ENST00000593254 SNX27Q96L92 541 aa15.14■□□□□ 0.01
H3F3B-213ENST00000593254 FAM217BQ9NTX9 383 aaPredicted RBP15.14■□□□□ 0.01
H3F3B-213ENST00000593254 CACNA1HO95180 2353 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 C19orf67A6NJJ6 358 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 SPDYE3A6NKU9 549 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 H3BRB1 525 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 NOP56O00567 594 aaKnown RBP15.13■□□□□ 0.01
H3F3B-213ENST00000593254 REC8O95072 547 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 CPA1P15085 419 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 CDC27P30260 824 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 HOXC8P31273 242 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 ZP2Q05996 745 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 PTK7Q13308 1070 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 HIC1Q14526 733 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 TYW1BQ6NUM6 668 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 PPP1R18Q6NYC8 613 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 NLRX1Q86UT6 975 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 TEX2Q8IWB9 1127 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 FBXO22Q8NEZ5 403 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 JAKMIP1Q96N16 626 aaKnown RBP15.13■□□□□ 0.01
H3F3B-213ENST00000593254 GPR20Q99678 358 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 C17orf80Q9BSJ5 609 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 USP26Q9BXU7 913 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 TUT1Q9H6E5 874 aaKnown RBP15.13■□□□□ 0.01
H3F3B-213ENST00000593254 INSL6Q9Y581 213 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 ZDBF2Q9HCK1 2354 aa15.13■□□□□ 0.01
H3F3B-213ENST00000593254 NID2Q14112 1375 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 NLRC5Q86WI3 1866 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 ATG2AQ2TAZ0 1938 aa15.12■□□□□ 0.01
H3F3B-213ENST00000593254 H3BQ06 376 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms