RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 FOSP01100 380 aaPredicted RBP15.21■□□□□ 0.03
APOC1-209ENST00000592885 UBE2SQ16763 222 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 TCTN1Q2MV58 587 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 FAM26DQ5JW98 314 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 UTP14CQ5TAP6 766 aaKnown RBP15.21■□□□□ 0.03
APOC1-209ENST00000592885 WWC2Q6AWC2 1192 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 TAF2Q6P1X5 1199 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 RAB11FIP4Q86YS3 637 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 MICALL1Q8N3F8 863 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 CCDC82Q8N4S0 544 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 IL27Q8NEV9 243 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 DBF4BQ8NFT6 615 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 SEPT1Q8WYJ6 367 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 SEPT8Q92599 483 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 RIC8AQ9NPQ8 531 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 JADE2Q9NQC1 790 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 SETD4Q9NVD3 440 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 ERAP1Q9NZ08 941 aa15.21■□□□□ 0.03
APOC1-209ENST00000592885 TTC28Q96AY4 2481 aa15.21■□□□□ 0.02
APOC1-209ENST00000592885 TRANK1O15050 2925 aa15.2■□□□□ 0.02
APOC1-209ENST00000592885 LCHNA4D1U4 455 aa15.2■□□□□ 0.02
APOC1-209ENST00000592885 NAPAP54920 295 aa15.2■□□□□ 0.02
APOC1-209ENST00000592885 ERVK-21P61565 698 aa15.2■□□□□ 0.02
APOC1-209ENST00000592885 ARHGAP4P98171 946 aa15.2■□□□□ 0.02
APOC1-209ENST00000592885 SP4Q02446 784 aa15.2■□□□□ 0.02
APOC1-209ENST00000592885 FUT2Q10981 343 aa15.2■□□□□ 0.02
APOC1-209ENST00000592885 GRB10Q13322 594 aa15.2■□□□□ 0.02
APOC1-209ENST00000592885 AP3B2Q13367 1082 aa15.2■□□□□ 0.02
APOC1-209ENST00000592885 TGS1Q96RS0 853 aaKnown RBP15.2■□□□□ 0.02
APOC1-209ENST00000592885 SMARCAD1Q9H4L7 1026 aa15.2■□□□□ 0.02
APOC1-209ENST00000592885 CERS4Q9HA82 394 aa15.2■□□□□ 0.02
APOC1-209ENST00000592885 COG5Q9UP83 839 aa15.2■□□□□ 0.02
APOC1-209ENST00000592885 INSL6Q9Y581 213 aa15.2■□□□□ 0.02
APOC1-209ENST00000592885 NID2Q14112 1375 aa15.2■□□□□ 0.02
APOC1-209ENST00000592885 NFASCO94856 1347 aa15.19■□□□□ 0.02
APOC1-209ENST00000592885 PRRC2BQ5JSZ5 2229 aaKnown RBP15.19■□□□□ 0.02
APOC1-209ENST00000592885 hCG_1642624A0A1W2PR95 340 aa15.19■□□□□ 0.02
APOC1-209ENST00000592885 GOLGA8AA7E2F4 631 aa15.19■□□□□ 0.02
APOC1-209ENST00000592885 GOLGA8BA8MQT2 603 aa15.19■□□□□ 0.02
APOC1-209ENST00000592885 TNFRSF10AO00220 468 aa15.19■□□□□ 0.02
APOC1-209ENST00000592885 RFXAPO00287 272 aa15.19■□□□□ 0.02
APOC1-209ENST00000592885 ATP9AO75110 1047 aa15.19■□□□□ 0.02
APOC1-209ENST00000592885 ADCY7P51828 1080 aa15.19■□□□□ 0.02
APOC1-209ENST00000592885 HTRA4P83105 476 aaPredicted RBP15.19■□□□□ 0.02
APOC1-209ENST00000592885 PPFIA1Q13136 1202 aa15.19■□□□□ 0.02
APOC1-209ENST00000592885 RSPH3Q86UC2 560 aa15.19■□□□□ 0.02
APOC1-209ENST00000592885 RASEFQ8IZ41 740 aa15.19■□□□□ 0.02
APOC1-209ENST00000592885 SP7Q8TDD2 431 aaPredicted RBP15.19■□□□□ 0.02
APOC1-209ENST00000592885 TNPO1Q92973 898 aaKnown RBP15.19■□□□□ 0.02
APOC1-209ENST00000592885 SAMD11Q96NU1 681 aa15.19■□□□□ 0.02
APOC1-209ENST00000592885 JPH1Q9HDC5 661 aaPredicted RBP15.19■□□□□ 0.02
APOC1-209ENST00000592885 BARHL2Q9NY43 387 aa15.19■□□□□ 0.02
APOC1-209ENST00000592885 BRPF3Q9ULD4 1205 aa15.19■□□□□ 0.02
APOC1-209ENST00000592885 RALGAPA2Q2PPJ7 1873 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 KLF18A0A0U1RQI7 1052 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 CCDC196A0A1B0GTZ2 297 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 GSTTP1A0A1W2PQM5 241 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 MBLAC1A4D2B0 266 aaPredicted RBP15.18■□□□□ 0.02
APOC1-209ENST00000592885 LINC01553A4QN01 128 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 LPXNO60711 386 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 CTSHP09668 335 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 ADCK5Q3MIX3 580 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 MCTP2Q6DN12 878 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 TMCO2Q7Z6W1 182 aaPredicted RBP15.18■□□□□ 0.02
APOC1-209ENST00000592885 MYOCDQ8IZQ8 938 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 ADAMTS19Q8TE59 1207 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 KCNB2Q92953 911 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 MXRA8Q9BRK3 442 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 SLC9A2Q9UBY0 812 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 TUBE1Q9UJT0 475 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 TELO2Q9Y4R8 837 aa15.18■□□□□ 0.02
APOC1-209ENST00000592885 RRN3P2A6NIE6 340 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 STXBP3O00186 592 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 SREBF1P36956 1147 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 CLK2P49760 499 aaKnown RBP15.17■□□□□ 0.02
APOC1-209ENST00000592885 SKIV2LQ15477 1246 aaKnown RBP15.17■□□□□ 0.02
APOC1-209ENST00000592885 GRIK4Q16099 956 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 TYW1BQ6NUM6 668 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.17■□□□□ 0.022e-6■■□□□ 11.9
APOC1-209ENST00000592885 NIPA1Q7RTP0 329 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 SKAP1Q86WV1 359 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 FBXL16Q8N461 479 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 GLG1Q92896 1179 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 TOP1MTQ969P6 601 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 TCEANC2Q96MN5 208 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 SDF4Q9BRK5 362 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 ANO3Q9BYT9 981 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 IFIH1Q9BYX4 1025 aaKnown RBP15.17■□□□□ 0.02
APOC1-209ENST00000592885 AZI2Q9H6S1 392 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 KCNH7Q9NS40 1196 aa15.17■□□□□ 0.02
APOC1-209ENST00000592885 NLRC5Q86WI3 1866 aa15.16■□□□□ 0.02
APOC1-209ENST00000592885 ESYT2A0FGR8 921 aa15.16■□□□□ 0.02
APOC1-209ENST00000592885 METAP2P50579 478 aaKnown RBP eCLIP15.16■□□□□ 0.02
APOC1-209ENST00000592885 FGD1P98174 961 aa15.16■□□□□ 0.02
APOC1-209ENST00000592885 MGAT3Q09327 533 aa15.16■□□□□ 0.02
APOC1-209ENST00000592885 CEP55Q53EZ4 464 aa15.16■□□□□ 0.02
APOC1-209ENST00000592885 SPRED2Q7Z698 418 aa15.16■□□□□ 0.02
APOC1-209ENST00000592885 GDPD5Q8WTR4 605 aa15.16■□□□□ 0.02
APOC1-209ENST00000592885 CCDC12Q8WUD4 166 aaPredicted RBP15.16■□□□□ 0.02
APOC1-209ENST00000592885 UHRF1Q96T88 793 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms