RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 FAM184BQ9ULE4 1060 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.31■□□□□ 0.521e-8■■□□□ 13
PRKCSH-217ENST00000592741 TCP10L2B9ZVM9 353 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 OPLAHO14841 1288 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 MSH4O15457 936 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 TAL1P17542 331 aaPredicted RBP18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 FAM193AP78312 1265 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 TXLNBQ8N3L3 684 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 RPGRIP1Q96KN7 1286 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 GOPCQ9HD26 462 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 PSME4Q14997 1843 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 MEIS1O00470 390 aa18.3■□□□□ 0.52
PRKCSH-217ENST00000592741 CETN3O15182 167 aa18.3■□□□□ 0.52
PRKCSH-217ENST00000592741 TACC1O75410 805 aa18.3■□□□□ 0.52
PRKCSH-217ENST00000592741 SPATA31C1P0DKV0 1188 aa18.3■□□□□ 0.52
PRKCSH-217ENST00000592741 PABPC4Q13310 644 aaKnown RBP eCLIP18.3■□□□□ 0.529e-9■■□□□ 13.4
PRKCSH-217ENST00000592741 GIT2Q14161 759 aa18.3■□□□□ 0.52
PRKCSH-217ENST00000592741 ZNF771Q7L3S4 317 aaPredicted RBP18.3■□□□□ 0.52
PRKCSH-217ENST00000592741 TRIM59Q8IWR1 403 aa18.3■□□□□ 0.52
PRKCSH-217ENST00000592741 CCDC155Q8N6L0 562 aa18.3■□□□□ 0.52
PRKCSH-217ENST00000592741 NOA1Q8NC60 698 aaKnown RBP18.3■□□□□ 0.52
PRKCSH-217ENST00000592741 TRIM58Q8NG06 486 aa18.3■□□□□ 0.52
PRKCSH-217ENST00000592741 LSM14BQ9BX40 385 aaKnown RBP18.3■□□□□ 0.52
PRKCSH-217ENST00000592741 SH2D4AQ9H788 454 aa18.3■□□□□ 0.52
PRKCSH-217ENST00000592741 VAV3Q9UKW4 847 aa18.3■□□□□ 0.52
PRKCSH-217ENST00000592741 DUSP10Q9Y6W6 482 aa18.3■□□□□ 0.52
PRKCSH-217ENST00000592741 SSU72P8A0A1W2PR75 194 aa18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 SPDYE2BA6NHP3 402 aa18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 SPDYE6P0CI01 402 aa18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 PSMC6P62333 389 aa18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 ADAM9Q13443 819 aa18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 UBXN6Q9BZV1 441 aa18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 C21orf2O43822 256 aa18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 EPS15P42566 896 aa18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 ECE1P42892 770 aa18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 BEND6Q5SZJ8 279 aaPredicted RBP18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 RSBN1LQ6PCB5 846 aaPredicted RBP18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 SYN2Q92777 582 aaPredicted RBP18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 REEP2Q9BRK0 252 aa18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 POLR3CQ9BUI4 534 aaPredicted RBP18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 HDAC9Q9UKV0 1011 aa18.29■□□□□ 0.52
PRKCSH-217ENST00000592741 SRGAP2O75044 1071 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 SMC1AQ14683 1233 aaKnown RBP18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 GRIPAP1Q4V328 841 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 SFMBT2Q5VUG0 894 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 CAGE1Q8TC20 777 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 FAM151AQ8WW52 585 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 PRDM4Q9UKN5 801 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 TMX2Q9Y320 296 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 CLRN2A0PK11 232 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 MAP2K7O14733 419 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 MAGEA1P43355 309 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 VSNL1P62760 191 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 DLGAP5Q15398 846 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 SLC15A2Q16348 729 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 SLC9C1Q4G0N8 1177 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 TDRD12Q587J7 1177 aaKnown RBP18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 FAM83BQ5T0W9 1011 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 HDXQ7Z353 690 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 SFR1Q86XK3 245 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 KCTD17Q8N5Z5 321 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 CAPZA3Q96KX2 299 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 ALS2CR12Q96Q35 445 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 MMS19Q96T76 1030 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 NLRC4Q9NPP4 1024 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 ZNF70Q9UC06 446 aaPredicted RBP18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 JRKLQ9Y4A0 524 aa18.28■□□□□ 0.52
PRKCSH-217ENST00000592741 CALUO43852 315 aaPredicted RBP18.27■□□□□ 0.52
PRKCSH-217ENST00000592741 NR2F2P24468 414 aa18.27■□□□□ 0.52
PRKCSH-217ENST00000592741 KNOP1Q1ED39 458 aaKnown RBP18.27■□□□□ 0.52
PRKCSH-217ENST00000592741 IQCEQ6IPM2 695 aa18.27■□□□□ 0.52
PRKCSH-217ENST00000592741 ACER1Q8TDN7 264 aa18.27■□□□□ 0.52
PRKCSH-217ENST00000592741 EIF2AK1Q9BQI3 630 aaKnown RBP18.27■□□□□ 0.52
PRKCSH-217ENST00000592741 ABCB6Q9NP58 842 aa18.27■□□□□ 0.52
PRKCSH-217ENST00000592741 JADE2Q9NQC1 790 aa18.27■□□□□ 0.52
PRKCSH-217ENST00000592741 ZBTB21Q9ULJ3 1066 aa18.27■□□□□ 0.52
PRKCSH-217ENST00000592741 TRAF3IP3Q9Y228 551 aa18.27■□□□□ 0.52
PRKCSH-217ENST00000592741 PJA2O43164 708 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 TBCAO75347 108 aaKnown RBP18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 NOL4O94818 638 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 EYA4O95677 639 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 SERPING1P05155 500 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 MCM3P25205 808 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 OAS2P29728 719 aaKnown RBP18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 CASP5P51878 434 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 USP14P54578 494 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 CYP4A11Q02928 519 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 ASTE1Q2TB18 679 aaPredicted RBP18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 HGSNATQ68CP4 663 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 WDR93Q6P2C0 686 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 EPM2AIP1Q7L775 607 aaPredicted RBP18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 CYP2W1Q8TAV3 490 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 EHMT1Q9H9B1 1298 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 MLXIPQ9HAP2 919 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 STK32BQ9NY57 414 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 RABGAP1Q9Y3P9 1069 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 ATAD5Q96QE3 1844 aa18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 GCOM1H8Y6P7 765 aaPredicted RBP18.26■□□□□ 0.51
PRKCSH-217ENST00000592741 CFBP00751 764 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms