RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 CMPK2Q5EBM0 449 aa6.57□□□□□ -1.36
NPC1-213ENST00000591955 LCE4AQ5TA78 99 aa6.57□□□□□ -1.36
NPC1-213ENST00000591955 HDGFL1Q5TGJ6 251 aa6.57□□□□□ -1.36
NPC1-213ENST00000591955 CWC27Q6UX04 472 aaKnown RBP6.57□□□□□ -1.36
NPC1-213ENST00000591955 CYP26C1Q6V0L0 522 aa6.57□□□□□ -1.36
NPC1-213ENST00000591955 CBLL1Q75N03 491 aa6.57□□□□□ -1.36
NPC1-213ENST00000591955 ZNF572Q7Z3I7 529 aaPredicted RBP6.57□□□□□ -1.36
NPC1-213ENST00000591955 CROCCP2Q86T23 111 aa6.57□□□□□ -1.36
NPC1-213ENST00000591955 DRAXINQ8NBI3 349 aaPredicted RBP6.57□□□□□ -1.36
NPC1-213ENST00000591955 CAVIN3Q969G5 261 aa6.57□□□□□ -1.36
NPC1-213ENST00000591955 MKL1Q969V6 931 aa6.57□□□□□ -1.36
NPC1-213ENST00000591955 ZNF274Q96GC6 653 aaPredicted RBP6.57□□□□□ -1.36
NPC1-213ENST00000591955 CCDC114Q96M63 670 aa6.57□□□□□ -1.36
NPC1-213ENST00000591955 GGNBP2Q9H3C7 697 aa6.57□□□□□ -1.36
NPC1-213ENST00000591955 KAT14Q9H8E8 782 aa6.57□□□□□ -1.36
NPC1-213ENST00000591955 CTNNAL1Q9UBT7 734 aa6.57□□□□□ -1.36
NPC1-213ENST00000591955 WWC3Q9ULE0 1092 aa6.57□□□□□ -1.36
NPC1-213ENST00000591955 LMO7Q8WWI1 1683 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 ENO4A6NNW6 628 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 E7ENQ6 273 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 PRC1O43663 620 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 KRT86O43790 486 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 SURF6O75683 361 aaKnown RBP6.56□□□□□ -1.36
NPC1-213ENST00000591955 CDKL5O76039 1030 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 ZNF202O95125 648 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 IFIT2P09913 472 aaKnown RBP6.56□□□□□ -1.36
NPC1-213ENST00000591955 PRLRP16471 622 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 LMOD1P29536 600 aaPredicted RBP6.56□□□□□ -1.36
NPC1-213ENST00000591955 SYKP43405 635 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 RPS6KA3P51812 740 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 VAV2P52735 878 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 ROR2Q01974 943 aaKnown RBP6.56□□□□□ -1.36
NPC1-213ENST00000591955 ST3GAL1Q11201 340 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 XRCC4Q13426 336 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 PDIA5Q14554 519 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 NAA25Q14CX7 972 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 CHRNA2Q15822 529 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 SPECC1Q5M775 1068 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 FBXW10Q5XX13 1052 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 TMEM132EQ6IEE7 984 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 CYB5D1Q6P9G0 228 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 CPLX2Q6PUV4 134 aaKnown RBP6.56□□□□□ -1.36
NPC1-213ENST00000591955 PTF1AQ7RTS3 328 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 CCDC13Q8IYE1 715 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 CMTR1Q8N1G2 835 aaKnown RBP6.56□□□□□ -1.36
NPC1-213ENST00000591955 MREGQ8N565 214 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 GBP7Q8N8V2 638 aaPredicted RBP6.56□□□□□ -1.36
NPC1-213ENST00000591955 TC2NQ8N9U0 490 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 KLHL23Q8NBE8 558 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 LINC00301Q8NCQ3 95 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 TRIM58Q8NG06 486 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 OR8K1Q8NGG5 319 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 GDAP1L1Q96MZ0 367 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 NEK1Q96PY6 1258 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 ALS2CR12Q96Q35 445 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 SPAG5Q96R06 1193 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 PNKPQ96T60 521 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 AGXT2Q9BYV1 514 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 EBF2Q9HAK2 575 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 INCENPQ9NQS7 918 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.56□□□□□ -1.36
NPC1-213ENST00000591955 ITGB1BP2Q9UKP3 347 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 SH3BP1Q9Y3L3 701 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 SAR1BQ9Y6B6 198 aa6.56□□□□□ -1.36
NPC1-213ENST00000591955 GRIN2DO15399 1336 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 SPATA31A1Q5TZJ5 1347 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 WDR19Q8NEZ3 1342 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 UTRNP46939 3433 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 LRRIQ3A6PVS8 624 aaPredicted RBP6.55□□□□□ -1.36
NPC1-213ENST00000591955 MFAP3LO75121 409 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 PPFIA2O75334 1257 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 VIMP08670 466 aaKnown RBP6.55□□□□□ -1.36
NPC1-213ENST00000591955 MYBL2P10244 700 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 IMPDH2P12268 514 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 ZNF18P17022 549 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 SCP2P22307 547 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 GCLCP48506 637 aaPredicted RBP6.55□□□□□ -1.36
NPC1-213ENST00000591955 NLRP5P59047 1200 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 AMPD2Q01433 879 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 FLIIQ13045 1269 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 MTA1Q13330 715 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 BIRC3Q13489 604 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 TOB2Q14106 344 aaPredicted RBP6.55□□□□□ -1.36
NPC1-213ENST00000591955 SAFB2Q14151 953 aaKnown RBP eCLIP6.55□□□□□ -1.36
NPC1-213ENST00000591955 RRS1Q15050 365 aaKnown RBP6.55□□□□□ -1.36
NPC1-213ENST00000591955 IFI16Q16666 785 aaKnown RBP6.55□□□□□ -1.36
NPC1-213ENST00000591955 ZNF569Q5MCW4 686 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 NT5DC1Q5TFE4 455 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 PAPD7Q5XG87 772 aaKnown RBP6.55□□□□□ -1.36
NPC1-213ENST00000591955 NAIF1Q69YI7 327 aaPredicted RBP6.55□□□□□ -1.36
NPC1-213ENST00000591955 CAPRIN2Q6IMN6 1127 aaKnown RBP6.55□□□□□ -1.36
NPC1-213ENST00000591955 TLDC1Q6P9B6 456 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 TXNDC11Q6PKC3 985 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 SLC30A9Q6PML9 568 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 LRIG3Q6UXM1 1119 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 CCNI2Q6ZMN8 369 aaPredicted RBP6.55□□□□□ -1.36
NPC1-213ENST00000591955 RUFY4Q6ZNE9 571 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.55□□□□□ -1.36
NPC1-213ENST00000591955 BEND4Q6ZU67 534 aa6.55□□□□□ -1.36
NPC1-213ENST00000591955 TRAPPC11Q7Z392 1133 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms