RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 ZNF365Q70YC5 407 aa18.66■□□□□ 0.58
CIRBP-233ENST00000591622 RPUSD2Q8IZ73 545 aaKnown RBP18.66■□□□□ 0.58
CIRBP-233ENST00000591622 CAGE1Q8TC20 777 aa18.66■□□□□ 0.58
CIRBP-233ENST00000591622 DHX38Q92620 1227 aaKnown RBP18.66■□□□□ 0.58
CIRBP-233ENST00000591622 ORC3Q9UBD5 711 aaPredicted RBP18.66■□□□□ 0.58
CIRBP-233ENST00000591622 MYH7BA7E2Y1 1941 aa18.66■□□□□ 0.58
CIRBP-233ENST00000591622 C17orf102A2RUQ5 167 aa18.65■□□□□ 0.58
CIRBP-233ENST00000591622 M0R2N6 131 aa18.65■□□□□ 0.58
CIRBP-233ENST00000591622 IPO5O00410 1097 aaKnown RBP18.65■□□□□ 0.58
CIRBP-233ENST00000591622 FGBP02675 491 aa18.65■□□□□ 0.58
CIRBP-233ENST00000591622 IQCF3P0C7M6 154 aa18.65■□□□□ 0.58
CIRBP-233ENST00000591622 XBP1P17861 261 aa18.65■□□□□ 0.58
CIRBP-233ENST00000591622 USP11P51784 963 aa18.65■□□□□ 0.58
CIRBP-233ENST00000591622 ACTR2P61160 394 aa18.65■□□□□ 0.58
CIRBP-233ENST00000591622 SETQ01105 290 aaPredicted RBP18.65■□□□□ 0.58
CIRBP-233ENST00000591622 AFAP1L1Q8TED9 768 aa18.65■□□□□ 0.58
CIRBP-233ENST00000591622 WASF1Q92558 559 aa18.65■□□□□ 0.58
CIRBP-233ENST00000591622 PHF20Q9BVI0 1012 aa18.65■□□□□ 0.58
CIRBP-233ENST00000591622 RNPEPQ9H4A4 650 aa18.65■□□□□ 0.58
CIRBP-233ENST00000591622 SMARCAD1Q9H4L7 1026 aa18.65■□□□□ 0.58
CIRBP-233ENST00000591622 KCNJ14Q9UNX9 436 aa18.65■□□□□ 0.58
CIRBP-233ENST00000591622 LIMCH1Q9UPQ0 1083 aa18.65■□□□□ 0.58
CIRBP-233ENST00000591622 SZT2Q5T011 3432 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 DHX15O43143 795 aaKnown RBP18.64■□□□□ 0.57
CIRBP-233ENST00000591622 EDIL3O43854 480 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 FDPSP14324 419 aaKnown RBP18.64■□□□□ 0.57
CIRBP-233ENST00000591622 RFC2P35250 354 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 RBL2Q08999 1139 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 PRR16Q569H4 304 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 RASIP1Q5U651 963 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 SERINC5Q86VE9 423 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 TBCKQ8TEA7 893 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 GLG1Q92896 1179 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 ATP6V0A1Q93050 837 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 VWCEQ96DN2 955 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 ZNF577Q9BSK1 485 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 SETD4Q9NVD3 440 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 ERAP1Q9NZ08 941 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 EMSYQ7Z589 1322 aa18.64■□□□□ 0.57
CIRBP-233ENST00000591622 LGR5O75473 907 aa18.63■□□□□ 0.57
CIRBP-233ENST00000591622 ATG7O95352 703 aa18.63■□□□□ 0.57
CIRBP-233ENST00000591622 PFKMP08237 780 aa18.63■□□□□ 0.57
CIRBP-233ENST00000591622 GNAT1P11488 350 aa18.63■□□□□ 0.57
CIRBP-233ENST00000591622 CKBP12277 381 aa18.63■□□□□ 0.57
CIRBP-233ENST00000591622 SELPP16109 830 aa18.63■□□□□ 0.57
CIRBP-233ENST00000591622 TRIM71Q2Q1W2 868 aaKnown RBP18.63■□□□□ 0.57
CIRBP-233ENST00000591622 NSUN7Q8NE18 718 aaKnown RBP18.63■□□□□ 0.57
CIRBP-233ENST00000591622 HERVK_113Q902F9 699 aa18.63■□□□□ 0.57
CIRBP-233ENST00000591622 LENG9Q96B70 501 aa18.63■□□□□ 0.57
CIRBP-233ENST00000591622 PCYT2Q99447 389 aa18.63■□□□□ 0.57
CIRBP-233ENST00000591622 AZI2Q9H6S1 392 aa18.63■□□□□ 0.57
CIRBP-233ENST00000591622 GJB4Q9NTQ9 266 aa18.63■□□□□ 0.57
CIRBP-233ENST00000591622 TBC1D22BQ9NU19 505 aa18.63■□□□□ 0.57
CIRBP-233ENST00000591622 LAMA2P24043 3122 aaKnown RBP18.62■□□□□ 0.57
CIRBP-233ENST00000591622 DDX39AO00148 427 aaKnown RBP18.62■□□□□ 0.57
CIRBP-233ENST00000591622 TREHO43280 583 aa18.62■□□□□ 0.57
CIRBP-233ENST00000591622 CCNE2O96020 404 aa18.62■□□□□ 0.57
CIRBP-233ENST00000591622 SMAD3P84022 425 aaKnown RBP18.62■□□□□ 0.57
CIRBP-233ENST00000591622 LRRC8DQ7L1W4 858 aa18.62■□□□□ 0.57
CIRBP-233ENST00000591622 KRT25Q7Z3Z0 450 aa18.62■□□□□ 0.57
CIRBP-233ENST00000591622 DEFB128Q7Z7B8 93 aa18.62■□□□□ 0.57
CIRBP-233ENST00000591622 WNT8BQ93098 351 aa18.62■□□□□ 0.57
CIRBP-233ENST00000591622 UIMC1Q96RL1 719 aa18.62■□□□□ 0.57
CIRBP-233ENST00000591622 UPF2Q9HAU5 1272 aaKnown RBP18.62■□□□□ 0.57
CIRBP-233ENST00000591622 NRCAMQ92823 1304 aa18.62■□□□□ 0.57
CIRBP-233ENST00000591622 DOCK5Q9H7D0 1870 aa18.62■□□□□ 0.57
CIRBP-233ENST00000591622 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.61■□□□□ 0.57
CIRBP-233ENST00000591622 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.61■□□□□ 0.57
CIRBP-233ENST00000591622 MARK3P27448 753 aa18.61■□□□□ 0.57
CIRBP-233ENST00000591622 ADAM17P78536 824 aa18.61■□□□□ 0.57
CIRBP-233ENST00000591622 ST3GAL1Q11201 340 aa18.61■□□□□ 0.57
CIRBP-233ENST00000591622 NONOQ15233 471 aaKnown RBP eCLIP18.61■□□□□ 0.57
CIRBP-233ENST00000591622 OTOP2Q7RTS6 562 aa18.61■□□□□ 0.57
CIRBP-233ENST00000591622 PLPPR4Q7Z2D5 763 aa18.61■□□□□ 0.57
CIRBP-233ENST00000591622 LMBR1Q8WVP7 490 aa18.61■□□□□ 0.57
CIRBP-233ENST00000591622 MTIF3Q9H2K0 278 aaKnown RBP18.61■□□□□ 0.57
CIRBP-233ENST00000591622 CYP3A7-CYP3A51PA0A087WV96 503 aa18.6■□□□□ 0.57
CIRBP-233ENST00000591622 IGKV6D-21A0A0A0MT36 114 aa18.6■□□□□ 0.57
CIRBP-233ENST00000591622 JAK2O60674 1132 aa18.6■□□□□ 0.57
CIRBP-233ENST00000591622 PARNO95453 639 aaKnown RBP18.6■□□□□ 0.57
CIRBP-233ENST00000591622 CYP3A7P24462 503 aa18.6■□□□□ 0.57
CIRBP-233ENST00000591622 STAT5BP51692 787 aa18.6■□□□□ 0.57
CIRBP-233ENST00000591622 PPFIA1Q13136 1202 aa18.6■□□□□ 0.57
CIRBP-233ENST00000591622 ZNF618Q5T7W0 954 aa18.6■□□□□ 0.57
CIRBP-233ENST00000591622 ABHD15Q6UXT9 468 aa18.6■□□□□ 0.57
CIRBP-233ENST00000591622 ZSCAN31Q96LW9 406 aaPredicted RBP18.6■□□□□ 0.57
CIRBP-233ENST00000591622 CXXC1Q9P0U4 656 aaPredicted RBP18.6■□□□□ 0.57
CIRBP-233ENST00000591622 CCDC194A0A1B0GVG4 234 aa18.59■□□□□ 0.57
CIRBP-233ENST00000591622 MSH4O15457 936 aa18.59■□□□□ 0.57
CIRBP-233ENST00000591622 THPOP40225 353 aa18.59■□□□□ 0.57
CIRBP-233ENST00000591622 SLC26A2P50443 739 aa18.59■□□□□ 0.57
CIRBP-233ENST00000591622 KRT76Q01546 638 aa18.59■□□□□ 0.57
CIRBP-233ENST00000591622 GPNMBQ14956 572 aa18.59■□□□□ 0.57
CIRBP-233ENST00000591622 RABEP1Q15276 862 aa18.59■□□□□ 0.57
CIRBP-233ENST00000591622 INF2Q27J81 1249 aa18.59■□□□□ 0.57
CIRBP-233ENST00000591622 Q4G0T1 1027 aa18.59■□□□□ 0.57
CIRBP-233ENST00000591622 FAM109BQ6ICB4 259 aaPredicted RBP18.59■□□□□ 0.57
CIRBP-233ENST00000591622 ZNF746Q6NUN9 644 aaPredicted RBP18.59■□□□□ 0.57
CIRBP-233ENST00000591622 TRAF7Q6Q0C0 670 aa18.59■□□□□ 0.57
CIRBP-233ENST00000591622 MOXD1Q6UVY6 613 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms