RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 BMP15O95972 392 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 GYPCP04921 128 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 HNRNPCP07910 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 HOXD12P35452 270 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 KLC1Q07866 573 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 SEPT2Q15019 361 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 SMUG1Q53HV7 270 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 CCDC70Q6NSX1 233 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 RASGRP2Q7LDG7 609 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 TRAPPC11Q7Z392 1133 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 DZIP1Q86YF9 867 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 TMTC1Q8IUR5 882 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 TJP1Q07157 1748 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 FGFR2P21802 821 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 UBXN1Q04323 297 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 KRT31Q15323 416 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 GLE1Q53GS7 698 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 ZNF365Q70YC5 407 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 SH3GLB1Q9Y371 365 aa13.34□□□□□ -0.27
SMARCA4-217ENST00000591595 NDUFB5O43674 189 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 GSTA1P08263 222 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 GSTT1P30711 240 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 IFI16Q16666 785 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 P3H1Q32P28 736 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 SESTD1Q86VW0 696 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 ENAHQ8N8S7 591 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 PRCCQ92733 491 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 CLIP3Q96DZ5 547 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 CAPZA3Q96KX2 299 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 ZSCAN10Q96SZ4 725 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 MTMR7Q9Y216 660 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 WNT7AO00755 349 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 TRIM37O94972 964 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 HOXA10P31260 410 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 PSMD7P51665 324 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 DPYDQ12882 1025 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 PAK1Q13153 545 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 CLPPQ16740 277 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 SPATA20Q8TB22 786 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 ZNF653Q96CK0 615 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 LAMB4A4D0S4 1761 aa13.33□□□□□ -0.28
SMARCA4-217ENST00000591595 PPP1R3GB7ZBB8 358 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 TRAPPC3O43617 180 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 CYP19A1P11511 503 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 MLH1P40692 756 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 CKAP4Q07065 602 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 CYP26C1Q6V0L0 522 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 BRINP3Q76B58 766 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 IFT43Q96FT9 208 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 KCNMB3Q9NPA1 279 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 CIDEBQ9UHD4 219 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 SLC12A4Q9UP95 1085 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 N6AMT1Q9Y5N5 214 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 SOS2Q07890 1332 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 C5orf60A6NFR6 353 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 CCT8L1PA6NM43 557 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 P4HA2O15460 535 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 HNRNPRO43390 633 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 NAT2P11245 290 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 HPDP32754 393 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 SPAG1Q07617 926 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 FOXD4Q12950 439 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 CCDC152Q4G0S7 254 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 APTXQ7Z2E3 356 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 NELFBQ8WX92 580 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 NR1H4Q96RI1 486 aaPredicted RBP13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 ALS2Q96Q42 1657 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 TRIM43BA6NCK2 446 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 TRIM21P19474 475 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 COPB1P53618 953 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 EPHB4P54760 987 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 SH2D4BQ5SQS7 431 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 CDKAL1Q5VV42 579 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 SUSD4Q5VX71 490 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 FOXB2Q5VYV0 432 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 LONP2Q86WA8 852 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 CAGE1Q8TC20 777 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 CCDC51Q96ER9 411 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 ABHD10Q9NUJ1 306 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 SPO11Q9Y5K1 396 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 C4AP0C0L4 1744 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 C4BP0C0L5 1744 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 PNPLA7Q6ZV29 1317 aa13.32□□□□□ -0.28
SMARCA4-217ENST00000591595 KCNJ18B7U540 433 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 BACH1O14867 736 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 HOXD11P31277 338 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 GYG1P46976 350 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 KCNJ12Q14500 433 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 PPP2R5BQ15173 497 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 OR52E8Q6IFG1 317 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 EMBQ6PCB8 327 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 ARFGAP2Q8N6H7 521 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 PCMTD1Q96MG8 357 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 PHF20Q9BVI0 1012 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 RABL2AQ9UBK7 228 aaPredicted RBP13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 GLI3P10071 1580 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 TMEM247A6NEH6 219 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 ENC1O14682 589 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 BCRP11274 1271 aa13.31□□□□□ -0.28
SMARCA4-217ENST00000591595 ALDH5A1P51649 535 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms