RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 UNC45AQ9H3U1 944 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 SPC25Q9HBM1 224 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 OGDHLQ9ULD0 1010 aa13.6□□□□□ -0.23
APOC1-206ENST00000590334 IGKV6D-21A0A0A0MT36 114 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 PPFIA4O75335 1185 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 SGPL1O95470 568 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 PGK1P00558 417 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 MMP3P08254 477 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 GJA8P48165 433 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 JAK3P52333 1124 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 ACTR2P61160 394 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 CEBPZQ03701 1054 aaKnown RBP13.59□□□□□ -0.23
APOC1-206ENST00000590334 FSCN1Q16658 493 aaKnown RBP13.59□□□□□ -0.23
APOC1-206ENST00000590334 TMEM266Q2M3C6 531 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 ABHD15Q6UXT9 468 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 CLEC17AQ6ZS10 378 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 KCNG4Q8TDN1 519 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 SEPT1Q8WYJ6 367 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 TNPO1Q92973 898 aaKnown RBP13.59□□□□□ -0.23
APOC1-206ENST00000590334 FERMT2Q96AC1 680 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 SCAND2PQ9GZW5 306 aaPredicted RBP13.59□□□□□ -0.23
APOC1-206ENST00000590334 TCEAL9Q9UHQ7 104 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 FBXO2Q9UK22 296 aaPredicted RBP13.59□□□□□ -0.23
APOC1-206ENST00000590334 TELO2Q9Y4R8 837 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 SRPRBQ9Y5M8 271 aaKnown RBP13.59□□□□□ -0.23
APOC1-206ENST00000590334 SCN10AQ9Y5Y9 1956 aa13.59□□□□□ -0.23
APOC1-206ENST00000590334 MYADML2A6NDP7 307 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 WDR64B1ANS9 1081 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 DDX39AO00148 427 aaKnown RBP13.58□□□□□ -0.24
APOC1-206ENST00000590334 NOP56O00567 594 aaKnown RBP13.58□□□□□ -0.24
APOC1-206ENST00000590334 SPTLC2O15270 562 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 SORBS3O60504 671 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 KPNA6O60684 536 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 LGR5O75473 907 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 MYCP01106 439 aaPredicted RBP13.58□□□□□ -0.24
APOC1-206ENST00000590334 C6orf222P0C671 652 aaPredicted RBP13.58□□□□□ -0.24
APOC1-206ENST00000590334 TECP42680 631 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 IRX5P78411 483 aaPredicted RBP13.58□□□□□ -0.24
APOC1-206ENST00000590334 STK38Q15208 465 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 LRRC41Q15345 812 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 DGKDQ16760 1214 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 BRDTQ58F21 947 aaPredicted RBP13.58□□□□□ -0.24
APOC1-206ENST00000590334 RNF180Q86T96 592 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 ARRDC4Q8NCT1 418 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 U2AF1L4Q8WU68 220 aaKnown RBP13.58□□□□□ -0.24
APOC1-206ENST00000590334 LEO1Q8WVC0 666 aaPredicted RBP13.58□□□□□ -0.24
APOC1-206ENST00000590334 CHAMP1Q96JM3 812 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 TSEN34Q9BSV6 310 aaKnown RBP13.58□□□□□ -0.24
APOC1-206ENST00000590334 RAB34Q9BZG1 259 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 PCDHA10Q9Y5I2 948 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 EMSYQ7Z589 1322 aa13.58□□□□□ -0.24
APOC1-206ENST00000590334 VWA3AA6NCI4 1184 aa13.57□□□□□ -0.24
APOC1-206ENST00000590334 EML1O00423 815 aa13.57□□□□□ -0.24
APOC1-206ENST00000590334 PSAPP07602 524 aa13.57□□□□□ -0.24
APOC1-206ENST00000590334 SUPT20HL2P0C7V6 817 aa13.57□□□□□ -0.24
APOC1-206ENST00000590334 MARCKSP29966 332 aaPredicted RBP13.57□□□□□ -0.24
APOC1-206ENST00000590334 TCF7P36402 384 aaPredicted RBP13.57□□□□□ -0.24
APOC1-206ENST00000590334 LONP1P36776 959 aaKnown RBP13.57□□□□□ -0.24
APOC1-206ENST00000590334 BEX3Q00994 111 aa13.57□□□□□ -0.24
APOC1-206ENST00000590334 EPHA7Q15375 998 aa13.57□□□□□ -0.24
APOC1-206ENST00000590334 GNASQ5JWF2 1037 aa13.57□□□□□ -0.24
APOC1-206ENST00000590334 MIER3Q7Z3K6 550 aa13.57□□□□□ -0.24
APOC1-206ENST00000590334 KRI1Q8N9T8 703 aaKnown RBP13.57□□□□□ -0.24
APOC1-206ENST00000590334 ANKLE1Q8NAG6 615 aa13.57□□□□□ -0.24
APOC1-206ENST00000590334 PCSK9Q8NBP7 692 aaKnown RBP13.57□□□□□ -0.24
APOC1-206ENST00000590334 AFAP1L1Q8TED9 768 aa13.57□□□□□ -0.24
APOC1-206ENST00000590334 AK8Q96MA6 479 aa13.57□□□□□ -0.24
APOC1-206ENST00000590334 DISC1Q9NRI5 854 aa13.57□□□□□ -0.24
APOC1-206ENST00000590334 STK24Q9Y6E0 443 aa13.57□□□□□ -0.24
APOC1-206ENST00000590334 MOXD2PA6NHM9 499 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 POTEMA6NI47 508 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 DNM1LO00429 736 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 CHMP2AO43633 222 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 ZEB2O60315 1214 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 NCLP19338 710 aaKnown RBP13.56□□□□□ -0.24
APOC1-206ENST00000590334 PURAQ00577 322 aaKnown RBP13.56□□□□□ -0.24
APOC1-206ENST00000590334 SP4Q02446 784 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 KCNA10Q16322 511 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 NCAPH2Q6IBW4 605 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 MIS18BP1Q6P0N0 1132 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 PLPPR4Q7Z2D5 763 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 ZNF579Q8NAF0 562 aaKnown RBP13.56□□□□□ -0.24
APOC1-206ENST00000590334 NEK9Q8TD19 979 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 SPATA32Q96LK8 384 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 PCYT2Q99447 389 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 HSD17B14Q9BPX1 270 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 C16orf70Q9BSU1 422 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 TMEM106CQ9BVX2 250 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 LRWD1Q9UFC0 647 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 MAFBQ9Y5Q3 323 aaPredicted RBP13.56□□□□□ -0.24
APOC1-206ENST00000590334 IGSF9BQ9UPX0 1349 aa13.56□□□□□ -0.24
APOC1-206ENST00000590334 SLC26A4O43511 780 aa13.55□□□□□ -0.24
APOC1-206ENST00000590334 CUTAO60888 179 aa13.55□□□□□ -0.24
APOC1-206ENST00000590334 F2P00734 622 aa13.55□□□□□ -0.24
APOC1-206ENST00000590334 TFRCP02786 760 aaKnown RBP13.55□□□□□ -0.24
APOC1-206ENST00000590334 LGALS2P05162 132 aa13.55□□□□□ -0.24
APOC1-206ENST00000590334 ASGR1P07306 291 aa13.55□□□□□ -0.24
APOC1-206ENST00000590334 MUTP22033 750 aa13.55□□□□□ -0.24
APOC1-206ENST00000590334 MNX1P50219 401 aaPredicted RBP13.55□□□□□ -0.24
APOC1-206ENST00000590334 SLC26A2P50443 739 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms