RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 TJAP1Q5JTD0 557 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 ZNF618Q5T7W0 954 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 TAF2Q6P1X5 1199 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 TRAF7Q6Q0C0 670 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 FAM43BQ6ZT52 329 aaPredicted RBP8.7□□□□□ -1.02
NPC1-208ENST00000590301 RPAINQ86UA6 219 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 RASEFQ8IZ41 740 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 CMTR1Q8N1G2 835 aaKnown RBP8.7□□□□□ -1.02
NPC1-208ENST00000590301 FBXL16Q8N461 479 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 CCDC82Q8N4S0 544 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 SEPT1Q8WYJ6 367 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 ZFP91Q96JP5 570 aaPredicted RBP8.7□□□□□ -1.02
NPC1-208ENST00000590301 RAD9AQ99638 391 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 ZBED2Q9BTP6 218 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 COL25A1Q9BXS0 654 aaPredicted RBP8.7□□□□□ -1.02
NPC1-208ENST00000590301 RNPEPQ9H4A4 650 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 JADE2Q9NQC1 790 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 BARHL2Q9NY43 387 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 ERAP1Q9NZ08 941 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 THEGQ9P2T0 379 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 PCDHA6Q9UN73 950 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 PCDHA8Q9Y5H6 950 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 CNTNAP5Q8WYK1 1306 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 SCN10AQ9Y5Y9 1956 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.69□□□□□ -1.02
NPC1-208ENST00000590301 SORBS3O60504 671 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 GJB5O95377 273 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 AMHP03971 560 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 MYOGP15173 224 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 PSMA5P28066 241 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 HSPA4P34932 840 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 TCF7P36402 384 aaPredicted RBP8.69□□□□□ -1.02
NPC1-208ENST00000590301 METAP2P50579 478 aaKnown RBP eCLIP8.69□□□□□ -1.02
NPC1-208ENST00000590301 ADAM17P78536 824 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 ZNF200P98182 395 aaPredicted RBP8.69□□□□□ -1.02
NPC1-208ENST00000590301 TAP1Q03518 808 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 COL9A3Q14050 684 aaPredicted RBP8.69□□□□□ -1.02
NPC1-208ENST00000590301 MBTPS1Q14703 1052 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 UBE2SQ16763 222 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 ADCK5Q3MIX3 580 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 CEP55Q53EZ4 464 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 WWC2Q6AWC2 1192 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 NIPA1Q7RTP0 329 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 RSPH3Q86UC2 560 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 CCDC12Q8WUD4 166 aaPredicted RBP8.69□□□□□ -1.02
NPC1-208ENST00000590301 SEPT8Q92599 483 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 APBB2Q92870 758 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 SMARCAD1Q9H4L7 1026 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 JPH1Q9HDC5 661 aaPredicted RBP8.69□□□□□ -1.02
NPC1-208ENST00000590301 SETD4Q9NVD3 440 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 BRPF3Q9ULD4 1205 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 V9GY48 417 aaPredicted RBP8.69□□□□□ -1.02
NPC1-208ENST00000590301 MCM3APO60318 1980 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 UNC80Q8N2C7 3258 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 TTC28Q96AY4 2481 aa8.69□□□□□ -1.02
NPC1-208ENST00000590301 hCG_1642624A0A1W2PR95 340 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 ESYT2A0FGR8 921 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 SMCO2A6NFE2 343 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 RRN3P2A6NIE6 340 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 STXBP3O00186 592 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 TREHO43280 583 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 ATP9AO75110 1047 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 SREBF1P36956 1147 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 SLC26A2P50443 739 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 MRPS5P82675 430 aaKnown RBP8.68□□□□□ -1.02
NPC1-208ENST00000590301 ARHGAP4P98171 946 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 PPFIA1Q13136 1202 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 HIC1Q14526 733 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 AAK1Q2M2I8 961 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 PLEKHG4Q58EX7 1191 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 FAM26DQ5JW98 314 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 UTP14CQ5TAP6 766 aaKnown RBP8.68□□□□□ -1.02
NPC1-208ENST00000590301 BLOC1S2Q6QNY1 142 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 TRIM50Q86XT4 487 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 RAB11FIP4Q86YS3 637 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 USP38Q8NB14 1042 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 LMBR1Q8WVP7 490 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 GLG1Q92896 1179 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 WNT8BQ93098 351 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 MXRA8Q9BRK3 442 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 SDF4Q9BRK5 362 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 AZI2Q9H6S1 392 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 BCAS3Q9H6U6 928 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 KCNH7Q9NS40 1196 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 LMCD1Q9NZU5 365 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 INSL6Q9Y581 213 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 NFASCO94856 1347 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 NID2Q14112 1375 aa8.68□□□□□ -1.02
NPC1-208ENST00000590301 GSTTP1A0A1W2PQM5 241 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 MBLAC1A4D2B0 266 aaPredicted RBP8.67□□□□□ -1.02
NPC1-208ENST00000590301 MEIS1O00470 390 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 SCG2P13521 617 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 RPS6KB1P23443 525 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 GNA11P29992 359 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 CLK2P49760 499 aaKnown RBP8.67□□□□□ -1.02
NPC1-208ENST00000590301 DEFB103AP81534 67 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 AKAP17AQ02040 695 aaKnown RBP8.67□□□□□ -1.02
NPC1-208ENST00000590301 SP4Q02446 784 aa8.67□□□□□ -1.02
NPC1-208ENST00000590301 PFKFB3Q16875 520 aaPredicted RBP8.67□□□□□ -1.02
NPC1-208ENST00000590301 TYW1BQ6NUM6 668 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms