RNA–Protein interactions for RNA: ENST00000589872.1

NBR1-205, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NBR1, Length 3,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-205ENST00000589872 TECP42680 631 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 SEMA3FQ13275 785 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 CUL1Q13616 776 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 FMNL3Q8IVF7 1028 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 GJD4Q96KN9 370 aaPredicted RBP13.55□□□□□ -0.24
NBR1-205ENST00000589872 PNMA2Q9UL42 364 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 LY75O60449 1722 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 MYMKA6NI61 221 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 BHMG1C9JSJ3 638 aaPredicted RBP13.55□□□□□ -0.24
NBR1-205ENST00000589872 BUB1BO60566 1050 aaPredicted RBP13.55□□□□□ -0.24
NBR1-205ENST00000589872 CLTAP09496 248 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 FGRP09769 529 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 CYP2D6P10635 497 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 RPS6KA1Q15418 735 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 TAF4BQ92750 862 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 XPO6Q96QU8 1125 aaKnown RBP13.55□□□□□ -0.24
NBR1-205ENST00000589872 TCP11L1Q9NUJ3 509 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 AMACRQ9UHK6 382 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 MTMR7Q9Y216 660 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.55□□□□□ -0.24
NBR1-205ENST00000589872 CCDC88AQ3V6T2 1871 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 SLC18A3Q16572 532 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 MEX3CQ5U5Q3 659 aaKnown RBP13.55□□□□□ -0.24
NBR1-205ENST00000589872 RCSD1Q6JBY9 416 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 TBC1D1Q86TI0 1168 aaPredicted RBP13.55□□□□□ -0.24
NBR1-205ENST00000589872 PNMA8AQ86V59 439 aaPredicted RBP13.55□□□□□ -0.24
NBR1-205ENST00000589872 ZNF384Q8TF68 577 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 ANKS1AQ92625 1134 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 CHMP6Q96FZ7 201 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 LSM14BQ9BX40 385 aaKnown RBP13.55□□□□□ -0.24
NBR1-205ENST00000589872 CELF4Q9BZC1 486 aaKnown RBP13.55□□□□□ -0.24
NBR1-205ENST00000589872 MTFR1LQ9H019 292 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 CUEDC2Q9H467 287 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 ATP6V0A2Q9Y487 856 aa13.55□□□□□ -0.24
NBR1-205ENST00000589872 CTNND1O60716 968 aaKnown RBP13.54□□□□□ -0.24
NBR1-205ENST00000589872 KIF4AO95239 1232 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 RAPGEF1Q13905 1077 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 ERMARDQ5T6L9 678 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 TMC3Q7Z5M5 1100 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 PSMD1Q99460 953 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 DPH5Q9H2P9 285 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 F8VZ95 297 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 CAND2O75155 1236 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 DHX9Q08211 1270 aaKnown RBP13.54□□□□□ -0.24
NBR1-205ENST00000589872 LETM2Q2VYF4 491 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 MAB21L3Q8N8X9 362 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 FAM133AQ8N9E0 248 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 CCDC63Q8NA47 563 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 CCDC197Q8NCU1 140 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.54□□□□□ -0.24
NBR1-205ENST00000589872 RSRC1Q96IZ7 334 aaKnown RBP13.54□□□□□ -0.24
NBR1-205ENST00000589872 EBF2Q9HAK2 575 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 MAGEF1Q9HAY2 307 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 CEP72Q9P209 647 aa13.54□□□□□ -0.24
NBR1-205ENST00000589872 OR52Z1P0C646 297 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 PPP1R2P41236 205 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 NBPF9Q3BBW0 867 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 COBLL1Q53SF7 1204 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 FAM133BQ5BKY9 247 aaKnown RBP13.53□□□□□ -0.24
NBR1-205ENST00000589872 SPATA31A1Q5TZJ5 1347 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 TMED8Q6PL24 325 aaPredicted RBP13.53□□□□□ -0.24
NBR1-205ENST00000589872 HEATR3Q7Z4Q2 680 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 ZNF317Q96PQ6 595 aaPredicted RBP13.53□□□□□ -0.24
NBR1-205ENST00000589872 FAM129AQ9BZQ8 928 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 BLOC1S4Q9NUP1 217 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 PANK4Q9NVE7 773 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 USP21Q9UK80 565 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 NOC2LQ9Y3T9 749 aaKnown RBP13.53□□□□□ -0.24
NBR1-205ENST00000589872 CACNA1SQ13698 1873 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 EME2A4GXA9 379 aaPredicted RBP13.53□□□□□ -0.24
NBR1-205ENST00000589872 TTI1O43156 1089 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 CCNT1O60563 726 aaKnown RBP13.53□□□□□ -0.24
NBR1-205ENST00000589872 ANP32DO95626 131 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 ARMC9Q7Z3E5 817 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 METTL13Q8N6R0 699 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 EIF1ADQ8N9N8 165 aaKnown RBP13.53□□□□□ -0.24
NBR1-205ENST00000589872 HOOK2Q96ED9 719 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 BRIP1Q9BX63 1249 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 TRIM31Q9BZY9 425 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 AGAP1Q9UPQ3 857 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 SHBGP04278 402 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 ZBTB48P10074 688 aaPredicted RBP13.53□□□□□ -0.24
NBR1-205ENST00000589872 CHN1P15882 459 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 PDE6BP35913 854 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 PRPHP41219 470 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 GYG1P46976 350 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 SLC8A3P57103 927 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 GRIK3Q13003 919 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 AGAP11Q8TF27 550 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 P3H4Q92791 437 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 TLCD1Q96CP7 247 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 EDEM3Q9BZQ6 932 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 SLC12A4Q9UP95 1085 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 NUP98P52948 1817 aa13.53□□□□□ -0.24
NBR1-205ENST00000589872 USP11P51784 963 aa13.52□□□□□ -0.24
NBR1-205ENST00000589872 AMPD3Q01432 767 aa13.52□□□□□ -0.24
NBR1-205ENST00000589872 KLHL30Q0D2K2 578 aa13.52□□□□□ -0.24
NBR1-205ENST00000589872 GRB10Q13322 594 aa13.52□□□□□ -0.24
NBR1-205ENST00000589872 LRRC34Q8IZ02 419 aa13.52□□□□□ -0.24
NBR1-205ENST00000589872 GGT7Q9UJ14 662 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms