RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 ZHX3Q9H4I2 956 aa16.89■□□□□ 0.3
MBD1-217ENST00000588937 TBC1D7Q9P0N9 293 aa16.89■□□□□ 0.3
MBD1-217ENST00000588937 SIK3Q9Y2K2 1263 aa16.89■□□□□ 0.3
MBD1-217ENST00000588937 NPHP3-ACAD11A0A0J9YXS1 232 aa16.89■□□□□ 0.29
MBD1-217ENST00000588937 TADA3O75528 432 aa16.89■□□□□ 0.29
MBD1-217ENST00000588937 ICAM1P05362 532 aa16.89■□□□□ 0.29
MBD1-217ENST00000588937 HNRNPH3P31942 346 aaKnown RBP16.89■□□□□ 0.29
MBD1-217ENST00000588937 KLK7P49862 253 aa16.89■□□□□ 0.29
MBD1-217ENST00000588937 CEP55Q53EZ4 464 aa16.89■□□□□ 0.29
MBD1-217ENST00000588937 ZC3H3Q8IXZ2 948 aaKnown RBP16.89■□□□□ 0.29
MBD1-217ENST00000588937 PRPF38AQ8NAV1 312 aaKnown RBP16.89■□□□□ 0.29
MBD1-217ENST00000588937 EHBP1Q8NDI1 1231 aa16.89■□□□□ 0.29
MBD1-217ENST00000588937 IRX2Q9BZI1 471 aaPredicted RBP16.89■□□□□ 0.29
MBD1-217ENST00000588937 TANGO6Q9C0B7 1094 aa16.89■□□□□ 0.29
MBD1-217ENST00000588937 KCTD10Q9H3F6 313 aa16.89■□□□□ 0.29
MBD1-217ENST00000588937 PNMA2Q9UL42 364 aa16.89■□□□□ 0.29
MBD1-217ENST00000588937 FAM184BQ9ULE4 1060 aa16.89■□□□□ 0.29
MBD1-217ENST00000588937 PHF20L1A8MW92 1017 aa16.88■□□□□ 0.29
MBD1-217ENST00000588937 EIF3CLB5ME19 914 aaKnown RBP16.88■□□□□ 0.29
MBD1-217ENST00000588937 MEIS1O00470 390 aa16.88■□□□□ 0.29
MBD1-217ENST00000588937 CETN3O15182 167 aa16.88■□□□□ 0.29
MBD1-217ENST00000588937 PSMD10O75832 226 aa16.88■□□□□ 0.29
MBD1-217ENST00000588937 LMNB1P20700 586 aa16.88■□□□□ 0.29
MBD1-217ENST00000588937 ARHGAP25P42331 645 aa16.88■□□□□ 0.29
MBD1-217ENST00000588937 PSMC6P62333 389 aa16.88■□□□□ 0.29
MBD1-217ENST00000588937 TUBB4BP68371 445 aa16.88■□□□□ 0.29
MBD1-217ENST00000588937 MCF2L2Q86YR7 1114 aa16.88■□□□□ 0.29
MBD1-217ENST00000588937 NEK11Q8NG66 645 aa16.88■□□□□ 0.29
MBD1-217ENST00000588937 TBC1D5Q92609 795 aa16.88■□□□□ 0.29
MBD1-217ENST00000588937 EIF3CQ99613 913 aaKnown RBP16.88■□□□□ 0.29
MBD1-217ENST00000588937 NAPGQ99747 312 aaPredicted RBP16.88■□□□□ 0.29
MBD1-217ENST00000588937 WDR18Q9BV38 432 aa16.88■□□□□ 0.29
MBD1-217ENST00000588937 MMRN2Q9H8L6 949 aa16.88■□□□□ 0.29
MBD1-217ENST00000588937 NHEJ1Q9H9Q4 299 aaPredicted RBP16.88■□□□□ 0.29
MBD1-217ENST00000588937 CCPG1Q9ULG6 757 aa16.88■□□□□ 0.29
MBD1-217ENST00000588937 CALUO43852 315 aaPredicted RBP16.87■□□□□ 0.29
MBD1-217ENST00000588937 GAS7O60861 476 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 TBCAO75347 108 aaKnown RBP16.87■□□□□ 0.29
MBD1-217ENST00000588937 GAP43P17677 238 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
MBD1-217ENST00000588937 NELFCDQ8IXH7 590 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 SAMD3Q8N6K7 520 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 CEP112Q8N8E3 955 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 HSD17B14Q9BPX1 270 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 REEP2Q9BRK0 252 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 GLIS2Q9BZE0 524 aaPredicted RBP16.87■□□□□ 0.29
MBD1-217ENST00000588937 KIAA1683Q9H0B3 1180 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 NUCKS1Q9H1E3 243 aaKnown RBP16.87■□□□□ 0.29
MBD1-217ENST00000588937 ARGLU1Q9NWB6 273 aaPredicted RBP16.87■□□□□ 0.29
MBD1-217ENST00000588937 PLAGL2Q9UPG8 496 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 SMCHD1A6NHR9 2005 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 EML1O00423 815 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 KRT86O43790 486 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 CTNND1O60716 968 aaKnown RBP16.87■□□□□ 0.29
MBD1-217ENST00000588937 HSD17B4P51659 736 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 CYP4A11Q02928 519 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 RAD51AP2Q09MP3 1159 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 ADAM9Q13443 819 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 SAMD1Q6SPF0 538 aaPredicted RBP16.87■□□□□ 0.29
MBD1-217ENST00000588937 KIAA1328Q86T90 577 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 SLC35F6Q8N357 371 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 BHMT2Q9H2M3 363 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 FBXO28Q9NVF7 368 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 MAP3K20Q9NYL2 800 aaKnown RBP16.87■□□□□ 0.29
MBD1-217ENST00000588937 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.87■□□□□ 0.29
MBD1-217ENST00000588937 CDC23Q9UJX2 597 aa16.87■□□□□ 0.29
MBD1-217ENST00000588937 REXO2Q9Y3B8 237 aaKnown RBP16.87■□□□□ 0.29
MBD1-217ENST00000588937 A0A0U1RQJ8 604 aa16.86■□□□□ 0.29
MBD1-217ENST00000588937 SPA17Q15506 151 aa16.86■□□□□ 0.29
MBD1-217ENST00000588937 KNOP1Q1ED39 458 aaKnown RBP16.86■□□□□ 0.29
MBD1-217ENST00000588937 GLIPR1L2Q4G1C9 344 aa16.86■□□□□ 0.29
MBD1-217ENST00000588937 EPM2AIP1Q7L775 607 aaPredicted RBP16.86■□□□□ 0.29
MBD1-217ENST00000588937 LRRN4CLQ8ND94 238 aa16.86■□□□□ 0.29
MBD1-217ENST00000588937 ATRIPQ8WXE1 791 aa16.86■□□□□ 0.29
MBD1-217ENST00000588937 CCDC42Q96M95 316 aa16.86■□□□□ 0.29
MBD1-217ENST00000588937 TEPSINQ96N21 525 aa16.86■□□□□ 0.29
MBD1-217ENST00000588937 ZNF577Q9BSK1 485 aa16.86■□□□□ 0.29
MBD1-217ENST00000588937 TEKT3Q9BXF9 490 aa16.86■□□□□ 0.29
MBD1-217ENST00000588937 FGFBP2Q9BYJ0 223 aa16.86■□□□□ 0.29
MBD1-217ENST00000588937 TSGA10Q9BZW7 698 aa16.86■□□□□ 0.29
MBD1-217ENST00000588937 FAM207AQ9NSI2 230 aaPredicted RBP16.86■□□□□ 0.29
MBD1-217ENST00000588937 TRAF3IP3Q9Y228 551 aa16.86■□□□□ 0.29
MBD1-217ENST00000588937 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.86■□□□□ 0.292e-6■■□□□ 12
MBD1-217ENST00000588937 PDXKO00764 312 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 SLITRK3O94933 977 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 INPP5BP32019 993 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 EPHA7Q15375 998 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 BMT2Q1RMZ1 405 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 CCDC122Q5T0U0 273 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 FBXO38Q6PIJ6 1188 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 NIPA1Q7RTP0 329 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 CACNA2D4Q7Z3S7 1137 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 SFR1Q86XK3 245 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 LOXHD1Q8IVV2 1947 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 TRIM59Q8IWR1 403 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 NEK9Q8TD19 979 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 GOLGA1Q92805 767 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 NACC1Q96RE7 527 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 MXRA8Q9BRK3 442 aa16.85■□□□□ 0.29
MBD1-217ENST00000588937 RGL1Q9NZL6 768 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms