RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 RAVER2Q9HCJ3 691 aaKnown RBP12.56□□□□□ -0.4
BCAS3-220ENST00000588720 AFDNP55196 1824 aaKnown RBP12.56□□□□□ -0.4
BCAS3-220ENST00000588720 SLMAPQ14BN4 828 aa12.56□□□□□ -0.4
BCAS3-220ENST00000588720 BRD3Q15059 726 aa12.56□□□□□ -0.4
BCAS3-220ENST00000588720 CCDC6Q16204 474 aa12.56□□□□□ -0.4
BCAS3-220ENST00000588720 DEFB132Q7Z7B7 95 aa12.56□□□□□ -0.4
BCAS3-220ENST00000588720 LDHDQ86WU2 507 aa12.56□□□□□ -0.4
BCAS3-220ENST00000588720 LPAR1Q92633 364 aa12.56□□□□□ -0.4
BCAS3-220ENST00000588720 NAP1L3Q99457 506 aaPredicted RBP12.56□□□□□ -0.4
BCAS3-220ENST00000588720 TMEM60Q9H2L4 133 aa12.56□□□□□ -0.4
BCAS3-220ENST00000588720 VCPKMTQ9H867 229 aa12.56□□□□□ -0.4
BCAS3-220ENST00000588720 HOXC10Q9NYD6 342 aa12.56□□□□□ -0.4
BCAS3-220ENST00000588720 BZW2Q9Y6E2 419 aaKnown RBP12.56□□□□□ -0.4
BCAS3-220ENST00000588720 ROBO1Q9Y6N7 1651 aa12.56□□□□□ -0.4
BCAS3-220ENST00000588720 PHRF1Q9P1Y6 1649 aaKnown RBP12.56□□□□□ -0.4
BCAS3-220ENST00000588720 PHLPP1O60346 1717 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 TNNI1P19237 187 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 TERF2Q15554 542 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 MICALL2Q8IY33 904 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 SYCE1Q8N0S2 351 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 PRMT6Q96LA8 375 aaPredicted RBP12.55□□□□□ -0.4
BCAS3-220ENST00000588720 SPTLC3Q9NUV7 552 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 PRR12Q9ULL5 1215 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 MTMR1Q13613 665 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 CCDC170Q8IYT3 715 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 NEK9Q8TD19 979 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 CEP170P1Q96L14 293 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 ACCSQ96QU6 501 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 TBC1D22BQ9NU19 505 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 CNOT7Q9UIV1 285 aaKnown RBP12.55□□□□□ -0.4
BCAS3-220ENST00000588720 ECM2O94769 699 aaPredicted RBP12.55□□□□□ -0.4
BCAS3-220ENST00000588720 COASYQ13057 564 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 FAM160B1Q5W0V3 765 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 MAATS1Q7Z4T9 603 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.55□□□□□ -0.4
BCAS3-220ENST00000588720 DDX41Q9UJV9 622 aaKnown RBP12.55□□□□□ -0.4
BCAS3-220ENST00000588720 SOWAHDA6NJG2 315 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 ILDR1Q86SU0 546 aaPredicted RBP12.55□□□□□ -0.4
BCAS3-220ENST00000588720 PIGOQ8TEQ8 1089 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 SLC7A3Q8WY07 619 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 PHLPP2Q6ZVD8 1323 aa12.55□□□□□ -0.4
BCAS3-220ENST00000588720 EFCAB8A8MWE9 144 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 TBX3O15119 743 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 CLIC2O15247 247 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 RPS12P25398 132 aaKnown RBP12.54□□□□□ -0.4
BCAS3-220ENST00000588720 CCNA1P78396 465 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 ALCAMQ13740 583 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 PPP2R5AQ15172 486 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 RPS6KA1Q15418 735 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 MIS18BP1Q6P0N0 1132 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 ARMC9Q7Z3E5 817 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 ZBTB8OSQ8IWT0 167 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 CTTNBP2NLQ9P2B4 639 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 SEPT9Q9UHD8 586 aaPredicted RBP12.54□□□□□ -0.4
BCAS3-220ENST00000588720 MTUS1Q9ULD2 1270 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 GAKO14976 1311 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 POTEFA5A3E0 1075 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 WDR46O15213 610 aaKnown RBP12.54□□□□□ -0.4
BCAS3-220ENST00000588720 SPOPO43791 374 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 SORBS3O60504 671 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 POTEIP0CG38 1075 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 OSBPP22059 807 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 GRM1Q13255 1194 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 CEP55Q53EZ4 464 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 ICE2Q659A1 982 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 POTEGQ6S5H5 508 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 POTEEQ6S8J3 1075 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 TEX2Q8IWB9 1127 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 CCDC155Q8N6L0 562 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 CEP63Q96MT8 703 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 SLC5A4Q9NY91 659 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 FEZ2Q9UHY8 353 aaPredicted RBP12.54□□□□□ -0.4
BCAS3-220ENST00000588720 VIRMAQ69YN4 1812 aaKnown RBP12.54□□□□□ -0.4
BCAS3-220ENST00000588720 PRPF6O94906 941 aaKnown RBP12.54□□□□□ -0.4
BCAS3-220ENST00000588720 JAK3P52333 1124 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 ZBTB17Q13105 803 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 TSNAXIP1Q2TAA8 658 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 CFAP221Q4G0U5 840 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 C8orf74Q6P047 294 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 CCDC127Q96BQ5 260 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 RNF146Q9NTX7 359 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 STIM2Q9P246 746 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 SLIT2O94813 1529 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 IPO5O00410 1097 aaKnown RBP12.54□□□□□ -0.4
BCAS3-220ENST00000588720 HNRNPDLO14979 420 aaKnown RBP12.54□□□□□ -0.4
BCAS3-220ENST00000588720 RHOBTB3O94955 611 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 FMR1Q06787 632 aaKnown RBP eCLIP12.54□□□□□ -0.4
BCAS3-220ENST00000588720 U2AF1L4Q8WU68 220 aaKnown RBP12.54□□□□□ -0.4
BCAS3-220ENST00000588720 POMGNT1Q8WZA1 660 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 C7orf25Q9BPX7 421 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 TMEM39BQ9GZU3 492 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 RIOX1Q9H6W3 641 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 MYOZ2Q9NPC6 264 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 ALS2Q96Q42 1657 aa12.54□□□□□ -0.4
BCAS3-220ENST00000588720 LRRIQ4A6NIV6 560 aa12.53□□□□□ -0.4
BCAS3-220ENST00000588720 PSAPP07602 524 aa12.53□□□□□ -0.4
BCAS3-220ENST00000588720 MAP3K9P80192 1104 aa12.53□□□□□ -0.4
BCAS3-220ENST00000588720 SEL1L2Q5TEA6 688 aa12.53□□□□□ -0.4
BCAS3-220ENST00000588720 SNRNP48Q6IEG0 339 aaKnown RBP12.53□□□□□ -0.4
BCAS3-220ENST00000588720 PEX26Q7Z412 305 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms