RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 DDX25Q9UHL0 483 aaKnown RBP22.91■■□□□ 1.26
DDX39A-207ENST00000588542 KIF3AQ9Y496 699 aa22.91■■□□□ 1.26
DDX39A-207ENST00000588542 TRIM43BA6NCK2 446 aa22.9■■□□□ 1.26
DDX39A-207ENST00000588542 H3BRB1 525 aa22.9■■□□□ 1.26
DDX39A-207ENST00000588542 DDX39AO00148 427 aaKnown RBP22.9■■□□□ 1.26
DDX39A-207ENST00000588542 B4GALT4O60513 344 aa22.9■■□□□ 1.26
DDX39A-207ENST00000588542 ATG7O95352 703 aa22.9■■□□□ 1.26
DDX39A-207ENST00000588542 CHMP4BP1P59074 171 aa22.9■■□□□ 1.26
DDX39A-207ENST00000588542 UTP14CQ5TAP6 766 aaKnown RBP22.9■■□□□ 1.26
DDX39A-207ENST00000588542 PRPF38BQ5VTL8 546 aaKnown RBP22.9■■□□□ 1.26
DDX39A-207ENST00000588542 ETNPPLQ8TBG4 499 aa22.9■■□□□ 1.26
DDX39A-207ENST00000588542 SLC5A5Q92911 643 aa22.9■■□□□ 1.26
DDX39A-207ENST00000588542 GJA10Q969M2 543 aa22.9■■□□□ 1.26
DDX39A-207ENST00000588542 TRIM43Q96BQ3 446 aaPredicted RBP22.9■■□□□ 1.26
DDX39A-207ENST00000588542 PCYT2Q99447 389 aa22.9■■□□□ 1.26
DDX39A-207ENST00000588542 TRPV6Q9H1D0 765 aa22.9■■□□□ 1.26
DDX39A-207ENST00000588542 TUT1Q9H6E5 874 aaKnown RBP22.9■■□□□ 1.26
DDX39A-207ENST00000588542 KIF28PB7ZC32 967 aa22.89■■□□□ 1.25
DDX39A-207ENST00000588542 WNT7AO00755 349 aa22.89■■□□□ 1.25
DDX39A-207ENST00000588542 CCNT1O60563 726 aaKnown RBP22.89■■□□□ 1.25
DDX39A-207ENST00000588542 LGR5O75473 907 aa22.89■■□□□ 1.25
DDX39A-207ENST00000588542 GCFC2P16383 781 aaKnown RBP22.89■■□□□ 1.25
DDX39A-207ENST00000588542 PTPN11Q06124 597 aaPredicted RBP22.89■■□□□ 1.25
DDX39A-207ENST00000588542 FAM47CQ5HY64 1035 aa22.89■■□□□ 1.25
DDX39A-207ENST00000588542 SESTD1Q86VW0 696 aa22.89■■□□□ 1.25
DDX39A-207ENST00000588542 TBX21Q9UL17 535 aa22.89■■□□□ 1.25
DDX39A-207ENST00000588542 KIAA0355O15063 1070 aa22.88■■□□□ 1.25
DDX39A-207ENST00000588542 TLR3O15455 904 aaKnown RBP22.88■■□□□ 1.25
DDX39A-207ENST00000588542 U2AF2P26368 475 aaKnown RBP eCLIP22.88■■□□□ 1.254e-9■□□□□ 9.1
DDX39A-207ENST00000588542 ABHD15Q6UXT9 468 aa22.88■■□□□ 1.25
DDX39A-207ENST00000588542 KCNMB3Q9NPA1 279 aa22.88■■□□□ 1.25
DDX39A-207ENST00000588542 PRDM5Q9NQX1 630 aaPredicted RBP22.88■■□□□ 1.25
DDX39A-207ENST00000588542 TRMT13Q9NUP7 481 aaKnown RBP22.88■■□□□ 1.25
DDX39A-207ENST00000588542 TMEM39AQ9NV64 488 aa22.88■■□□□ 1.25
DDX39A-207ENST00000588542 HDAC6Q9UBN7 1215 aa22.88■■□□□ 1.25
DDX39A-207ENST00000588542 EMSYQ7Z589 1322 aa22.87■■□□□ 1.25
DDX39A-207ENST00000588542 IGKV6D-21A0A0A0MT36 114 aa22.87■■□□□ 1.25
DDX39A-207ENST00000588542 PSMD10O75832 226 aa22.87■■□□□ 1.25
DDX39A-207ENST00000588542 ITGB8P26012 769 aa22.87■■□□□ 1.25
DDX39A-207ENST00000588542 HIC1Q14526 733 aa22.87■■□□□ 1.25
DDX39A-207ENST00000588542 GDF6Q6KF10 455 aaPredicted RBP22.87■■□□□ 1.25
DDX39A-207ENST00000588542 ZNF746Q6NUN9 644 aaPredicted RBP22.87■■□□□ 1.25
DDX39A-207ENST00000588542 NOSTRINQ8IVI9 506 aa22.87■■□□□ 1.25
DDX39A-207ENST00000588542 INTS4Q96HW7 963 aaKnown RBP22.87■■□□□ 1.25
DDX39A-207ENST00000588542 CTAGE1Q96RT6 745 aa22.87■■□□□ 1.25
DDX39A-207ENST00000588542 RIT2Q99578 217 aa22.87■■□□□ 1.25
DDX39A-207ENST00000588542 NAP1L4Q99733 375 aaKnown RBP22.87■■□□□ 1.25
DDX39A-207ENST00000588542 GTF2IRD1Q9UHL9 959 aa22.87■■□□□ 1.25
DDX39A-207ENST00000588542 LRCH2Q5VUJ6 765 aa22.86■■□□□ 1.25
DDX39A-207ENST00000588542 POTEDQ86YR6 584 aa22.86■■□□□ 1.25
DDX39A-207ENST00000588542 C7orf31Q8N865 590 aa22.86■■□□□ 1.25
DDX39A-207ENST00000588542 RNPEPQ9H4A4 650 aa22.86■■□□□ 1.25
DDX39A-207ENST00000588542 RANBP2P49792 3224 aaKnown RBP22.86■■□□□ 1.25
DDX39A-207ENST00000588542 GAS7O60861 476 aa22.85■■□□□ 1.25
DDX39A-207ENST00000588542 SUPT20HL2P0C7V6 817 aa22.85■■□□□ 1.25
DDX39A-207ENST00000588542 HOXC8P31273 242 aa22.85■■□□□ 1.25
DDX39A-207ENST00000588542 KRT76Q01546 638 aa22.85■■□□□ 1.25
DDX39A-207ENST00000588542 B3GNT9Q6UX72 402 aa22.85■■□□□ 1.25
DDX39A-207ENST00000588542 HAS1Q92839 578 aa22.85■■□□□ 1.25
DDX39A-207ENST00000588542 TEKT3Q9BXF9 490 aa22.85■■□□□ 1.25
DDX39A-207ENST00000588542 UNC45AQ9H3U1 944 aa22.85■■□□□ 1.25
DDX39A-207ENST00000588542 SMARCAD1Q9H4L7 1026 aa22.85■■□□□ 1.25
DDX39A-207ENST00000588542 PRKAG2Q9UGJ0 569 aa22.85■■□□□ 1.25
DDX39A-207ENST00000588542 ZNF215Q9UL58 517 aaPredicted RBP22.85■■□□□ 1.25
DDX39A-207ENST00000588542 SMIM10L2AP0DMW4 78 aa22.84■■□□□ 1.25
DDX39A-207ENST00000588542 SMIM10L2BP0DMW5 78 aa22.84■■□□□ 1.25
DDX39A-207ENST00000588542 LARP1BQ659C4 914 aaKnown RBP22.84■■□□□ 1.25
DDX39A-207ENST00000588542 CCDC60Q8IWA6 550 aaPredicted RBP22.84■■□□□ 1.25
DDX39A-207ENST00000588542 SMAP1Q8IYB5 467 aaPredicted RBP22.84■■□□□ 1.25
DDX39A-207ENST00000588542 GLG1Q92896 1179 aa22.84■■□□□ 1.25
DDX39A-207ENST00000588542 FAM20AQ96MK3 541 aa22.84■■□□□ 1.25
DDX39A-207ENST00000588542 ERAP1Q9NZ08 941 aa22.84■■□□□ 1.25
DDX39A-207ENST00000588542 TBX3O15119 743 aa22.83■■□□□ 1.25
DDX39A-207ENST00000588542 CYP2C9P11712 490 aa22.83■■□□□ 1.25
DDX39A-207ENST00000588542 MARK3P27448 753 aa22.83■■□□□ 1.25
DDX39A-207ENST00000588542 MAGEA10P43363 369 aaPredicted RBP22.83■■□□□ 1.25
DDX39A-207ENST00000588542 ZNF200P98182 395 aaPredicted RBP22.83■■□□□ 1.25
DDX39A-207ENST00000588542 GNL2Q13823 731 aaKnown RBP22.83■■□□□ 1.25
DDX39A-207ENST00000588542 PTGISQ16647 500 aa22.83■■□□□ 1.25
DDX39A-207ENST00000588542 MIS18BP1Q6P0N0 1132 aa22.83■■□□□ 1.25
DDX39A-207ENST00000588542 PLPPR4Q7Z2D5 763 aa22.83■■□□□ 1.25
DDX39A-207ENST00000588542 HSCBQ8IWL3 235 aa22.83■■□□□ 1.25
DDX39A-207ENST00000588542 GDF15Q99988 308 aa22.83■■□□□ 1.25
DDX39A-207ENST00000588542 TANC1Q9C0D5 1861 aa22.83■■□□□ 1.24
DDX39A-207ENST00000588542 H3BQV1 296 aa22.82■■□□□ 1.24
DDX39A-207ENST00000588542 TIMP1P01033 207 aa22.82■■□□□ 1.24
DDX39A-207ENST00000588542 RAG1P15918 1043 aa22.82■■□□□ 1.24
DDX39A-207ENST00000588542 STAT5BP51692 787 aa22.82■■□□□ 1.24
DDX39A-207ENST00000588542 MDM2Q00987 491 aaPredicted RBP22.82■■□□□ 1.24
DDX39A-207ENST00000588542 AFAP1L1Q8TED9 768 aa22.82■■□□□ 1.24
DDX39A-207ENST00000588542 NOC4LQ9BVI4 516 aaKnown RBP22.82■■□□□ 1.24
DDX39A-207ENST00000588542 PRO3102Q9H379 93 aa22.82■■□□□ 1.24
DDX39A-207ENST00000588542 AZI2Q9H6S1 392 aa22.82■■□□□ 1.24
DDX39A-207ENST00000588542 FOXD4L1Q9NU39 408 aa22.82■■□□□ 1.24
DDX39A-207ENST00000588542 VAV3Q9UKW4 847 aa22.82■■□□□ 1.24
DDX39A-207ENST00000588542 PCDHA10Q9Y5I2 948 aa22.82■■□□□ 1.24
DDX39A-207ENST00000588542 SCN5AQ14524 2016 aa22.82■■□□□ 1.24
DDX39A-207ENST00000588542 UMODL1Q5DID0 1318 aa22.82■■□□□ 1.24
DDX39A-207ENST00000588542 WDR64B1ANS9 1081 aa22.81■■□□□ 1.24
DDX39A-207ENST00000588542 CHMP2AO43633 222 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 589.9 ms