RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 SERINC5Q86VE9 423 aa22.3■■□□□ 1.16
TPM4-208ENST00000588410 CYP2W1Q8TAV3 490 aa22.3■■□□□ 1.16
TPM4-208ENST00000588410 GLG1Q92896 1179 aa22.3■■□□□ 1.16
TPM4-208ENST00000588410 RNPEPQ9H4A4 650 aa22.3■■□□□ 1.16
TPM4-208ENST00000588410 ZNF576Q9H609 170 aa22.3■■□□□ 1.16
TPM4-208ENST00000588410 SETD4Q9NVD3 440 aa22.3■■□□□ 1.16
TPM4-208ENST00000588410 SLC9A2Q9UBY0 812 aa22.3■■□□□ 1.16
TPM4-208ENST00000588410 THPOP40225 353 aa22.29■■□□□ 1.16
TPM4-208ENST00000588410 TRIM71Q2Q1W2 868 aaKnown RBP22.29■■□□□ 1.16
TPM4-208ENST00000588410 ZNF618Q5T7W0 954 aa22.29■■□□□ 1.16
TPM4-208ENST00000588410 SMARCAD1Q9H4L7 1026 aa22.29■■□□□ 1.16
TPM4-208ENST00000588410 GSTTP1A0A1W2PQM5 241 aa22.28■■□□□ 1.16
TPM4-208ENST00000588410 MEIS1O00470 390 aa22.28■■□□□ 1.16
TPM4-208ENST00000588410 TREHO43280 583 aa22.28■■□□□ 1.16
TPM4-208ENST00000588410 ARP10275 920 aa22.28■■□□□ 1.16
TPM4-208ENST00000588410 ANAPC15P60006 121 aa22.28■■□□□ 1.16
TPM4-208ENST00000588410 NIPA1Q7RTP0 329 aa22.28■■□□□ 1.16
TPM4-208ENST00000588410 WNT8BQ93098 351 aa22.28■■□□□ 1.16
TPM4-208ENST00000588410 AZI2Q9H6S1 392 aa22.28■■□□□ 1.16
TPM4-208ENST00000588410 AGO4Q9HCK5 861 aaKnown RBP22.28■■□□□ 1.16
TPM4-208ENST00000588410 ERAP1Q9NZ08 941 aa22.28■■□□□ 1.16
TPM4-208ENST00000588410 VPS54Q9P1Q0 977 aa22.28■■□□□ 1.16
TPM4-208ENST00000588410 NFASCO94856 1347 aa22.28■■□□□ 1.16
TPM4-208ENST00000588410 BAIAP3O94812 1187 aa22.27■■□□□ 1.16
TPM4-208ENST00000588410 MARK3P27448 753 aa22.27■■□□□ 1.16
TPM4-208ENST00000588410 HOXC8P31273 242 aa22.27■■□□□ 1.16
TPM4-208ENST00000588410 KCNJ6P48051 423 aa22.27■■□□□ 1.16
TPM4-208ENST00000588410 NLRP5P59047 1200 aa22.27■■□□□ 1.16
TPM4-208ENST00000588410 PLA2G4DQ86XP0 818 aa22.27■■□□□ 1.16
TPM4-208ENST00000588410 MYLIPQ8WY64 445 aa22.27■■□□□ 1.16
TPM4-208ENST00000588410 SLC9A7Q96T83 725 aa22.27■■□□□ 1.16
TPM4-208ENST00000588410 NKX2-4Q9H2Z4 354 aa22.27■■□□□ 1.16
TPM4-208ENST00000588410 SLC28A3Q9HAS3 691 aa22.27■■□□□ 1.16
TPM4-208ENST00000588410 SH3GLB2Q9NR46 395 aa22.27■■□□□ 1.16
TPM4-208ENST00000588410 NRCAMQ92823 1304 aa22.27■■□□□ 1.16
TPM4-208ENST00000588410 RSPH10B2B2RC85 870 aa22.26■■□□□ 1.15
TPM4-208ENST00000588410 NBNO60934 754 aa22.26■■□□□ 1.15
TPM4-208ENST00000588410 DEXIO95424 95 aa22.26■■□□□ 1.15
TPM4-208ENST00000588410 CYP3A4P08684 503 aa22.26■■□□□ 1.15
TPM4-208ENST00000588410 RSPH10BP0C881 870 aa22.26■■□□□ 1.15
TPM4-208ENST00000588410 RABGGTBP53611 331 aa22.26■■□□□ 1.15
TPM4-208ENST00000588410 PPFIA1Q13136 1202 aa22.26■■□□□ 1.15
TPM4-208ENST00000588410 GRIN2CQ14957 1233 aa22.26■■□□□ 1.15
TPM4-208ENST00000588410 CNKSR3Q6P9H4 555 aa22.26■■□□□ 1.15
TPM4-208ENST00000588410 PHOSPHO2Q8TCD6 241 aa22.26■■□□□ 1.15
TPM4-208ENST00000588410 LMBR1Q8WVP7 490 aa22.26■■□□□ 1.15
TPM4-208ENST00000588410 PCDHA11Q9Y5I1 949 aa22.26■■□□□ 1.15
TPM4-208ENST00000588410 EMSYQ7Z589 1322 aa22.26■■□□□ 1.15
TPM4-208ENST00000588410 CAND2O75155 1236 aa22.25■■□□□ 1.15
TPM4-208ENST00000588410 CDKL5O76039 1030 aa22.25■■□□□ 1.15
TPM4-208ENST00000588410 CXCL10P02778 98 aa22.25■■□□□ 1.15
TPM4-208ENST00000588410 FOSL2P15408 326 aa22.25■■□□□ 1.15
TPM4-208ENST00000588410 ACTR2P61160 394 aa22.25■■□□□ 1.15
TPM4-208ENST00000588410 ITGB3BPQ13352 177 aaPredicted RBP22.25■■□□□ 1.15
TPM4-208ENST00000588410 ANKRD1Q15327 319 aa22.25■■□□□ 1.15
TPM4-208ENST00000588410 SLC17A8Q8NDX2 589 aa22.25■■□□□ 1.15
TPM4-208ENST00000588410 RASGRP4Q8TDF6 673 aa22.25■■□□□ 1.15
TPM4-208ENST00000588410 TNPO1Q92973 898 aaKnown RBP22.25■■□□□ 1.15
TPM4-208ENST00000588410 SLKQ9H2G2 1235 aaPredicted RBP22.25■■□□□ 1.15
TPM4-208ENST00000588410 KIF28PB7ZC32 967 aa22.24■■□□□ 1.15
TPM4-208ENST00000588410 FAM86B1E9PN63 330 aa22.24■■□□□ 1.15
TPM4-208ENST00000588410 DDX39AO00148 427 aaKnown RBP22.24■■□□□ 1.15
TPM4-208ENST00000588410 ADAMTS3O15072 1205 aa22.24■■□□□ 1.15
TPM4-208ENST00000588410 FAM86B2P0C5J1 330 aa22.24■■□□□ 1.15
TPM4-208ENST00000588410 SETQ01105 290 aaPredicted RBP22.24■■□□□ 1.15
TPM4-208ENST00000588410 GPNMBQ14956 572 aa22.24■■□□□ 1.15
TPM4-208ENST00000588410 TRAF7Q6Q0C0 670 aa22.24■■□□□ 1.15
TPM4-208ENST00000588410 YBX2Q9Y2T7 364 aaKnown RBP22.24■■□□□ 1.15
TPM4-208ENST00000588410 EFCAB14O75071 495 aa22.23■■□□□ 1.15
TPM4-208ENST00000588410 LGR5O75473 907 aa22.23■■□□□ 1.15
TPM4-208ENST00000588410 CTSHP09668 335 aa22.23■■□□□ 1.15
TPM4-208ENST00000588410 IKBKEQ14164 716 aa22.23■■□□□ 1.15
TPM4-208ENST00000588410 GRIK4Q16099 956 aa22.23■■□□□ 1.15
TPM4-208ENST00000588410 CRYGNQ8WXF5 182 aa22.23■■□□□ 1.15
TPM4-208ENST00000588410 ZNF577Q9BSK1 485 aa22.23■■□□□ 1.15
TPM4-208ENST00000588410 TCEAL9Q9UHQ7 104 aa22.23■■□□□ 1.15
TPM4-208ENST00000588410 TRPC6Q9Y210 931 aa22.23■■□□□ 1.15
TPM4-208ENST00000588410 ABHD14A-ACY1A0A1B0GW23 586 aa22.22■■□□□ 1.15
TPM4-208ENST00000588410 IPO5O00410 1097 aaKnown RBP22.22■■□□□ 1.15
TPM4-208ENST00000588410 STAT5BP51692 787 aa22.22■■□□□ 1.15
TPM4-208ENST00000588410 PRR16Q569H4 304 aa22.22■■□□□ 1.15
TPM4-208ENST00000588410 PPP2R2DQ66LE6 453 aa22.22■■□□□ 1.15
TPM4-208ENST00000588410 TAF2Q6P1X5 1199 aa22.22■■□□□ 1.15
TPM4-208ENST00000588410 RSPH3Q86UC2 560 aa22.22■■□□□ 1.15
TPM4-208ENST00000588410 HERC6Q8IVU3 1022 aa22.22■■□□□ 1.15
TPM4-208ENST00000588410 C22orf23Q9BZE7 217 aa22.22■■□□□ 1.15
TPM4-208ENST00000588410 PCDHA4Q9UN74 947 aa22.22■■□□□ 1.15
TPM4-208ENST00000588410 IGLV3-22A0A075B6J6 115 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 RRN3P2A6NIE6 340 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 BACH1O14867 736 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 MYOGP15173 224 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 WDR5P61964 334 aaKnown RBP22.21■■□□□ 1.15
TPM4-208ENST00000588410 IGBP1P78318 339 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 ADAM17P78536 824 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 SCRN1Q12765 414 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 MBTPS1Q14703 1052 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 FAM160B1Q5W0V3 765 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 PLPPR4Q7Z2D5 763 aa22.21■■□□□ 1.15
TPM4-208ENST00000588410 MAFAQ8NHW3 353 aaPredicted RBP22.21■■□□□ 1.15
TPM4-208ENST00000588410 UIMC1Q96RL1 719 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms