RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 CHMP2AO43633 222 aa15.33■□□□□ 0.04
CNTD1-204ENST00000588408 FGFR1OPO95684 399 aaKnown RBP15.33■□□□□ 0.04
CNTD1-204ENST00000588408 MYBP10242 640 aa15.33■□□□□ 0.04
CNTD1-204ENST00000588408 RPA1P27694 616 aa15.33■□□□□ 0.04
CNTD1-204ENST00000588408 HNRNPH3P31942 346 aaKnown RBP15.33■□□□□ 0.04
CNTD1-204ENST00000588408 ZNF76P36508 570 aa15.33■□□□□ 0.04
CNTD1-204ENST00000588408 KIF11P52732 1056 aa15.33■□□□□ 0.04
CNTD1-204ENST00000588408 DMTNQ08495 405 aa15.33■□□□□ 0.04
CNTD1-204ENST00000588408 DLGAP5Q15398 846 aa15.33■□□□□ 0.04
CNTD1-204ENST00000588408 CCDC170Q8IYT3 715 aa15.33■□□□□ 0.04
CNTD1-204ENST00000588408 LARGE2Q8N3Y3 721 aa15.33■□□□□ 0.04
CNTD1-204ENST00000588408 PIGOQ8TEQ8 1089 aa15.33■□□□□ 0.04
CNTD1-204ENST00000588408 BHMT2Q9H2M3 363 aa15.33■□□□□ 0.04
CNTD1-204ENST00000588408 SUGCTQ9HAC7 445 aa15.33■□□□□ 0.04
CNTD1-204ENST00000588408 ABCB11O95342 1321 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 PRPF6O94906 941 aaKnown RBP15.32■□□□□ 0.04
CNTD1-204ENST00000588408 KCNA1Q09470 495 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 CTTNQ14247 550 aaKnown RBP15.32■□□□□ 0.04
CNTD1-204ENST00000588408 MMS19Q96T76 1030 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 STK32BQ9NY57 414 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 HERC5Q9UII4 1024 aaKnown RBP15.32■□□□□ 0.04
CNTD1-204ENST00000588408 TMX2Q9Y320 296 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 CAPN6Q9Y6Q1 641 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 RBBP6Q7Z6E9 1792 aaKnown RBP15.32■□□□□ 0.04
CNTD1-204ENST00000588408 KCNA3P22001 575 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 CIITAP33076 1130 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 CDK17Q00537 523 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 GFPT1Q06210 699 aaPredicted RBP15.32■□□□□ 0.04
CNTD1-204ENST00000588408 WHAMMP3Q1A5X7 153 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 HAUS3Q68CZ6 603 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 PDXDC1Q6P996 788 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 ANKRD13CQ8N6S4 541 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 SYT2Q8N9I0 419 aaPredicted RBP15.32■□□□□ 0.04
CNTD1-204ENST00000588408 SUPT20HQ8NEM7 779 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 FAM151AQ8WW52 585 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 EIF2AK1Q9BQI3 630 aaKnown RBP15.32■□□□□ 0.04
CNTD1-204ENST00000588408 TMOD2Q9NZR1 351 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 SALL4Q9UJQ4 1053 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 DNM3Q9UQ16 869 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 PCDHA13Q9Y5I0 950 aa15.32■□□□□ 0.04
CNTD1-204ENST00000588408 CTAGE15A4D2H0 777 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 KRT86O43790 486 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 TLR2O60603 784 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 FOSP01100 380 aaPredicted RBP15.31■□□□□ 0.04
CNTD1-204ENST00000588408 VIL1P09327 827 aaKnown RBP15.31■□□□□ 0.04
CNTD1-204ENST00000588408 CTAGE8P0CG41 777 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 DPEP1P16444 411 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 VAV2P52735 878 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 ADAM9Q13443 819 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 DGKZQ13574 1117 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 CTAGE6Q86UF2 777 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 TRIM59Q8IWR1 403 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 CTAGE4Q8IX94 777 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 TTLL6Q8N841 843 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 NEK11Q8NG66 645 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 DRC1Q96MC2 740 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 PURBQ96QR8 312 aaKnown RBP15.31■□□□□ 0.04
CNTD1-204ENST00000588408 LSM14BQ9BX40 385 aaKnown RBP15.31■□□□□ 0.04
CNTD1-204ENST00000588408 ARHGEF10LQ9HCE6 1279 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 COL2A1P02458 1487 aaPredicted RBP15.31■□□□□ 0.04
CNTD1-204ENST00000588408 KIF13BQ9NQT8 1826 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 TBX3O15119 743 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 VSNL1P62760 191 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 SPDYE2Q495Y8 402 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 HGSNATQ68CP4 663 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 FUT8Q9BYC5 575 aa15.31■□□□□ 0.04
CNTD1-204ENST00000588408 IFIH1Q9BYX4 1025 aaKnown RBP15.31■□□□□ 0.04
CNTD1-204ENST00000588408 PDE2AO00408 941 aaPredicted RBP15.3■□□□□ 0.04
CNTD1-204ENST00000588408 MOCS3O95396 460 aa15.3■□□□□ 0.04
CNTD1-204ENST00000588408 POLR2FP61218 127 aaKnown RBP15.3■□□□□ 0.04
CNTD1-204ENST00000588408 LONRF2Q1L5Z9 754 aa15.3■□□□□ 0.04
CNTD1-204ENST00000588408 NBPF9Q3BBW0 867 aa15.3■□□□□ 0.04
CNTD1-204ENST00000588408 ZNF662Q6ZS27 426 aa15.3■□□□□ 0.04
CNTD1-204ENST00000588408 CACNA2D4Q7Z3S7 1137 aa15.3■□□□□ 0.04
CNTD1-204ENST00000588408 MSANTD4Q8NCY6 345 aa15.3■□□□□ 0.04
CNTD1-204ENST00000588408 FAM20AQ96MK3 541 aa15.3■□□□□ 0.04
CNTD1-204ENST00000588408 DEF6Q9H4E7 631 aa15.3■□□□□ 0.04
CNTD1-204ENST00000588408 ARFGAP3Q9NP61 516 aa15.3■□□□□ 0.04
CNTD1-204ENST00000588408 SAR1BQ9Y6B6 198 aa15.3■□□□□ 0.04
CNTD1-204ENST00000588408 RGPD3A6NKT7 1758 aaPredicted RBP15.3■□□□□ 0.04
CNTD1-204ENST00000588408 RGPD4Q7Z3J3 1758 aa15.3■□□□□ 0.04
CNTD1-204ENST00000588408 PITPNM2Q9BZ72 1349 aa15.3■□□□□ 0.04
CNTD1-204ENST00000588408 PIK3CDO00329 1044 aa15.29■□□□□ 0.04
CNTD1-204ENST00000588408 AKR1B10O60218 316 aa15.29■□□□□ 0.04
CNTD1-204ENST00000588408 IPO7O95373 1038 aaKnown RBP15.29■□□□□ 0.04
CNTD1-204ENST00000588408 CYP3A4P08684 503 aa15.29■□□□□ 0.04
CNTD1-204ENST00000588408 ACTN1P12814 892 aa15.29■□□□□ 0.04
CNTD1-204ENST00000588408 NR2F2P24468 414 aa15.29■□□□□ 0.04
CNTD1-204ENST00000588408 KIF5AQ12840 1032 aa15.29■□□□□ 0.04
CNTD1-204ENST00000588408 SPA17Q15506 151 aa15.29■□□□□ 0.04
CNTD1-204ENST00000588408 ENOX2Q16206 610 aaKnown RBP15.29■□□□□ 0.04
CNTD1-204ENST00000588408 PAPD7Q5XG87 772 aaKnown RBP15.29■□□□□ 0.04
CNTD1-204ENST00000588408 ERMNQ8TAM6 284 aa15.29■□□□□ 0.04
CNTD1-204ENST00000588408 CEP63Q96MT8 703 aa15.29■□□□□ 0.04
CNTD1-204ENST00000588408 ZCCHC17Q9NP64 241 aaKnown RBP15.29■□□□□ 0.04
CNTD1-204ENST00000588408 WRAP73Q9P2S5 460 aaPredicted RBP15.29■□□□□ 0.04
CNTD1-204ENST00000588408 RGS17Q9UGC6 210 aaPredicted RBP15.29■□□□□ 0.04
CNTD1-204ENST00000588408 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.29■□□□□ 0.04
CNTD1-204ENST00000588408 ATAD5Q96QE3 1844 aa15.29■□□□□ 0.04
CNTD1-204ENST00000588408 SRCAPQ6ZRS2 3230 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms