RNA–Protein interactions for RNA: ENST00000588236.1

SPIRE1-212, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2

Gene SPIRE1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-212ENST00000588236 PCBP1Q15365 356 aaKnown RBP eCLIP4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 CC2D1AQ6P1N0 951 aaPredicted RBP4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 PKN3Q6P5Z2 889 aa4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 MILR1Q7Z6M3 343 aa4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 ZC3H18Q86VM9 953 aaKnown RBP4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 SPATS2Q86XZ4 545 aaKnown RBP4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 SMC1BQ8NDV3 1235 aa4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 PIP4K2CQ8TBX8 421 aa4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 DDX11Q96FC9 970 aa4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 YIPF4Q9BSR8 244 aa4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 RNF32Q9H0A6 362 aa4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 PCIF1Q9H4Z3 704 aa4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 KCNH7Q9NS40 1196 aa4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 HOMER2Q9NSB8 354 aa4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 USP36Q9P275 1121 aaKnown RBP4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 MYOTQ9UBF9 498 aa4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 ASH2LQ9UBL3 628 aa4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 KCNG1Q9UIX4 513 aa4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 SPO11Q9Y5K1 396 aa4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 OAS3Q9Y6K5 1087 aaKnown RBP4.54□□□□□ -1.68
SPIRE1-212ENST00000588236 HECW2Q9P2P5 1572 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 FKBP9O95302 570 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 EYA4O95677 639 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 MSL3P1P0C860 447 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 ITGB5P18084 799 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 TACR1P25103 407 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 SDHAP31040 664 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 FNTBP49356 437 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 SESN3P58005 492 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 PHC1P78364 1004 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 EXOSC10Q01780 885 aaKnown RBP4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 STRN3Q13033 797 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 ADGRF1Q5T601 910 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 ABHD17CQ6PCB6 329 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 MPZL3Q6UWV2 235 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 FKBP9P1Q75LS8 142 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 DDX42Q86XP3 938 aaKnown RBP eCLIP4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 CPA5Q8WXQ8 436 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 MENTQ9BUN1 341 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 ZNF552Q9H707 407 aaPredicted RBP4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 FBXL7Q9UJT9 491 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 CBLCQ9ULV8 474 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 B3GALT1Q9Y5Z6 326 aa4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 TARBP1Q13395 1621 aaKnown RBP4.53□□□□□ -1.68
SPIRE1-212ENST00000588236 FAM83GA6ND36 823 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 RBAK-RBAKDNI3L0D1 243 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 SGSM2O43147 1006 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 GPR39O43194 453 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 CYP7B1O75881 506 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 NCAM1P13591 858 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 PFKLP17858 780 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 KRT15P19012 456 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 LSP1P33241 339 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 TRHRP34981 398 aaPredicted RBP4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 JAM2P57087 298 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 IRF9Q00978 393 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 LRRC32Q14392 662 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 SKIDA1Q1XH10 827 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 ATP13A4Q4VNC1 1196 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 TIGD5Q53EQ6 642 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 BTBD8Q5XKL5 378 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 RPTNQ6XPR3 784 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 FERMT3Q86UX7 667 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 AMIGO3Q86WK7 504 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 FAM126BQ8IXS8 530 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 DLG3Q92796 817 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 TOE1Q96GM8 510 aaKnown RBP4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 GPATCH3Q96I76 525 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 WRNIP1Q96S55 665 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 SMURF1Q9HCE7 757 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 SIRT5Q9NXA8 310 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 PALD1Q9ULE6 856 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 SYNJ1O43426 1573 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 PHLDB1Q86UU1 1377 aa4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 TDRD9Q8NDG6 1382 aaKnown RBP4.52□□□□□ -1.69
SPIRE1-212ENST00000588236 SNAPC4Q5SXM2 1469 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 TCRBV5S2A0A599 114 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 ZC3H12DA2A288 527 aaKnown RBP4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 NUDT19A8MXV4 375 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 MAN2B1O00754 1011 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 NKRFO15226 690 aaKnown RBP eCLIP4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 RAB11FIP3O75154 756 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 SEMA7AO75326 666 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 AMY2AP04746 511 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 COL6A2P12110 1019 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 AMY2BP19961 511 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 CD40P25942 277 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 NKX3-2P78367 333 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 PRR5P85299 388 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 TUSC3Q13454 348 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 STAT4Q14765 748 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 ETV3LQ6ZN32 361 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 PTRH1Q86Y79 214 aaKnown RBP4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 MIB1Q86YT6 1006 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 SIRT2Q8IXJ6 389 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 CISD2Q8N5K1 135 aaKnown RBP4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 PRPF38AQ8NAV1 312 aaKnown RBP4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 FAM168AQ92567 244 aa4.51□□□□□ -1.69
SPIRE1-212ENST00000588236 WNT8AQ9H1J5 351 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms