RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	NAT1	P18440	290 aa		10.4	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	GUCY2D	Q02846	1103 aa		10.4	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	MPP3	Q13368	585 aa		10.4	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	RASGRF1	Q13972	1273 aa		10.4	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	TSR1	Q2NL82	804 aa	Known RBP	10.4	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ANKRD20A8P	Q5CZ79	823 aa		10.4	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	EARS2	Q5JPH6	523 aa	Known RBP	10.4	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ALS2CL	Q60I27	953 aa		10.4	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	CIAPIN1	Q6FI81	312 aa		10.4	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	C8orf74	Q6P047	294 aa		10.4	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	EPB41L5	Q9HCM4	733 aa		10.4	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	LRP2BP	Q9P2M1	347 aa		10.4	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	USP17L3	A6NCW0	530 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	USP17L4	A6NCW7	530 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ZNF263	O14978	683 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	GPAA1	O43292	621 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	SCTR	P47872	440 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	SSRP1	Q08945	709 aa	Known RBP	10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	DPY19L2	Q6NUT2	758 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	C15orf52	Q6ZUT6	534 aa	Known RBP	10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	USP17L1	Q7RTZ2	530 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	MMGT1	Q8N4V1	131 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	SPATA5	Q8NB90	893 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	C17orf50	Q8WW18	174 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	SRPRB	Q9Y5M8	271 aa	Known RBP	10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	IDH1	O75874	414 aa	Known RBP	10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	MMP1	P03956	469 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ZAP70	P43403	619 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	PRELP	P51888	382 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	PMS1	P54277	932 aa	Known RBP	10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	TMEM62	Q0P6H9	643 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	TNIP1	Q15025	636 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	SAFB	Q15424	915 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	MFSD14B	Q5SR56	506 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	EMB	Q6PCB8	327 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	IQCK	Q8N0W5	287 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	CUL5	Q93034	780 aa		10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ACTR5	Q9H9F9	607 aa	Predicted RBP	10.39	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	KIAA1551	Q9HCM1	1747 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	LINGO3	P0C6S8	592 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	MCAM	P43121	646 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	CXCL9	Q07325	125 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	SFSWAP	Q12872	951 aa	Known RBP	10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	KANK3	Q6NY19	840 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	NUP58	Q9BVL2	599 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	MXD3	Q9BW11	206 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	SUN2	Q9UH99	717 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	DLEC1	Q9Y238	1755 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	PHF20L1	A8MW92	1017 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	NKRF	O15226	690 aa	Known RBP eCLIP	10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ANP32D	O95626	131 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	PARP1	P09874	1014 aa	Known RBP	10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	CTCF	P49711	727 aa	Predicted RBP	10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	KIF5A	Q12840	1032 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	PAK1	Q13153	545 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ITGB3BP	Q13352	177 aa	Predicted RBP	10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	TMEM67	Q5HYA8	995 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	IQCE	Q6IPM2	695 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	MTHFD1L	Q6UB35	978 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	IRF2BP1	Q8IU81	584 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	MB21D1	Q8N884	522 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	WDR66	Q8TBY9	1149 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	SLX1A	Q9BQ83	275 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	FAM167B	Q9BTA0	163 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	NOD2	Q9HC29	1040 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	C15orf41	Q9Y2V0	281 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	YDJC	A8MPS7	323 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	TRIM21	P19474	475 aa	Known RBP	10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	VAV2	P52735	878 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	KRT83	P78385	493 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	PPP1R7	Q15435	360 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	TAX1BP1	Q86VP1	789 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	PHC3	Q8NDX5	983 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ATP6V1G3	Q96LB4	118 aa		10.38	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	SEMA3E	O15041	775 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	CREB3	O43889	395 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	HEXIM1	O94992	359 aa	Known RBP	10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	CLTA	P09496	248 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	IL1R1	P14778	569 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	BYSL	Q13895	437 aa	Known RBP	10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	PNMA8A	Q86V59	439 aa	Predicted RBP	10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	DNAJC7	Q99615	494 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	PAGR1	Q9BTK6	254 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	PLAA	Q9Y263	795 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077		A6NNZ2	444 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	BUB1	O43683	1085 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ATP4A	P20648	1035 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	DRP2	Q13474	957 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	ZNF174	Q15697	407 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	TUBB8	Q3ZCM7	444 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	RILPL1	Q5EBL4	403 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	DZIP1	Q86YF9	867 aa	Known RBP	10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	GALNT15	Q8N3T1	639 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	EHBP1	Q8NDI1	1231 aa		10.37	□□□□□ -0.75
CACNA2D4-223	ENST00000588077	NOC3L	Q8WTT2	800 aa	Known RBP	10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms