RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 MARK3P27448 753 aa16.44■□□□□ 0.22
VMP1-206ENST00000587945 NAPAP54920 295 aa16.44■□□□□ 0.22
VMP1-206ENST00000587945 ADAM17P78536 824 aa16.44■□□□□ 0.22
VMP1-206ENST00000587945 MRPS5P82675 430 aaKnown RBP16.44■□□□□ 0.22
VMP1-206ENST00000587945 GRB10Q13322 594 aa16.44■□□□□ 0.22
VMP1-206ENST00000587945 MTMR1Q13613 665 aa16.44■□□□□ 0.22
VMP1-206ENST00000587945 SKIV2LQ15477 1246 aaKnown RBP16.44■□□□□ 0.22
VMP1-206ENST00000587945 PLEKHG4Q58EX7 1191 aa16.44■□□□□ 0.22
VMP1-206ENST00000587945 GIMAP8Q8ND71 665 aaPredicted RBP16.44■□□□□ 0.22
VMP1-206ENST00000587945 CYP2W1Q8TAV3 490 aa16.44■□□□□ 0.22
VMP1-206ENST00000587945 SEPT1Q8WYJ6 367 aa16.44■□□□□ 0.22
VMP1-206ENST00000587945 CDHR1Q96JP9 859 aa16.44■□□□□ 0.22
VMP1-206ENST00000587945 RAD9AQ99638 391 aa16.44■□□□□ 0.22
VMP1-206ENST00000587945 JADE2Q9NQC1 790 aa16.44■□□□□ 0.22
VMP1-206ENST00000587945 FAM217BQ9NTX9 383 aaPredicted RBP16.44■□□□□ 0.22
VMP1-206ENST00000587945 NAP1L2Q9ULW6 460 aaPredicted RBP16.44■□□□□ 0.22
VMP1-206ENST00000587945 GOLGA8AA7E2F4 631 aa16.43■□□□□ 0.22
VMP1-206ENST00000587945 GOLGA8BA8MQT2 603 aa16.43■□□□□ 0.22
VMP1-206ENST00000587945 LPXNO60711 386 aa16.43■□□□□ 0.22
VMP1-206ENST00000587945 POU3F3P20264 500 aaPredicted RBP16.43■□□□□ 0.22
VMP1-206ENST00000587945 CDC27P30260 824 aa16.43■□□□□ 0.22
VMP1-206ENST00000587945 TFF2Q03403 129 aa16.43■□□□□ 0.22
VMP1-206ENST00000587945 MKRN4PQ13434 485 aaPredicted RBP16.43■□□□□ 0.22
VMP1-206ENST00000587945 RUFY4Q6ZNE9 571 aa16.43■□□□□ 0.22
VMP1-206ENST00000587945 MYOCDQ8IZQ8 938 aa16.43■□□□□ 0.22
VMP1-206ENST00000587945 GDPD5Q8WTR4 605 aa16.43■□□□□ 0.22
VMP1-206ENST00000587945 RIC8AQ9NPQ8 531 aa16.43■□□□□ 0.22
VMP1-206ENST00000587945 GBF1Q92538 1859 aa16.43■□□□□ 0.22
VMP1-206ENST00000587945 TRIP12Q14669 1992 aaPredicted RBP16.42■□□□□ 0.22
VMP1-206ENST00000587945 TTC28Q96AY4 2481 aa16.42■□□□□ 0.22
VMP1-206ENST00000587945 STXBP3O00186 592 aa16.42■□□□□ 0.22
VMP1-206ENST00000587945 PPFIA1Q13136 1202 aa16.42■□□□□ 0.22
VMP1-206ENST00000587945 KRT32Q14532 448 aa16.42■□□□□ 0.22
VMP1-206ENST00000587945 SEPT8Q92599 483 aa16.42■□□□□ 0.22
VMP1-206ENST00000587945 GLG1Q92896 1179 aa16.42■□□□□ 0.22
VMP1-206ENST00000587945 TSPYL2Q9H2G4 693 aaPredicted RBP16.42■□□□□ 0.22
VMP1-206ENST00000587945 EHMT1Q9H9B1 1298 aa16.42■□□□□ 0.22
VMP1-206ENST00000587945 TMEM260Q9NX78 707 aa16.42■□□□□ 0.22
VMP1-206ENST00000587945 NRCAMQ92823 1304 aa16.42■□□□□ 0.22
VMP1-206ENST00000587945 MYH7BA7E2Y1 1941 aa16.41■□□□□ 0.22
VMP1-206ENST00000587945 LINC01553A4QN01 128 aa16.41■□□□□ 0.22
VMP1-206ENST00000587945 SMCO2A6NFE2 343 aa16.41■□□□□ 0.22
VMP1-206ENST00000587945 CAND2O75155 1236 aa16.41■□□□□ 0.22
VMP1-206ENST00000587945 AMHP03971 560 aa16.41■□□□□ 0.22
VMP1-206ENST00000587945 ARP10275 920 aa16.41■□□□□ 0.22
VMP1-206ENST00000587945 ADD1P35611 737 aaKnown RBP16.41■□□□□ 0.22
VMP1-206ENST00000587945 ADCY7P51828 1080 aa16.41■□□□□ 0.22
VMP1-206ENST00000587945 ZBTB10Q96DT7 871 aa16.41■□□□□ 0.22
VMP1-206ENST00000587945 PCYT2Q99447 389 aa16.41■□□□□ 0.22
VMP1-206ENST00000587945 MXRA8Q9BRK3 442 aa16.41■□□□□ 0.22
VMP1-206ENST00000587945 ANO3Q9BYT9 981 aa16.41■□□□□ 0.22
VMP1-206ENST00000587945 KCNH7Q9NS40 1196 aa16.41■□□□□ 0.22
VMP1-206ENST00000587945 CHRNA1P02708 482 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 ERVK-21P61565 698 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 IGBP1P78318 339 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 FGD1P98174 961 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 APOBRQ0VD83 1088 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 GRIK4Q16099 956 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 FAM26DQ5JW98 314 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 PPP1R18Q6NYC8 613 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 ADAMTS19Q8TE59 1207 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 KCNB2Q92953 911 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 JAKMIP1Q96N16 626 aaKnown RBP16.4■□□□□ 0.22
VMP1-206ENST00000587945 TGS1Q96RS0 853 aaKnown RBP16.4■□□□□ 0.22
VMP1-206ENST00000587945 C17orf80Q9BSJ5 609 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 SMARCAD1Q9H4L7 1026 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 SUGCTQ9HAC7 445 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 JPH1Q9HDC5 661 aaPredicted RBP16.4■□□□□ 0.22
VMP1-206ENST00000587945 BARHL2Q9NY43 387 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 ERAP1Q9NZ08 941 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 INSL6Q9Y581 213 aa16.4■□□□□ 0.22
VMP1-206ENST00000587945 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.39■□□□□ 0.21
VMP1-206ENST00000587945 MAFGO15525 162 aa16.39■□□□□ 0.21
VMP1-206ENST00000587945 UPP2O95045 317 aa16.39■□□□□ 0.21
VMP1-206ENST00000587945 HMGB1P09429 215 aaKnown RBP16.39■□□□□ 0.21
VMP1-206ENST00000587945 GHRP10912 638 aa16.39■□□□□ 0.21
VMP1-206ENST00000587945 MARCH8Q5T0T0 291 aa16.39■□□□□ 0.21
VMP1-206ENST00000587945 Q6ZUG5 572 aa16.39■□□□□ 0.21
VMP1-206ENST00000587945 DNAJB3Q8WWF6 145 aa16.39■□□□□ 0.21
VMP1-206ENST00000587945 CCDC136Q96JN2 1154 aa16.39■□□□□ 0.21
VMP1-206ENST00000587945 NECAB3Q96P71 396 aaPredicted RBP16.39■□□□□ 0.21
VMP1-206ENST00000587945 SLC9A2Q9UBY0 812 aa16.39■□□□□ 0.21
VMP1-206ENST00000587945 SNX14Q9Y5W7 946 aa16.39■□□□□ 0.21
VMP1-206ENST00000587945 PRRC2BQ5JSZ5 2229 aaKnown RBP16.38■□□□□ 0.21
VMP1-206ENST00000587945 TNFRSF10AO00220 468 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 ADAMTS3O15072 1205 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 PPFIA3O75145 1194 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 FOSP01100 380 aaPredicted RBP16.38■□□□□ 0.21
VMP1-206ENST00000587945 INSRRP14616 1297 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 HSPA4P34932 840 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 METAP2P50579 478 aaKnown RBP eCLIP16.38■□□□□ 0.21
VMP1-206ENST00000587945 KCNQ1P51787 676 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 HTRA4P83105 476 aaPredicted RBP16.38■□□□□ 0.21
VMP1-206ENST00000587945 ITGB3BPQ13352 177 aaPredicted RBP16.38■□□□□ 0.21
VMP1-206ENST00000587945 CEP55Q53EZ4 464 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 JAKMIP3Q5VZ66 844 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 TAF2Q6P1X5 1199 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 IL27Q8NEV9 243 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 BRF1Q92994 677 aa16.38■□□□□ 0.21
VMP1-206ENST00000587945 TOP1MTQ969P6 601 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms