RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 USP17L8P0C7I0 530 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 TSPY3P0CV98 308 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 TSPY8P0CW00 308 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 PDIA5Q14554 519 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 TATDN2Q93075 761 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 CNOT10Q9H9A5 744 aaKnown RBP18.04■□□□□ 0.48
RANBP3-209ENST00000587411 DNM1LO00429 736 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 SLC8A1P32418 973 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 XRCC4Q13426 336 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 TRIM59Q8IWR1 403 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 OR2W6PQ8NHA6 318 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 RAPGEF5Q92565 580 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 PACSIN1Q9BY11 444 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 SLITRK6Q9H5Y7 841 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 MINPP1Q9UNW1 487 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.03■□□□□ 0.48
RANBP3-209ENST00000587411 ESYT2A0FGR8 921 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 SART1O43290 800 aaKnown RBP18.03■□□□□ 0.48
RANBP3-209ENST00000587411 CEP104O60308 925 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 EZRP15311 586 aaKnown RBP18.03■□□□□ 0.48
RANBP3-209ENST00000587411 QPCTQ16769 361 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 KRT79Q5XKE5 535 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 INTS5Q6P9B9 1019 aaKnown RBP18.03■□□□□ 0.48
RANBP3-209ENST00000587411 REXO1Q8N1G1 1221 aaKnown RBP18.03■□□□□ 0.48
RANBP3-209ENST00000587411 UBLCP1Q8WVY7 318 aaPredicted RBP18.03■□□□□ 0.48
RANBP3-209ENST00000587411 TMEM47Q9BQJ4 181 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.03■□□□□ 0.487e-8■■□□□ 12.9
RANBP3-209ENST00000587411 KDM4CQ9H3R0 1056 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 VEZTQ9HBM0 779 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 FBXL5Q9UKA1 691 aa18.03■□□□□ 0.48
RANBP3-209ENST00000587411 BZW2Q9Y6E2 419 aaKnown RBP18.03■□□□□ 0.48
RANBP3-209ENST00000587411 ATP8B3O60423 1300 aa18.02■□□□□ 0.48
RANBP3-209ENST00000587411 A0A0G2JS52 829 aa18.02■□□□□ 0.48
RANBP3-209ENST00000587411 WTIPA6NIX2 430 aaPredicted RBP18.02■□□□□ 0.48
RANBP3-209ENST00000587411 ERCC3P19447 782 aa18.02■□□□□ 0.48
RANBP3-209ENST00000587411 SCTRP47872 440 aa18.02■□□□□ 0.48
RANBP3-209ENST00000587411 LRRC41Q15345 812 aa18.02■□□□□ 0.48
RANBP3-209ENST00000587411 TMEM119Q4V9L6 283 aa18.02■□□□□ 0.48
RANBP3-209ENST00000587411 SPDYCQ5MJ68 293 aa18.02■□□□□ 0.48
RANBP3-209ENST00000587411 BCCIPQ9P287 314 aaKnown RBP eCLIP18.02■□□□□ 0.48
RANBP3-209ENST00000587411 SEC63Q9UGP8 760 aaKnown RBP18.02■□□□□ 0.48
RANBP3-209ENST00000587411 USP17L3A6NCW0 530 aa18.02■□□□□ 0.47
RANBP3-209ENST00000587411 USP17L4A6NCW7 530 aa18.02■□□□□ 0.47
RANBP3-209ENST00000587411 DNAJC8O75937 253 aaPredicted RBP18.02■□□□□ 0.47
RANBP3-209ENST00000587411 TMOD1P28289 359 aa18.02■□□□□ 0.47
RANBP3-209ENST00000587411 SMARCA1P28370 1054 aa18.02■□□□□ 0.47
RANBP3-209ENST00000587411 MRPL12P52815 198 aaKnown RBP18.02■□□□□ 0.47
RANBP3-209ENST00000587411 NBPF9Q3BBW0 867 aa18.02■□□□□ 0.47
RANBP3-209ENST00000587411 USP17L1Q7RTZ2 530 aa18.02■□□□□ 0.47
RANBP3-209ENST00000587411 ZNF444Q8N0Y2 327 aaPredicted RBP18.02■□□□□ 0.47
RANBP3-209ENST00000587411 FAM133AQ8N9E0 248 aa18.02■□□□□ 0.47
RANBP3-209ENST00000587411 NOVA2Q9UNW9 492 aaKnown RBP18.02■□□□□ 0.47
RANBP3-209ENST00000587411 COL4A1P02462 1669 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 MAST2Q6P0Q8 1798 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 EIF3BP55884 814 aaKnown RBP18.01■□□□□ 0.47
RANBP3-209ENST00000587411 COASYQ13057 564 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 SF3B3Q15393 1217 aaKnown RBP18.01■□□□□ 0.47
RANBP3-209ENST00000587411 LRRC57Q8N9N7 239 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 CCDC26Q8TAB7 109 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 SNX29Q8TEQ0 813 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 N4BP2L2Q92802 583 aaPredicted RBP18.01■□□□□ 0.47
RANBP3-209ENST00000587411 CENPTQ96BT3 561 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 GANQ9H2C0 597 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 HAUS2Q9NVX0 235 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 ANXA13P27216 316 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 PRDX5P30044 214 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 ARID5AQ03989 594 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 BYSLQ13895 437 aaKnown RBP18.01■□□□□ 0.47
RANBP3-209ENST00000587411 FAM26FQ5R3K3 315 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 TMC3Q7Z5M5 1100 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 CPLX4Q7Z7G2 160 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 LMBR1Q8WVP7 490 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 SEC14L1Q92503 715 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 FAM114A2Q9NRY5 505 aa18.01■□□□□ 0.47
RANBP3-209ENST00000587411 CNOT8Q9UFF9 292 aaKnown RBP18.01■□□□□ 0.47
RANBP3-209ENST00000587411 NOC2LQ9Y3T9 749 aaKnown RBP18.01■□□□□ 0.47
RANBP3-209ENST00000587411 DDX42Q86XP3 938 aaKnown RBP eCLIP18■□□□□ 0.47
RANBP3-209ENST00000587411 DYNLL2Q96FJ2 89 aa18■□□□□ 0.47
RANBP3-209ENST00000587411 PSMD1Q99460 953 aa18■□□□□ 0.47
RANBP3-209ENST00000587411 NEUROG2Q9H2A3 272 aa18■□□□□ 0.47
RANBP3-209ENST00000587411 TPX2Q9ULW0 747 aaKnown RBP18■□□□□ 0.47
RANBP3-209ENST00000587411 STX8Q9UNK0 236 aa18■□□□□ 0.47
RANBP3-209ENST00000587411 hCG_1984214I3L0E3 225 aa18■□□□□ 0.47
RANBP3-209ENST00000587411 KRIT1O00522 736 aa18■□□□□ 0.47
RANBP3-209ENST00000587411 EPS15P42566 896 aa18■□□□□ 0.47
RANBP3-209ENST00000587411 SPTY2D1Q68D10 685 aaPredicted RBP18■□□□□ 0.47
RANBP3-209ENST00000587411 CEP57Q86XR8 500 aa18■□□□□ 0.47
RANBP3-209ENST00000587411 RASGEF1CQ8N431 466 aa18■□□□□ 0.47
RANBP3-209ENST00000587411 ZNF713Q8N859 430 aaPredicted RBP18■□□□□ 0.47
RANBP3-209ENST00000587411 GLIS3Q8NEA6 775 aa18■□□□□ 0.47
RANBP3-209ENST00000587411 CCT6BQ92526 530 aa18■□□□□ 0.47
RANBP3-209ENST00000587411 MTMR7Q9Y216 660 aa18■□□□□ 0.47
RANBP3-209ENST00000587411 GOLGA8HP0CJ92 632 aa17.99■□□□□ 0.47
RANBP3-209ENST00000587411 DRD4P21917 467 aa17.99■□□□□ 0.47
RANBP3-209ENST00000587411 HIBADHP31937 336 aaKnown RBP17.99■□□□□ 0.47
RANBP3-209ENST00000587411 MAGOHP61326 146 aaKnown RBP17.99■□□□□ 0.47
RANBP3-209ENST00000587411 KRT71Q3SY84 523 aa17.99■□□□□ 0.47
RANBP3-209ENST00000587411 MAGOHBQ96A72 148 aaKnown RBP17.99■□□□□ 0.47
RANBP3-209ENST00000587411 HVCN1Q96D96 273 aa17.99■□□□□ 0.47
RANBP3-209ENST00000587411 DNAJC19Q96DA6 116 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms