RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 SETD4Q9NVD3 440 aa18.42■□□□□ 0.54
CXXC1-209ENST00000587342 ATP2A2P16615 1042 aaKnown RBP18.41■□□□□ 0.54
CXXC1-209ENST00000587342 IFNAR1P17181 557 aa18.41■□□□□ 0.54
CXXC1-209ENST00000587342 ADAM17P78536 824 aa18.41■□□□□ 0.54
CXXC1-209ENST00000587342 AP3B2Q13367 1082 aa18.41■□□□□ 0.54
CXXC1-209ENST00000587342 TEX2Q8IWB9 1127 aa18.41■□□□□ 0.54
CXXC1-209ENST00000587342 GIMAP8Q8ND71 665 aaPredicted RBP18.41■□□□□ 0.54
CXXC1-209ENST00000587342 RASGRP4Q8TDF6 673 aa18.41■□□□□ 0.54
CXXC1-209ENST00000587342 LMBR1Q8WVP7 490 aa18.41■□□□□ 0.54
CXXC1-209ENST00000587342 ATP6V0A1Q93050 837 aa18.41■□□□□ 0.54
CXXC1-209ENST00000587342 SLC26A6Q9BXS9 759 aa18.41■□□□□ 0.54
CXXC1-209ENST00000587342 FTOQ9C0B1 505 aaKnown RBP eCLIP18.41■□□□□ 0.54
CXXC1-209ENST00000587342 EHMT1Q9H9B1 1298 aa18.41■□□□□ 0.54
CXXC1-209ENST00000587342 CYP46A1Q9Y6A2 500 aa18.41■□□□□ 0.54
CXXC1-209ENST00000587342 FAM86B1E9PN63 330 aa18.4■□□□□ 0.54
CXXC1-209ENST00000587342 ARHGEF15O94989 841 aa18.4■□□□□ 0.54
CXXC1-209ENST00000587342 FOSP01100 380 aaPredicted RBP18.4■□□□□ 0.54
CXXC1-209ENST00000587342 FAM86B2P0C5J1 330 aa18.4■□□□□ 0.54
CXXC1-209ENST00000587342 ARHGAP4P98171 946 aa18.4■□□□□ 0.54
CXXC1-209ENST00000587342 RAB30Q15771 203 aa18.4■□□□□ 0.54
CXXC1-209ENST00000587342 CEP55Q53EZ4 464 aa18.4■□□□□ 0.54
CXXC1-209ENST00000587342 TMCO2Q7Z6W1 182 aaPredicted RBP18.4■□□□□ 0.54
CXXC1-209ENST00000587342 RNF26Q9BY78 433 aaPredicted RBP18.4■□□□□ 0.54
CXXC1-209ENST00000587342 AGO4Q9HCK5 861 aaKnown RBP18.4■□□□□ 0.54
CXXC1-209ENST00000587342 JPH1Q9HDC5 661 aaPredicted RBP18.4■□□□□ 0.54
CXXC1-209ENST00000587342 IGLV3-22A0A075B6J6 115 aa18.39■□□□□ 0.53
CXXC1-209ENST00000587342 MEIS1O00470 390 aa18.39■□□□□ 0.53
CXXC1-209ENST00000587342 EDIL3O43854 480 aa18.39■□□□□ 0.53
CXXC1-209ENST00000587342 MARK3P27448 753 aa18.39■□□□□ 0.53
CXXC1-209ENST00000587342 THPOP40225 353 aa18.39■□□□□ 0.53
CXXC1-209ENST00000587342 SEPT1Q8WYJ6 367 aa18.39■□□□□ 0.53
CXXC1-209ENST00000587342 UIMC1Q96RL1 719 aa18.39■□□□□ 0.53
CXXC1-209ENST00000587342 VPS54Q9P1Q0 977 aa18.39■□□□□ 0.53
CXXC1-209ENST00000587342 ZNF215Q9UL58 517 aaPredicted RBP18.39■□□□□ 0.53
CXXC1-209ENST00000587342 SIP14410 1827 aa18.39■□□□□ 0.53
CXXC1-209ENST00000587342 DTNBO60941 627 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 LGR5O75473 907 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 CCNE2O96020 404 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 ACTN1P12814 892 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 FOSL2P15408 326 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 WDR5P61964 334 aaKnown RBP18.38■□□□□ 0.53
CXXC1-209ENST00000587342 DEFB103AP81534 67 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 MKRN4PQ13434 485 aaPredicted RBP18.38■□□□□ 0.53
CXXC1-209ENST00000587342 RUFY4Q6ZNE9 571 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 REXO1Q8N1G1 1221 aaKnown RBP18.38■□□□□ 0.53
CXXC1-209ENST00000587342 MAFAQ8NHW3 353 aaPredicted RBP18.38■□□□□ 0.53
CXXC1-209ENST00000587342 ZBTB10Q96DT7 871 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 GLT8D2Q9H1C3 349 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 PRDM12Q9H4Q4 367 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 SLC9A2Q9UBY0 812 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 MSRAQ9UJ68 235 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 PCDHA11Q9Y5I1 949 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 NFASCO94856 1347 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 EMSYQ7Z589 1322 aa18.38■□□□□ 0.53
CXXC1-209ENST00000587342 UNC80Q8N2C7 3258 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 MAFGO15525 162 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 BAIAP3O94812 1187 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 CTSHP09668 335 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 ACTR2P61160 394 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 STK3Q13188 491 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 ADGRE1Q14246 886 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 CNKSR3Q6P9H4 555 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 SPRED2Q7Z698 418 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 HERC6Q8IVU3 1022 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 USP38Q8NB14 1042 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 SLC17A8Q8NDX2 589 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 AIFM3Q96NN9 605 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 SLC9A7Q96T83 725 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 PDRG1Q9NUG6 133 aa18.37■□□□□ 0.53
CXXC1-209ENST00000587342 RSPH10B2B2RC85 870 aa18.36■□□□□ 0.53
CXXC1-209ENST00000587342 DHX15O43143 795 aaKnown RBP18.36■□□□□ 0.53
CXXC1-209ENST00000587342 CA3P07451 260 aa18.36■□□□□ 0.53
CXXC1-209ENST00000587342 CYP3A4P08684 503 aa18.36■□□□□ 0.53
CXXC1-209ENST00000587342 RSPH10BP0C881 870 aa18.36■□□□□ 0.53
CXXC1-209ENST00000587342 PPFIA1Q13136 1202 aa18.36■□□□□ 0.53
CXXC1-209ENST00000587342 NPY5RQ15761 445 aa18.36■□□□□ 0.53
CXXC1-209ENST00000587342 MARCH8Q5T0T0 291 aa18.36■□□□□ 0.53
CXXC1-209ENST00000587342 NIPA1Q7RTP0 329 aa18.36■□□□□ 0.53
CXXC1-209ENST00000587342 ZNF274Q96GC6 653 aaPredicted RBP18.36■□□□□ 0.53
CXXC1-209ENST00000587342 C6orf50Q9HD87 102 aa18.36■□□□□ 0.53
CXXC1-209ENST00000587342 ERAP1Q9NZ08 941 aa18.36■□□□□ 0.53
CXXC1-209ENST00000587342 PRUNE2Q8WUY3 3088 aa18.36■□□□□ 0.53
CXXC1-209ENST00000587342 NRCAMQ92823 1304 aa18.35■□□□□ 0.53
CXXC1-209ENST00000587342 DDX39AO00148 427 aaKnown RBP18.35■□□□□ 0.53
CXXC1-209ENST00000587342 SEC24BO95487 1268 aa18.35■□□□□ 0.53
CXXC1-209ENST00000587342 CENPBP07199 599 aaPredicted RBP18.35■□□□□ 0.53
CXXC1-209ENST00000587342 GRIK4Q16099 956 aa18.35■□□□□ 0.53
CXXC1-209ENST00000587342 PPP2R2DQ66LE6 453 aa18.35■□□□□ 0.53
CXXC1-209ENST00000587342 PLA2G4DQ86XP0 818 aa18.35■□□□□ 0.53
CXXC1-209ENST00000587342 PHOSPHO2Q8TCD6 241 aa18.35■□□□□ 0.53
CXXC1-209ENST00000587342 CCDC12Q8WUD4 166 aaPredicted RBP18.35■□□□□ 0.53
CXXC1-209ENST00000587342 GLG1Q92896 1179 aa18.35■□□□□ 0.53
CXXC1-209ENST00000587342 LENG9Q96B70 501 aa18.35■□□□□ 0.53
CXXC1-209ENST00000587342 SDF4Q9BRK5 362 aa18.35■□□□□ 0.53
CXXC1-209ENST00000587342 SLC28A3Q9HAS3 691 aa18.35■□□□□ 0.53
CXXC1-209ENST00000587342 TPCN1Q9ULQ1 816 aa18.35■□□□□ 0.53
CXXC1-209ENST00000587342 CUL9Q8IWT3 2517 aa18.35■□□□□ 0.53
CXXC1-209ENST00000587342 A0A0C4DFX4 3053 aa18.34■□□□□ 0.53
CXXC1-209ENST00000587342 LCHNA4D1U4 455 aa18.34■□□□□ 0.53
CXXC1-209ENST00000587342 MBLAC1A4D2B0 266 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms