RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 TRIM71Q2Q1W2 868 aaKnown RBP8.98□□□□□ -0.97
VMP1-204ENST00000587259 QRICH1Q2TAL8 776 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 BRDTQ58F21 947 aaPredicted RBP8.98□□□□□ -0.97
VMP1-204ENST00000587259 PPP4R3BQ5MIZ7 849 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 ADGRF4Q8IZF3 695 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 HS6ST3Q8IZP7 471 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 TMTC2Q8N394 836 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 FAM184AQ8NB25 1140 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 DNERQ8NFT8 737 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 IL31RAQ8NI17 732 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 ANKS1AQ92625 1134 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 BRF1Q92994 677 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 TCP11L1Q9NUJ3 509 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 GTF2IRD1Q9UHL9 959 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 COG5Q9UP83 839 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 TELO2Q9Y4R8 837 aa8.98□□□□□ -0.97
VMP1-204ENST00000587259 B4E1Z4 1266 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 H3BQ06 376 aaPredicted RBP8.97□□□□□ -0.97
VMP1-204ENST00000587259 OPLAHO14841 1288 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 PRC1O43663 620 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 KPNA6O60684 536 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 KDM4AO75164 1064 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 RGS20O76081 388 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 BAIAP3O94812 1187 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 GJB5O95377 273 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 MBD3O95983 291 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 CFBP00751 764 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 ZSCAN22P10073 491 aaPredicted RBP8.97□□□□□ -0.97
VMP1-204ENST00000587259 NCLP19338 710 aaKnown RBP8.97□□□□□ -0.97
VMP1-204ENST00000587259 LIFRP42702 1097 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 PTPN11Q06124 597 aaPredicted RBP8.97□□□□□ -0.97
VMP1-204ENST00000587259 MFSD10Q14728 455 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 KIAA0753Q2KHM9 967 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 CNKSR3Q6P9H4 555 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 SYNE3Q6ZMZ3 975 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 STAG2Q8N3U4 1231 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 C7orf31Q8N865 590 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 PNMA1Q8ND90 353 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.97□□□□□ -0.97
VMP1-204ENST00000587259 TMC2Q8TDI7 906 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 AFAP1L1Q8TED9 768 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 ESR2Q92731 530 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 RMDN3Q96TC7 470 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 UBE2ZQ9H832 354 aaPredicted RBP8.97□□□□□ -0.97
VMP1-204ENST00000587259 DDX41Q9UJV9 622 aaKnown RBP8.97□□□□□ -0.97
VMP1-204ENST00000587259 NID2Q14112 1375 aa8.97□□□□□ -0.97
VMP1-204ENST00000587259 LOC102724159A0A0B4J2E5 919 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 CCDC196A0A1B0GTZ2 297 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 PPP1R11O60927 126 aaPredicted RBP8.96□□□□□ -0.98
VMP1-204ENST00000587259 LGR5O75473 907 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 UPP2O95045 317 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 LARGE1O95461 756 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 CXCL10P02778 98 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 CTSHP09668 335 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 MYCLP12524 364 aaPredicted RBP8.96□□□□□ -0.98
VMP1-204ENST00000587259 SYT1P21579 422 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 HOXA13P31271 388 aaPredicted RBP8.96□□□□□ -0.98
VMP1-204ENST00000587259 ERVK-21P61565 698 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 SP2Q02086 613 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 PWP2Q15269 919 aaKnown RBP8.96□□□□□ -0.98
VMP1-204ENST00000587259 STXBP2Q15833 593 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 DGKDQ16760 1214 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 HSDL1Q3SXM5 330 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 CCDC178Q5BJE1 867 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 ARHGEF16Q5VV41 709 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 LARP1BQ659C4 914 aaKnown RBP8.96□□□□□ -0.98
VMP1-204ENST00000587259 EP400NLQ6ZTU2 488 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 SESTD1Q86VW0 696 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 SGMS1Q86VZ5 419 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 IQCA1Q86XH1 822 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 MYOCDQ8IZQ8 938 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 CCDC155Q8N6L0 562 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 DBF4BQ8NFT6 615 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 CAGE1Q8TC20 777 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 NSUN6Q8TEA1 469 aaKnown RBP8.96□□□□□ -0.98
VMP1-204ENST00000587259 UIMC1Q96RL1 719 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 TGS1Q96RS0 853 aaKnown RBP8.96□□□□□ -0.98
VMP1-204ENST00000587259 RAD9AQ99638 391 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 UBAC1Q9BSL1 405 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 JMJD4Q9H9V9 463 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 PXMP2Q9NR77 195 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 HCN4Q9Y3Q4 1203 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 MRVI1Q9Y6F6 885 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 TAF6LQ9Y6J9 622 aa8.96□□□□□ -0.98
VMP1-204ENST00000587259 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.95□□□□□ -0.98
VMP1-204ENST00000587259 GOLGA8BA8MQT2 603 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 PI4K2BG5E9Z4 385 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 HAS3O00219 553 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 CPLX1O14810 134 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 TRAK2O60296 914 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 F13A1P00488 732 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 F2P00734 622 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 NR3C2P08235 984 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 SSTR3P32745 418 aaPredicted RBP8.95□□□□□ -0.98
VMP1-204ENST00000587259 THPOP40225 353 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 SLC35G1Q2M3R5 365 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 KLHL40Q2TBA0 621 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 ALYREFQ86V81 257 aaKnown RBP8.95□□□□□ -0.98
VMP1-204ENST00000587259 FBXO11Q86XK2 927 aa8.95□□□□□ -0.98
VMP1-204ENST00000587259 DHX37Q8IY37 1157 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms