RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 RTP2Q5QGT7 225 aa7.97□□□□□ -1.13
TPM4-203ENST00000586193 ANGEL2Q5VTE6 544 aaKnown RBP7.97□□□□□ -1.13
TPM4-203ENST00000586193 FRMD7Q6ZUT3 714 aa7.97□□□□□ -1.13
TPM4-203ENST00000586193 ZNF354CQ86Y25 554 aa7.97□□□□□ -1.13
TPM4-203ENST00000586193 ACRBPQ8NEB7 543 aa7.97□□□□□ -1.13
TPM4-203ENST00000586193 PPP1R35Q8TAP8 253 aa7.97□□□□□ -1.13
TPM4-203ENST00000586193 DIS3LQ8TF46 1054 aaKnown RBP7.97□□□□□ -1.13
TPM4-203ENST00000586193 SCLT1Q96NL6 688 aa7.97□□□□□ -1.13
TPM4-203ENST00000586193 FAM193BQ96PV7 902 aaPredicted RBP7.97□□□□□ -1.13
TPM4-203ENST00000586193 CDIP1Q9H305 208 aa7.97□□□□□ -1.13
TPM4-203ENST00000586193 FAM204AQ9H8W3 233 aa7.97□□□□□ -1.13
TPM4-203ENST00000586193 SP110Q9HB58 689 aa7.97□□□□□ -1.13
TPM4-203ENST00000586193 PRDM5Q9NQX1 630 aaPredicted RBP7.97□□□□□ -1.13
TPM4-203ENST00000586193 NXF1Q9UBU9 619 aaKnown RBP7.97□□□□□ -1.13
TPM4-203ENST00000586193 LAS1LQ9Y4W2 734 aaKnown RBP7.97□□□□□ -1.13
TPM4-203ENST00000586193 IPPQ9Y573 584 aa7.97□□□□□ -1.13
TPM4-203ENST00000586193 PCDHGB6Q9Y5F9 930 aa7.97□□□□□ -1.13
TPM4-203ENST00000586193 PEG3Q9GZU2 1588 aa7.97□□□□□ -1.13
TPM4-203ENST00000586193 F8W735 103 aaPredicted RBP7.96□□□□□ -1.14
TPM4-203ENST00000586193 ZKSCAN1P17029 563 aaPredicted RBP7.96□□□□□ -1.14
TPM4-203ENST00000586193 PTX3P26022 381 aaPredicted RBP7.96□□□□□ -1.14
TPM4-203ENST00000586193 KIR3DL1P43629 444 aa7.96□□□□□ -1.14
TPM4-203ENST00000586193 FXR1P51114 621 aaKnown RBP eCLIP7.96□□□□□ -1.14
TPM4-203ENST00000586193 KIF11P52732 1056 aa7.96□□□□□ -1.14
TPM4-203ENST00000586193 SRSF2Q01130 221 aaKnown RBP7.96□□□□□ -1.14
TPM4-203ENST00000586193 LAPTM4AQ15012 233 aa7.96□□□□□ -1.14
TPM4-203ENST00000586193 SEZ6L2Q6UXD5 910 aa7.96□□□□□ -1.14
TPM4-203ENST00000586193 OVCH2Q7RTZ1 564 aa7.96□□□□□ -1.14
TPM4-203ENST00000586193 POF1BQ8WVV4 589 aa7.96□□□□□ -1.14
TPM4-203ENST00000586193 SLC2A13Q96QE2 648 aa7.96□□□□□ -1.14
TPM4-203ENST00000586193 ORAI2Q96SN7 254 aa7.96□□□□□ -1.14
TPM4-203ENST00000586193 DUSP23Q9BVJ7 150 aa7.96□□□□□ -1.14
TPM4-203ENST00000586193 YIPF2Q9BWQ6 316 aa7.96□□□□□ -1.14
TPM4-203ENST00000586193 TMX4Q9H1E5 349 aaPredicted RBP7.96□□□□□ -1.14
TPM4-203ENST00000586193 ZMAT4Q9H898 229 aa7.96□□□□□ -1.14
TPM4-203ENST00000586193 CLDND1Q9NY35 253 aa7.96□□□□□ -1.14
TPM4-203ENST00000586193 MAP3K20Q9NYL2 800 aaKnown RBP7.96□□□□□ -1.14
TPM4-203ENST00000586193 TIMM13Q9Y5L4 95 aaPredicted RBP7.96□□□□□ -1.14
TPM4-203ENST00000586193 CUX2O14529 1486 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 TRBV23OR9-2A0A075B6M9 112 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 PRR33A8MZF0 331 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 ZNF205O95201 554 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 BCRP11274 1271 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 OSMP13725 252 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 TYRP1P17643 537 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 AGXTP21549 392 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 IREB2P48200 963 aaKnown RBP7.95□□□□□ -1.14
TPM4-203ENST00000586193 ADKP55263 362 aaKnown RBP7.95□□□□□ -1.14
TPM4-203ENST00000586193 KRT76Q01546 638 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 TNK2Q07912 1038 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 LAPTM5Q13571 262 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 KRT72Q14CN4 511 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 GPR19Q15760 415 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 ALFQ53S48 1182 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 SGO2Q562F6 1265 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 TOR2AQ5JU69 321 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 ARHGAP36Q6ZRI8 547 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 PTRH1Q86Y79 214 aaKnown RBP7.95□□□□□ -1.14
TPM4-203ENST00000586193 TEX2Q8IWB9 1127 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 EZH1Q92800 747 aaPredicted RBP7.95□□□□□ -1.14
TPM4-203ENST00000586193 MAP3K14Q99558 947 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 SMOC1Q9H4F8 434 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 C1GALT1Q9NS00 363 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 GPR45Q9Y5Y3 372 aa7.95□□□□□ -1.14
TPM4-203ENST00000586193 TCRBV5S4A2TA0A5A2 114 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 FAM229AH3BQW9 127 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 SYPP08247 313 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 COL6A2P12110 1019 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 SARSP49591 514 aaKnown RBP7.94□□□□□ -1.14
TPM4-203ENST00000586193 RPL11P62913 178 aaKnown RBP7.94□□□□□ -1.14
TPM4-203ENST00000586193 KIAA0753Q2KHM9 967 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 CCDC70Q6NSX1 233 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 HHIPL2Q6UWX4 724 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 TMEM130Q8N3G9 435 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 CAMKK1Q8N5S9 505 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 TRIM11Q96F44 468 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 CCDC138Q96M89 665 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 PTCHD1Q96NR3 888 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 ACAP3Q96P50 834 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 TBCBQ99426 244 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 APOL5Q9BWW9 433 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 AP5S1Q9NUS5 200 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 BTG4Q9NY30 223 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 GTF2A1LQ9UNN4 478 aa7.94□□□□□ -1.14
TPM4-203ENST00000586193 C7orf72A4D263 438 aa7.93□□□□□ -1.14
TPM4-203ENST00000586193 H3BM21 787 aa7.93□□□□□ -1.14
TPM4-203ENST00000586193 SCDO00767 359 aa7.93□□□□□ -1.14
TPM4-203ENST00000586193 FGF10O15520 208 aaPredicted RBP7.93□□□□□ -1.14
TPM4-203ENST00000586193 HIP1RO75146 1068 aa7.93□□□□□ -1.14
TPM4-203ENST00000586193 HRGP04196 525 aa7.93□□□□□ -1.14
TPM4-203ENST00000586193 GNAT1P11488 350 aa7.93□□□□□ -1.14
TPM4-203ENST00000586193 HOXB4P17483 251 aaPredicted RBP7.93□□□□□ -1.14
TPM4-203ENST00000586193 CD40P25942 277 aa7.93□□□□□ -1.14
TPM4-203ENST00000586193 KIF23Q02241 960 aaPredicted RBP7.93□□□□□ -1.14
TPM4-203ENST00000586193 MAPRE1Q15691 268 aaKnown RBP7.93□□□□□ -1.14
TPM4-203ENST00000586193 IFI16Q16666 785 aaKnown RBP7.93□□□□□ -1.14
TPM4-203ENST00000586193 CPZQ66K79 652 aa7.93□□□□□ -1.14
TPM4-203ENST00000586193 ESRP1Q6NXG1 681 aaKnown RBP7.93□□□□□ -1.14
TPM4-203ENST00000586193 NOSTRINQ8IVI9 506 aa7.93□□□□□ -1.14
TPM4-203ENST00000586193 USHBP1Q8N6Y0 703 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms