RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 POLR2DO15514 142 aaKnown RBP18.12■□□□□ 0.49
SS18-226ENST00000585241 ACTN4O43707 911 aaKnown RBP18.12■□□□□ 0.49
SS18-226ENST00000585241 KINO60870 393 aaKnown RBP18.12■□□□□ 0.49
SS18-226ENST00000585241 ATG7O95352 703 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 ZNF865P0CJ78 1059 aaPredicted RBP18.12■□□□□ 0.49
SS18-226ENST00000585241 SPATA31C1P0DKV0 1188 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 NAALADL2Q58DX5 795 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 CELF3Q5SZQ8 465 aaKnown RBP18.12■□□□□ 0.49
SS18-226ENST00000585241 IQSEC1Q6DN90 963 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 MIER3Q7Z3K6 550 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 IQUBQ8NA54 791 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 TRIB2Q92519 343 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 EMID1Q96A84 441 aaPredicted RBP18.12■□□□□ 0.49
SS18-226ENST00000585241 CALML4Q96GE6 196 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 NT5C3AQ9H0P0 336 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 CUEDC2Q9H467 287 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 CLSTN2Q9H4D0 955 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 BCAS3Q9H6U6 928 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 TMEM63CQ9P1W3 806 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 TCEAL9Q9UHQ7 104 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 NKRFO15226 690 aaKnown RBP eCLIP18.11■□□□□ 0.49
SS18-226ENST00000585241 CHMP2AO43633 222 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 MED24O75448 989 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 GGPS1O95749 300 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 SLFN14P0C7P3 912 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 TXNP10599 105 aaKnown RBP18.11■□□□□ 0.49
SS18-226ENST00000585241 PLCG1P19174 1290 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 CYP2C19P33261 490 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 CCT6AP40227 531 aaKnown RBP18.11■□□□□ 0.49
SS18-226ENST00000585241 ECM1Q16610 540 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 LY6KQ17RY6 165 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 CCDC183Q5T5S1 534 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 KRBA2Q6ZNG9 492 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 CYFIP1Q7L576 1253 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 CATSPER3Q86XQ3 398 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 LRRC15Q8TF66 581 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 SYAP1Q96A49 352 aaPredicted RBP18.11■□□□□ 0.49
SS18-226ENST00000585241 STK17AQ9UEE5 414 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 DOCK5Q9H7D0 1870 aa18.11■□□□□ 0.49
SS18-226ENST00000585241 SLITRK3O94933 977 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 ADCYAP1R1P41586 468 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 ACTR2P61160 394 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 ARHGAP1Q07960 439 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 LONRF3Q496Y0 759 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 DUSP28Q4G0W2 176 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 RRAGBQ5VZM2 374 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 MFSD14CQ5VZR4 134 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 CAVIN1Q6NZI2 390 aaKnown RBP18.1■□□□□ 0.49
SS18-226ENST00000585241 PDXDC2PQ6P474 469 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 ABHD15Q6UXT9 468 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 SH3RF1Q7Z6J0 888 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 PDILTQ8N807 584 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 PXYLP1Q8TE99 480 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 DHX58Q96C10 678 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 MAGEF1Q9HAY2 307 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 BLOC1S4Q9NUP1 217 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 SERTAD1Q9UHV2 236 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 ZHX1Q9UKY1 873 aaPredicted RBP18.1■□□□□ 0.49
SS18-226ENST00000585241 PCDHA10Q9Y5I2 948 aa18.1■□□□□ 0.49
SS18-226ENST00000585241 IGKV6D-21A0A0A0MT36 114 aa18.09■□□□□ 0.49
SS18-226ENST00000585241 POTEB3A0JP26 581 aa18.09■□□□□ 0.49
SS18-226ENST00000585241 LYPLA2O95372 231 aa18.09■□□□□ 0.49
SS18-226ENST00000585241 GH1P01241 217 aa18.09■□□□□ 0.49
SS18-226ENST00000585241 P4HBP07237 508 aaKnown RBP18.09■□□□□ 0.49
SS18-226ENST00000585241 CYBAP13498 195 aa18.09■□□□□ 0.49
SS18-226ENST00000585241 STAT6P42226 847 aa18.09■□□□□ 0.49
SS18-226ENST00000585241 CCDC144BQ3MJ40 725 aa18.09■□□□□ 0.49
SS18-226ENST00000585241 POTEBQ6S5H4 581 aa18.09■□□□□ 0.49
SS18-226ENST00000585241 RBM43Q6ZSC3 357 aaKnown RBP18.09■□□□□ 0.49
SS18-226ENST00000585241 DYDC2Q96IM9 177 aa18.09■□□□□ 0.49
SS18-226ENST00000585241 CDK5RAP3Q96JB5 506 aa18.09■□□□□ 0.49
SS18-226ENST00000585241 PANK2Q9BZ23 570 aa18.09■□□□□ 0.49
SS18-226ENST00000585241 NUP62CLQ9H1M0 184 aa18.09■□□□□ 0.49
SS18-226ENST00000585241 IGSF9BQ9UPX0 1349 aa18.08■□□□□ 0.49
SS18-226ENST00000585241 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.08■□□□□ 0.48
SS18-226ENST00000585241 CTAGE5O15320 804 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 PSAPP07602 524 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 SUPT20HL2P0C7V6 817 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 SMPD1P17405 629 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 LAMC2Q13753 1193 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 PRAMEF19Q5SWL8 479 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 TMEM63BQ5T3F8 832 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 KANK3Q6NY19 840 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 MIS18BP1Q6P0N0 1132 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 KCNK18Q7Z418 384 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 DHX37Q8IY37 1157 aaKnown RBP18.08■□□□□ 0.48
SS18-226ENST00000585241 CNNM3Q8NE01 707 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 RASSF8Q8NHQ8 419 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 RAD54LQ92698 747 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 COPS5Q92905 334 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 GPR20Q99678 358 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 LXNQ9BS40 222 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 MLXIPQ9HAP2 919 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 KBTBD4Q9NVX7 518 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 RGL1Q9NZL6 768 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 TSKSQ9UJT2 592 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 GNEQ9Y223 722 aaKnown RBP18.08■□□□□ 0.48
SS18-226ENST00000585241 TELO2Q9Y4R8 837 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 WDR81Q562E7 1941 aa18.08■□□□□ 0.48
SS18-226ENST00000585241 GSTTP1A0A1W2PQM5 241 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms