RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 IFT20Q8IY31 132 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 KCNMB3Q9NPA1 279 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 POTEB3A0JP26 581 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 FRMD3A2A2Y4 597 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 GRID2IPA4D2P6 1211 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 POTECB2RU33 542 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 GLI1P08151 1106 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 SHMT1P34896 483 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 CORO7P57737 925 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ADAM9Q13443 819 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 EDRF1Q3B7T1 1238 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 DNAJC21Q5F1R6 531 aaKnown RBP15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 FAM182BQ5T319 152 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 MEI1Q5TIA1 1274 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 POTEBQ6S5H4 581 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 PPP4R3CPQ6ZMV5 832 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 GANQ9H2C0 597 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 KANSL2Q9H9L4 492 aa15.62■□□□□ 0.09
CDK5RAP3-237ENST00000585163 NPHP3-ACAD11A0A0J9YXS1 232 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 HSF2BPO75031 334 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 MAGEA9P43362 315 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 KLHL30Q0D2K2 578 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 RAPGEF1Q13905 1077 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 KIAA0753Q2KHM9 967 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 KCTD1Q719H9 257 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 CAPS2Q9BXY5 557 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ADAMTS1Q9UHI8 967 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 SUGT1Q9Y2Z0 365 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 PITPNM2Q9BZ72 1349 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 C6orf229H3BNL8 230 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 FTCDO95954 541 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 USP11P51784 963 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 CACNB1Q02641 598 aaPredicted RBP15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 SF3B2Q13435 895 aaKnown RBP15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 FAM133AQ8N9E0 248 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 NGLY1Q96IV0 654 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 C8orf37Q96NL8 207 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 INPP4AQ96PE3 977 aaPredicted RBP15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 GLT8D2Q9H1C3 349 aa15.61■□□□□ 0.09
CDK5RAP3-237ENST00000585163 CYP3A7-CYP3A51PA0A087WV96 503 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 USP17L15C9J2P7 530 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 USP17L13C9JLJ4 530 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 USP17L11C9JVI0 530 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 USP17L18D6R9N7 530 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 USP17L22D6RA61 530 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 USP17L17D6RBQ6 530 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 USP17L19D6RCP7 530 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 USP17L20D6RJB6 530 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 CLSTN1O94985 981 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ADRA2BP18089 450 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 CYP3A7P24462 503 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 HOXA10P31260 410 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 SLC12A3P55017 1021 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 USP17L24Q0WX57 530 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 KCNH2Q12809 1159 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ARSHQ5FYA8 562 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 USP17L6PQ6QN14 398 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 RUFY1Q96T51 708 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.6■□□□□ 0.091e-6■□□□□ 8
CDK5RAP3-237ENST00000585163 GREB1LQ9C091 1923 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 CETN3O15182 167 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 HEXIM1O94992 359 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 SERPINB2P05120 415 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 CARSP49589 748 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 IRX3P78415 501 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ARID5AQ03989 594 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ASIC2Q16515 512 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 TTMPQ5BVD1 217 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ARL8AQ96BM9 186 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 MBOAT7Q96N66 472 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ZIM3Q96PE6 472 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 PACSIN1Q9BY11 444 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 EPB41L5Q9HCM4 733 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 LTBP1Q14766 1721 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 MYH4Q9Y623 1939 aa15.6■□□□□ 0.09
CDK5RAP3-237ENST00000585163 BTNL10A8MVZ5 291 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 MED24O75448 989 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 EPS15P42566 896 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 PAK2Q13177 524 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 IQCKQ8N0W5 287 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 UIMC1Q96RL1 719 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 NFU1Q9UMS0 254 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 GRIN2DO15399 1336 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 ZSCAN5CA6NGD5 496 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 F8W031 263 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 EIF3HO15372 352 aaKnown RBP eCLIP15.59■□□□□ 0.092e-7■■□□□ 11.6
CDK5RAP3-237ENST00000585163 NR2F2P24468 414 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 SKOR1P84550 965 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 GUCY2DQ02846 1103 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 C10orf76Q5T2E6 689 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 DPY19L2P1Q6NXN4 242 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 SLFN12Q8IYM2 578 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 MREGQ8N565 214 aa15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 DHX36Q9H2U1 1008 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-237ENST00000585163 KRT18P05783 430 aaKnown RBP15.58■□□□□ 0.09
CDK5RAP3-237ENST00000585163 GYS1P13807 737 aa15.58■□□□□ 0.09
CDK5RAP3-237ENST00000585163 DNA2P51530 1060 aa15.58■□□□□ 0.09
CDK5RAP3-237ENST00000585163 QRICH1Q2TAL8 776 aa15.58■□□□□ 0.09
CDK5RAP3-237ENST00000585163 MOXD1Q6UVY6 613 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms