RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 TAAR1Q96RJ0 339 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 CRBNQ96SW2 442 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 BAZ2BQ9UIF8 2168 aaKnown RBP9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 ABCB11O95342 1321 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 ATG2AQ2TAZ0 1938 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 B4DLN1 442 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 ACTN4O43707 911 aaKnown RBP9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 LPXNO60711 386 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 GH1P01241 217 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 PCP11498 1178 aaKnown RBP9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 EIF2AK2P19525 551 aaKnown RBP9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 MRPL12P52815 198 aaKnown RBP9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 RRP1P56182 461 aaKnown RBP9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 QPCTQ16769 361 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 TCTN1Q2MV58 587 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 QRICH1Q2TAL8 776 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 LRRC8DQ7L1W4 858 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 SESTD1Q86VW0 696 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 CCDC155Q8N6L0 562 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 PNMA1Q8ND90 353 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 CAGE1Q8TC20 777 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 SYTL5Q8TDW5 730 aaPredicted RBP9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 AFAP1L1Q8TED9 768 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 ESR2Q92731 530 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 RILPL2Q969X0 211 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 ALG1Q9BT22 464 aa9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 RNF41Q9H4P4 317 aaPredicted RBP9.1□□□□□ -0.95
SMCHD1-210ENST00000583800 NBNO60934 754 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 KDM4AO75164 1064 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 ZNF286BP0CG31 522 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 CD46P15529 392 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 SELPP16109 830 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 STXBP2Q15833 593 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 CNKSR3Q6P9H4 555 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 DGKHQ86XP1 1220 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 ADGRF4Q8IZF3 695 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 NSUN6Q8TEA1 469 aaKnown RBP9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 WNT8BQ93098 351 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 RMDN3Q96TC7 470 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 LNPKQ9C0E8 428 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 KAT14Q9H8E8 782 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 HDAC6Q9UBN7 1215 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 GTF2IRD1Q9UHL9 959 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 MTUS1Q9ULD2 1270 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 COG5Q9UP83 839 aa9.09□□□□□ -0.95
SMCHD1-210ENST00000583800 PALM3A6NDB9 673 aaPredicted RBP9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 B4E1Z4 1266 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 ZNF213O14771 459 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 DHX16O60231 1041 aaKnown RBP9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 SORBS3O60504 671 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 ATG7O95352 703 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 ADH1BP00325 375 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 CXCL10P02778 98 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 HMGB1P09429 215 aaKnown RBP9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 CKBP12277 381 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 SDSP20132 328 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 CASTP20810 708 aaKnown RBP9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 PLA2G5P39877 138 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 RBL2Q08999 1139 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 HDAC1Q13547 482 aaPredicted RBP9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 DGKDQ16760 1214 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 KMT5BQ4FZB7 885 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 ASPRV1Q53RT3 343 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 PLA2G2CQ5R387 149 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 ARHGEF16Q5VV41 709 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 FAM117BQ6P1L5 589 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 IQCA1Q86XH1 822 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 MCF2L2Q86YR7 1114 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 C7orf31Q8N865 590 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 HLA-CQ95604 372 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 C1QTNF1Q9BXJ1 281 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 ALG2Q9H553 416 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 EPHX3Q9H6B9 360 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 VAT1LQ9HCJ6 419 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 PXMP2Q9NR77 195 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 IGSF5Q9NSI5 407 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 DDX41Q9UJV9 622 aaKnown RBP9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 MRVI1Q9Y6F6 885 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 KAT6AQ92794 2004 aa9.08□□□□□ -0.96
SMCHD1-210ENST00000583800 RALGAPA2Q2PPJ7 1873 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 HAS3O00219 553 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 OPLAHO14841 1288 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 GJB5O95377 273 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 F2P00734 622 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 CFBP00751 764 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 NR3C2P08235 984 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 PARP1P09874 1014 aaKnown RBP9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 ZNF200P98182 395 aaPredicted RBP9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 MBTPS1Q14703 1052 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 CSPP1Q1MSJ5 1256 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 KIAA0753Q2KHM9 967 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 TRIM71Q2Q1W2 868 aaKnown RBP9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 ZNF618Q5T7W0 954 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 CWC27Q6UX04 472 aaKnown RBP9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 FBXO11Q86XK2 927 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 TICAM2Q86XR7 235 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 ENAHQ8N8S7 591 aaPredicted RBP9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 PPTC7Q8NI37 304 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 FAM122AQ96E09 287 aa9.07□□□□□ -0.96
SMCHD1-210ENST00000583800 IWS1Q96ST2 819 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms