RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 IER5LQ5T953 404 aa14.25□□□□□ -0.13
TOP3A-215ENST00000583328 TRIM67Q6ZTA4 783 aa14.25□□□□□ -0.13
TOP3A-215ENST00000583328 SUGP1Q8IWZ8 645 aaKnown RBP14.25□□□□□ -0.13
TOP3A-215ENST00000583328 CLP1Q92989 425 aaKnown RBP14.25□□□□□ -0.13
TOP3A-215ENST00000583328 PRRX2Q99811 253 aa14.25□□□□□ -0.13
TOP3A-215ENST00000583328 UBAC1Q9BSL1 405 aa14.25□□□□□ -0.13
TOP3A-215ENST00000583328 ALG13Q9NP73 1137 aaKnown RBP14.25□□□□□ -0.13
TOP3A-215ENST00000583328 ZNF215Q9UL58 517 aaPredicted RBP14.25□□□□□ -0.13
TOP3A-215ENST00000583328 KIAA1217Q5T5P2 1943 aa14.24□□□□□ -0.13
TOP3A-215ENST00000583328 CHRNA1P02708 482 aa14.24□□□□□ -0.13
TOP3A-215ENST00000583328 MMP1P03956 469 aa14.24□□□□□ -0.13
TOP3A-215ENST00000583328 SDSP20132 328 aa14.24□□□□□ -0.13
TOP3A-215ENST00000583328 TRAF1Q13077 416 aa14.24□□□□□ -0.13
TOP3A-215ENST00000583328 IFIT1BQ5T764 474 aaKnown RBP14.24□□□□□ -0.13
TOP3A-215ENST00000583328 METTL7BQ6UX53 244 aa14.24□□□□□ -0.13
TOP3A-215ENST00000583328 TRIM50Q86XT4 487 aa14.24□□□□□ -0.13
TOP3A-215ENST00000583328 HOMER1Q86YM7 354 aa14.24□□□□□ -0.13
TOP3A-215ENST00000583328 MTMR8Q96EF0 704 aa14.24□□□□□ -0.13
TOP3A-215ENST00000583328 GPR20Q99678 358 aa14.24□□□□□ -0.13
TOP3A-215ENST00000583328 PLVAPQ9BX97 442 aa14.24□□□□□ -0.13
TOP3A-215ENST00000583328 RTEL1Q9NZ71 1219 aa14.24□□□□□ -0.13
TOP3A-215ENST00000583328 PLAGL2Q9UPG8 496 aa14.24□□□□□ -0.13
TOP3A-215ENST00000583328 NRCAMQ92823 1304 aa14.23□□□□□ -0.13
TOP3A-215ENST00000583328 ST18O60284 1047 aa14.23□□□□□ -0.13
TOP3A-215ENST00000583328 ICAM3P32942 547 aa14.23□□□□□ -0.13
TOP3A-215ENST00000583328 ADAM17P78536 824 aa14.23□□□□□ -0.13
TOP3A-215ENST00000583328 ZXDAP98168 799 aa14.23□□□□□ -0.13
TOP3A-215ENST00000583328 SP4Q02446 784 aa14.23□□□□□ -0.13
TOP3A-215ENST00000583328 RSPH3Q86UC2 560 aa14.23□□□□□ -0.13
TOP3A-215ENST00000583328 EXOC6Q8TAG9 804 aa14.23□□□□□ -0.13
TOP3A-215ENST00000583328 LMBR1Q8WVP7 490 aa14.23□□□□□ -0.13
TOP3A-215ENST00000583328 ZNF689Q96CS4 500 aaPredicted RBP14.23□□□□□ -0.13
TOP3A-215ENST00000583328 KRT23Q9C075 422 aa14.23□□□□□ -0.13
TOP3A-215ENST00000583328 MAD2L2Q9UI95 211 aa14.23□□□□□ -0.13
TOP3A-215ENST00000583328 ZNF318Q5VUA4 2279 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 MYH7BA7E2Y1 1941 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 SPATA31C2B4DYI2 1134 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 FIBPO43427 364 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 STAM2O75886 525 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 EYA4O95677 639 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 IRX6P78412 446 aaPredicted RBP14.22□□□□□ -0.13
TOP3A-215ENST00000583328 CAMK1Q14012 370 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 LPIN1Q14693 890 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 IMMTQ16891 758 aaKnown RBP14.22□□□□□ -0.13
TOP3A-215ENST00000583328 TAF2Q6P1X5 1199 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 RUFY4Q6ZNE9 571 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 MSLNLQ96KJ4 702 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 INPP4AQ96PE3 977 aaPredicted RBP14.22□□□□□ -0.13
TOP3A-215ENST00000583328 PIGSQ96S52 555 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 EHMT1Q9H9B1 1298 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 RC3H2Q9HBD1 1191 aaKnown RBP14.22□□□□□ -0.13
TOP3A-215ENST00000583328 COL4A6Q14031 1691 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 TECTAO75443 2155 aa14.22□□□□□ -0.13
TOP3A-215ENST00000583328 PALM3A6NDB9 673 aaPredicted RBP14.21□□□□□ -0.13
TOP3A-215ENST00000583328 LOC730098B7Z3J9 87 aa14.21□□□□□ -0.13
TOP3A-215ENST00000583328 DGKIO75912 1065 aa14.21□□□□□ -0.13
TOP3A-215ENST00000583328 MRPS9P82933 396 aaKnown RBP14.21□□□□□ -0.13
TOP3A-215ENST00000583328 MGAT3Q09327 533 aa14.21□□□□□ -0.13
TOP3A-215ENST00000583328 TCF15Q12870 199 aa14.21□□□□□ -0.13
TOP3A-215ENST00000583328 SEMA3FQ13275 785 aa14.21□□□□□ -0.13
TOP3A-215ENST00000583328 NAALADL2Q58DX5 795 aa14.21□□□□□ -0.13
TOP3A-215ENST00000583328 CWC27Q6UX04 472 aaKnown RBP14.21□□□□□ -0.13
TOP3A-215ENST00000583328 RBM23Q86U06 439 aaKnown RBP14.21□□□□□ -0.13
TOP3A-215ENST00000583328 EFHBQ8N7U6 833 aa14.21□□□□□ -0.13
TOP3A-215ENST00000583328 SPPL3Q8TCT6 385 aa14.21□□□□□ -0.13
TOP3A-215ENST00000583328 P2RX5Q93086 422 aa14.21□□□□□ -0.13
TOP3A-215ENST00000583328 CNNM2Q9H8M5 875 aa14.21□□□□□ -0.13
TOP3A-215ENST00000583328 TELO2Q9Y4R8 837 aa14.21□□□□□ -0.13
TOP3A-215ENST00000583328 MRPL42Q9Y6G3 142 aaKnown RBP14.21□□□□□ -0.13
TOP3A-215ENST00000583328 ITGB1P05556 798 aa14.2□□□□□ -0.14
TOP3A-215ENST00000583328 DNAJB1P25685 340 aa14.2□□□□□ -0.14
TOP3A-215ENST00000583328 NRIP1P48552 1158 aa14.2□□□□□ -0.14
TOP3A-215ENST00000583328 PPFIA1Q13136 1202 aa14.2□□□□□ -0.14
TOP3A-215ENST00000583328 FBXO47Q5MNV8 452 aa14.2□□□□□ -0.14
TOP3A-215ENST00000583328 ADGRD2Q7Z7M1 963 aa14.2□□□□□ -0.14
TOP3A-215ENST00000583328 FBXL6Q8N531 539 aa14.2□□□□□ -0.14
TOP3A-215ENST00000583328 SMRP1Q8NCR6 262 aa14.2□□□□□ -0.14
TOP3A-215ENST00000583328 POF1BQ8WVV4 589 aa14.2□□□□□ -0.14
TOP3A-215ENST00000583328 DNAJB3Q8WWF6 145 aa14.2□□□□□ -0.14
TOP3A-215ENST00000583328 DIAPH3Q9NSV4 1193 aa14.2□□□□□ -0.14
TOP3A-215ENST00000583328 CLEC1BQ9P126 229 aa14.2□□□□□ -0.14
TOP3A-215ENST00000583328 CDY2AQ9Y6F7 541 aa14.2□□□□□ -0.14
TOP3A-215ENST00000583328 PNMA6FA0A0J9YX94 578 aa14.19□□□□□ -0.14
TOP3A-215ENST00000583328 COASYQ13057 564 aa14.19□□□□□ -0.14
TOP3A-215ENST00000583328 CBX2Q14781 532 aaPredicted RBP14.19□□□□□ -0.14
TOP3A-215ENST00000583328 SEC23AQ15436 765 aa14.19□□□□□ -0.14
TOP3A-215ENST00000583328 PAN2Q504Q3 1202 aaKnown RBP14.19□□□□□ -0.14
TOP3A-215ENST00000583328 TSHZ1Q6ZSZ6 1077 aa14.19□□□□□ -0.14
TOP3A-215ENST00000583328 NLRX1Q86UT6 975 aa14.19□□□□□ -0.14
TOP3A-215ENST00000583328 CMTR2Q8IYT2 770 aaKnown RBP14.19□□□□□ -0.14
TOP3A-215ENST00000583328 KLHL23Q8NBE8 558 aa14.19□□□□□ -0.14
TOP3A-215ENST00000583328 RPGRIP1Q96KN7 1286 aa14.19□□□□□ -0.14
TOP3A-215ENST00000583328 SENP7Q9BQF6 1050 aa14.19□□□□□ -0.14
TOP3A-215ENST00000583328 DSCC1Q9BVC3 393 aa14.19□□□□□ -0.14
TOP3A-215ENST00000583328 PHF7Q9BWX1 381 aaPredicted RBP14.19□□□□□ -0.14
TOP3A-215ENST00000583328 LNPKQ9C0E8 428 aa14.19□□□□□ -0.14
TOP3A-215ENST00000583328 RIOX1Q9H6W3 641 aa14.19□□□□□ -0.14
TOP3A-215ENST00000583328 FAM86C1Q9NVL1 165 aa14.19□□□□□ -0.14
TOP3A-215ENST00000583328 BARX2Q9UMQ3 279 aaPredicted RBP14.19□□□□□ -0.14
TOP3A-215ENST00000583328 USP15Q9Y4E8 981 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms