RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 UBE2TQ9NPD8 197 aaPredicted RBP17.72■□□□□ 0.43
ERBB2-214ENST00000583038 ANAPC5Q9UJX4 755 aa17.72■□□□□ 0.43
ERBB2-214ENST00000583038 PCDHA13Q9Y5I0 950 aa17.72■□□□□ 0.43
ERBB2-214ENST00000583038 POC1B-GALNT4F8VUJ3 575 aa17.72■□□□□ 0.43
ERBB2-214ENST00000583038 CDC25AP30304 524 aa17.72■□□□□ 0.43
ERBB2-214ENST00000583038 MYO1EQ12965 1108 aa17.72■□□□□ 0.43
ERBB2-214ENST00000583038 RSRC2Q7L4I2 434 aaKnown RBP17.72■□□□□ 0.43
ERBB2-214ENST00000583038 PFKFB3Q16875 520 aaPredicted RBP17.71■□□□□ 0.43
ERBB2-214ENST00000583038 ACRBPQ8NEB7 543 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 NEK9Q8TD19 979 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 PGBD1Q96JS3 809 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 CUL1Q13616 776 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 GPR162Q16538 588 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 SESTD1Q86VW0 696 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 HVCN1Q96D96 273 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 LCMT1Q9UIC8 334 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 MID2Q9UJV3 735 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 SCINQ9Y6U3 715 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 SPATA31A3Q5VYP0 1347 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 CYP27B1O15528 508 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 TFAMQ00059 246 aaKnown RBP17.71■□□□□ 0.43
ERBB2-214ENST00000583038 ZNF710Q8N1W2 664 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 BPIFA3Q9BQP9 254 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 MYO3BQ8WXR4 1341 aa17.71■□□□□ 0.43
ERBB2-214ENST00000583038 TET3O43151 1660 aa17.71■□□□□ 0.42
ERBB2-214ENST00000583038 TYW5A2RUC4 315 aaKnown RBP17.71■□□□□ 0.42
ERBB2-214ENST00000583038 JAK3P52333 1124 aa17.71■□□□□ 0.42
ERBB2-214ENST00000583038 PPARDQ03181 441 aa17.71■□□□□ 0.42
ERBB2-214ENST00000583038 GLE1Q53GS7 698 aaKnown RBP17.71■□□□□ 0.42
ERBB2-214ENST00000583038 AIFM3Q96NN9 605 aa17.71■□□□□ 0.42
ERBB2-214ENST00000583038 ALDH8A1Q9H2A2 487 aaPredicted RBP17.71■□□□□ 0.42
ERBB2-214ENST00000583038 KIAA1586Q9HCI6 787 aa17.71■□□□□ 0.42
ERBB2-214ENST00000583038 MIF4GDA9UHW6 222 aaKnown RBP17.7■□□□□ 0.42
ERBB2-214ENST00000583038 KRT1P04264 644 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
ERBB2-214ENST00000583038 DHX9Q08211 1270 aaKnown RBP17.7■□□□□ 0.42
ERBB2-214ENST00000583038 KRT27Q7Z3Y8 459 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 EXOC4Q96A65 974 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 GBP5Q96PP8 586 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 BAG5Q9UL15 447 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 PTPN22Q9Y2R2 807 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 SOWAHDA6NJG2 315 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 ABL1P00519 1130 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 ECE1P42892 770 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 TOB2Q14106 344 aaPredicted RBP17.7■□□□□ 0.42
ERBB2-214ENST00000583038 ABI1Q8IZP0 508 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 FAM20AQ96MK3 541 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 TUBB6Q9BUF5 446 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 BHMT2Q9H2M3 363 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 ATP8A1Q9Y2Q0 1164 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 CYP2D7A0A087X1C5 515 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 MEIS1O00470 390 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 ADRA2BP18089 450 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 MSH2P43246 934 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 PDXDC2PQ6P474 469 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 MCPH1Q8NEM0 835 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 MASTLQ96GX5 879 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 SLC12A6Q9UHW9 1150 aa17.7■□□□□ 0.42
ERBB2-214ENST00000583038 SORBS3O60504 671 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 CPP00450 1065 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 SF3A3Q12874 501 aaKnown RBP eCLIP17.69■□□□□ 0.422e-6■■■□□ 16.6
ERBB2-214ENST00000583038 KCTD16Q68DU8 428 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 NARFQ9UHQ1 456 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 ADCY10Q96PN6 1610 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 KDM6BO15054 1643 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 ZBTB5O15062 677 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 SATB1Q01826 763 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 BZW1Q7L1Q6 419 aaKnown RBP17.69■□□□□ 0.42
ERBB2-214ENST00000583038 ARMCX2Q7L311 632 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 SLC38A10Q9HBR0 1119 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 ABCC3O15438 1527 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 ARAP3Q8WWN8 1544 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 ANO9A1A5B4 782 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 SPDYE16A6NNV3 312 aaPredicted RBP17.69■□□□□ 0.42
ERBB2-214ENST00000583038 K7ERI5 159 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 LUC7L3O95232 432 aaKnown RBP17.69■□□□□ 0.42
ERBB2-214ENST00000583038 CCT5P48643 541 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 SPDYE2Q495Y8 402 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 PCIF1Q9H4Z3 704 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 CDC42BPGQ6DT37 1551 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 LGALS16A8MUM7 142 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 IPO5O00410 1097 aaKnown RBP17.69■□□□□ 0.42
ERBB2-214ENST00000583038 WDR46O15213 610 aaKnown RBP17.69■□□□□ 0.42
ERBB2-214ENST00000583038 MAP2K2P36507 400 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 RC3H1Q5TC82 1133 aaKnown RBP17.69■□□□□ 0.42
ERBB2-214ENST00000583038 CIAPIN1Q6FI81 312 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 LRRC4Q9HBW1 653 aa17.69■□□□□ 0.42
ERBB2-214ENST00000583038 GOLGA8SH3BPF8 625 aa17.68■□□□□ 0.42
ERBB2-214ENST00000583038 COBLO75128 1261 aa17.68■□□□□ 0.42
ERBB2-214ENST00000583038 PLEKHA8P1O95397 391 aa17.68■□□□□ 0.42
ERBB2-214ENST00000583038 RAB44Q7Z6P3 723 aaPredicted RBP17.68■□□□□ 0.42
ERBB2-214ENST00000583038 FBXO40Q9UH90 709 aa17.68■□□□□ 0.42
ERBB2-214ENST00000583038 MAP3K4Q9Y6R4 1608 aa17.68■□□□□ 0.42
ERBB2-214ENST00000583038 MOCS3O95396 460 aa17.68■□□□□ 0.42
ERBB2-214ENST00000583038 FTCDO95954 541 aa17.68■□□□□ 0.42
ERBB2-214ENST00000583038 TRIM28Q13263 835 aaKnown RBP17.68■□□□□ 0.42
ERBB2-214ENST00000583038 UBE2SQ16763 222 aa17.68■□□□□ 0.42
ERBB2-214ENST00000583038 MTERF2Q49AM1 385 aa17.68■□□□□ 0.42
ERBB2-214ENST00000583038 PODNQ7Z5L7 613 aa17.68■□□□□ 0.42
ERBB2-214ENST00000583038 FMO2Q99518 471 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms