RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 HSDL1Q3SXM5 330 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 TPRNQ4KMQ1 711 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 RESP18Q5W5W9 173 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 NCAPH2Q6IBW4 605 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 FBXO46Q6PJ61 603 aaPredicted RBP10.73□□□□□ -0.69
RFFL-210ENST00000582308 SYMPKQ92797 1274 aaKnown RBP10.73□□□□□ -0.69
RFFL-210ENST00000582308 EMID1Q96A84 441 aaPredicted RBP10.73□□□□□ -0.69
RFFL-210ENST00000582308 AK8Q96MA6 479 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 MLXIPQ9HAP2 919 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 PRDM10Q9NQV6 1147 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 LRWD1Q9UFC0 647 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 KIAA0100Q14667 2235 aaKnown RBP10.73□□□□□ -0.69
RFFL-210ENST00000582308 LOXHD1Q8IVV2 1947 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 TRIP12Q14669 1992 aaPredicted RBP10.72□□□□□ -0.69
RFFL-210ENST00000582308 A0A1W2PQ27 194 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 A0A1W2PQ64 194 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 A0A1W2PQD8 194 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 WDR64B1ANS9 1081 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 DYNC1LI2O43237 492 aaPredicted RBP10.72□□□□□ -0.69
RFFL-210ENST00000582308 ATG7O95352 703 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 SPATA31C1P0DKV0 1188 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 EPHA7Q15375 998 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 PKN2Q16513 984 aaKnown RBP10.72□□□□□ -0.69
RFFL-210ENST00000582308 SLC9C1Q4G0N8 1177 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 ABHD15Q6UXT9 468 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 MIER3Q7Z3K6 550 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 RDM1Q8NG50 284 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 OR6J1Q8NGC5 347 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 AFG1LQ8WV93 481 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 SPATA33Q96N06 139 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 GPR20Q99678 358 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 EIF2AK1Q9BQI3 630 aaKnown RBP10.72□□□□□ -0.69
RFFL-210ENST00000582308 RAB34Q9BZG1 259 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 CCSER1Q9C0I3 900 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 HMX1Q9NP08 348 aaPredicted RBP10.72□□□□□ -0.69
RFFL-210ENST00000582308 DISC1Q9NRI5 854 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 RGL1Q9NZL6 768 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 Q9Y3F1 56 aa10.72□□□□□ -0.69
RFFL-210ENST00000582308 A0A087X0B3 334 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 FAM237AA0A1B0GTK4 181 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 A0A1B0GVL5 298 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 GOLGA6L4A6NEF3 574 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 GOLGA6L22H0YM25 854 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 CTAGE5O15320 804 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 MED24O75448 989 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 SUPT20HL2P0C7V6 817 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 SFNP31947 248 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 UBA7P41226 1012 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 JAK3P52333 1124 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 UBE2HP62256 183 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 MTFR1Q15390 333 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 ECM1Q16610 540 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 ARID2Q68CP9 1835 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 TLK2Q86UE8 772 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 CABP7Q86V35 215 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 SMAP1Q8IYB5 467 aaPredicted RBP10.71□□□□□ -0.69
RFFL-210ENST00000582308 FSIP1Q8NA03 581 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 PPTC7Q8NI37 304 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 SNX29Q8TEQ0 813 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 SEPT1Q8WYJ6 367 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 EVPLQ92817 2033 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 DYDC2Q96IM9 177 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 PCYT2Q99447 389 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 HSD17B14Q9BPX1 270 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 PANK2Q9BZ23 570 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 AP5M1Q9H0R1 490 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 UNC93B1Q9H1C4 597 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 UPF3AQ9H1J1 476 aaKnown RBP10.71□□□□□ -0.69
RFFL-210ENST00000582308 GOLPH3LQ9H4A5 285 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 DDX20Q9UHI6 824 aaKnown RBP10.71□□□□□ -0.69
RFFL-210ENST00000582308 TCEAL9Q9UHQ7 104 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 SAMM50Q9Y512 469 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 PCDHA10Q9Y5I2 948 aa10.71□□□□□ -0.69
RFFL-210ENST00000582308 IGKV6D-21A0A0A0MT36 114 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 MYADML2A6NDP7 307 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 A6NJR5 290 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 NOP56O00567 594 aaKnown RBP10.7□□□□□ -0.7
RFFL-210ENST00000582308 LGR5O75473 907 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 SLITRK3O94933 977 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 PGK1P00558 417 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 PSAPP07602 524 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 MMP3P08254 477 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 RARBP10826 455 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 HOXD8P13378 290 aaPredicted RBP10.7□□□□□ -0.7
RFFL-210ENST00000582308 PFKFB1P16118 471 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 LIG1P18858 919 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 RPA1P27694 616 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 TCF7P36402 384 aaPredicted RBP10.7□□□□□ -0.7
RFFL-210ENST00000582308 CCT6AP40227 531 aaKnown RBP10.7□□□□□ -0.7
RFFL-210ENST00000582308 NDUFA8P51970 172 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 GJA9P57773 515 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 NKX3-2P78367 333 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 CYP4A11Q02928 519 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 GRB10Q13322 594 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 CTTNQ14247 550 aaKnown RBP10.7□□□□□ -0.7
RFFL-210ENST00000582308 KARSQ15046 597 aaKnown RBP10.7□□□□□ -0.7
RFFL-210ENST00000582308 UGCGQ16739 394 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 HYIQ5T013 277 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 KRT79Q5XKE5 535 aa10.7□□□□□ -0.7
RFFL-210ENST00000582308 LHX8Q68G74 356 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms