RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 CABP5Q9NP86 173 aa6.34□□□□□ -1.4
NF1-220ENST00000581113 NGRNQ9NPE2 291 aaKnown RBP6.34□□□□□ -1.4
NF1-220ENST00000581113 RIC8BQ9NVN3 520 aa6.34□□□□□ -1.4
NF1-220ENST00000581113 CCDC180Q9P1Z9 1646 aa6.33□□□□□ -1.4
NF1-220ENST00000581113 SCDO00767 359 aa6.33□□□□□ -1.4
NF1-220ENST00000581113 KRT37O76014 449 aa6.33□□□□□ -1.4
NF1-220ENST00000581113 LRG1P02750 347 aa6.33□□□□□ -1.4
NF1-220ENST00000581113 ZNF385BQ569K4 471 aa6.33□□□□□ -1.4
NF1-220ENST00000581113 EGFLAMQ63HQ2 1017 aa6.33□□□□□ -1.4
NF1-220ENST00000581113 CPZQ66K79 652 aa6.33□□□□□ -1.4
NF1-220ENST00000581113 HHIPL2Q6UWX4 724 aa6.33□□□□□ -1.4
NF1-220ENST00000581113 FAM129CQ86XR2 697 aa6.33□□□□□ -1.4
NF1-220ENST00000581113 DDX1Q92499 740 aaKnown RBP6.33□□□□□ -1.4
NF1-220ENST00000581113 PWWP2AQ96N64 755 aa6.33□□□□□ -1.4
NF1-220ENST00000581113 EPB41L4AQ9HCS5 686 aaPredicted RBP6.33□□□□□ -1.4
NF1-220ENST00000581113 SLC12A8A0AV02 714 aa6.32□□□□□ -1.4
NF1-220ENST00000581113 FAM90A27PA6NNH2 459 aa6.32□□□□□ -1.4
NF1-220ENST00000581113 NUAK1O60285 661 aa6.32□□□□□ -1.4
NF1-220ENST00000581113 PDE8AO60658 829 aa6.32□□□□□ -1.4
NF1-220ENST00000581113 FAHP16930 419 aa6.32□□□□□ -1.4
NF1-220ENST00000581113 FSTL4Q6MZW2 842 aa6.32□□□□□ -1.4
NF1-220ENST00000581113 STK32CQ86UX6 486 aa6.32□□□□□ -1.4
NF1-220ENST00000581113 PPM1KQ8N3J5 372 aa6.32□□□□□ -1.4
NF1-220ENST00000581113 CHST14Q8NCH0 376 aa6.32□□□□□ -1.4
NF1-220ENST00000581113 RBPJLQ9UBG7 517 aa6.32□□□□□ -1.4
NF1-220ENST00000581113 PMF1-BGLAPU3KQ54 211 aa6.32□□□□□ -1.4
NF1-220ENST00000581113 PTPDC1A2A3K4 754 aa6.31□□□□□ -1.4
NF1-220ENST00000581113 FAM83GA6ND36 823 aa6.31□□□□□ -1.4
NF1-220ENST00000581113 TRAF5O00463 557 aa6.31□□□□□ -1.4
NF1-220ENST00000581113 CLASP2O75122 1294 aaKnown RBP6.31□□□□□ -1.4
NF1-220ENST00000581113 GJA4P35212 333 aa6.31□□□□□ -1.4
NF1-220ENST00000581113 SMAD4Q13485 552 aaKnown RBP6.31□□□□□ -1.4
NF1-220ENST00000581113 PKN3Q6P5Z2 889 aa6.31□□□□□ -1.4
NF1-220ENST00000581113 NOSTRINQ8IVI9 506 aa6.31□□□□□ -1.4
NF1-220ENST00000581113 NOX5Q96PH1 765 aa6.31□□□□□ -1.4
NF1-220ENST00000581113 GORASP1Q9BQQ3 440 aa6.31□□□□□ -1.4
NF1-220ENST00000581113 IRF2BPLQ9H1B7 796 aa6.31□□□□□ -1.4
NF1-220ENST00000581113 A0A087X0B3 334 aa6.3□□□□□ -1.4
NF1-220ENST00000581113 PRAMEF25A6NGN4 478 aa6.3□□□□□ -1.4
NF1-220ENST00000581113 ACOT7O00154 380 aa6.3□□□□□ -1.4
NF1-220ENST00000581113 CBX4O00257 560 aa6.3□□□□□ -1.4
NF1-220ENST00000581113 HIP1RO75146 1068 aa6.3□□□□□ -1.4
NF1-220ENST00000581113 PLA2G1BP04054 148 aaKnown RBP6.3□□□□□ -1.4
NF1-220ENST00000581113 MECP2P51608 486 aaKnown RBP6.3□□□□□ -1.4
NF1-220ENST00000581113 IRF9Q00978 393 aa6.3□□□□□ -1.4
NF1-220ENST00000581113 PCBP1Q15365 356 aaKnown RBP eCLIP6.3□□□□□ -1.4
NF1-220ENST00000581113 CIAPIN1Q6FI81 312 aa6.3□□□□□ -1.4
NF1-220ENST00000581113 TMC5Q6UXY8 1006 aa6.3□□□□□ -1.4
NF1-220ENST00000581113 ZBTB8AQ96BR9 441 aa6.3□□□□□ -1.4
NF1-220ENST00000581113 BOCQ9BWV1 1114 aa6.3□□□□□ -1.4
NF1-220ENST00000581113 PDGFDQ9GZP0 370 aaPredicted RBP6.3□□□□□ -1.4
NF1-220ENST00000581113 PCDH18Q9HCL0 1135 aa6.3□□□□□ -1.4
NF1-220ENST00000581113 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.29□□□□□ -1.4
NF1-220ENST00000581113 POU3F2P20265 443 aaPredicted RBP6.29□□□□□ -1.4
NF1-220ENST00000581113 ITGA1P56199 1179 aa6.29□□□□□ -1.4
NF1-220ENST00000581113 SEC23AQ15436 765 aa6.29□□□□□ -1.4
NF1-220ENST00000581113 ARHGAP44Q17R89 818 aa6.29□□□□□ -1.4
NF1-220ENST00000581113 VASNQ6EMK4 673 aa6.29□□□□□ -1.4
NF1-220ENST00000581113 AHI1Q8N157 1196 aa6.29□□□□□ -1.4
NF1-220ENST00000581113 FNIP1Q8TF40 1166 aa6.29□□□□□ -1.4
NF1-220ENST00000581113 LEO1Q8WVC0 666 aaPredicted RBP6.29□□□□□ -1.4
NF1-220ENST00000581113 ZSWIM3Q96MP5 696 aa6.29□□□□□ -1.4
NF1-220ENST00000581113 TOX2Q96NM4 488 aa6.29□□□□□ -1.4
NF1-220ENST00000581113 C11orf84Q9BUA3 381 aaPredicted RBP6.29□□□□□ -1.4
NF1-220ENST00000581113 MTFR1LQ9H019 292 aa6.29□□□□□ -1.4
NF1-220ENST00000581113 ZKSCAN5Q9Y2L8 839 aa6.29□□□□□ -1.4
NF1-220ENST00000581113 CADPSQ9ULU8 1353 aa6.29□□□□□ -1.4
NF1-220ENST00000581113 GSG1L2A8MUP6 293 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 GAS7O60861 476 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 AFF3P51826 1226 aaKnown RBP6.28□□□□□ -1.4
NF1-220ENST00000581113 TMEM132BQ14DG7 1078 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 SKOR2Q2VWA4 1001 aaPredicted RBP6.28□□□□□ -1.4
NF1-220ENST00000581113 CD276Q5ZPR3 534 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 LIPIQ6XZB0 460 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 OTOP1Q7RTM1 612 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 NXPE1Q8N323 547 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 KCNH7Q9NS40 1196 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 HSPBP1Q9NZL4 362 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 B4GALT6Q9UBX8 382 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.28□□□□□ -1.4
NF1-220ENST00000581113 WASF3Q9UPY6 502 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 DBX1A6NMT0 343 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 ZNF891A8MT65 544 aaPredicted RBP6.28□□□□□ -1.4
NF1-220ENST00000581113 C4BPAP04003 597 aaKnown RBP6.28□□□□□ -1.4
NF1-220ENST00000581113 ZBTB48P10074 688 aaPredicted RBP6.28□□□□□ -1.4
NF1-220ENST00000581113 MASP1P48740 699 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 HTRA3P83110 453 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 DBPQ10586 325 aaPredicted RBP6.28□□□□□ -1.4
NF1-220ENST00000581113 SART3Q15020 963 aaKnown RBP6.28□□□□□ -1.4
NF1-220ENST00000581113 SEPT7Q16181 437 aaKnown RBP6.28□□□□□ -1.4
NF1-220ENST00000581113 PROSER1Q86XN7 944 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 THNSL2Q86YJ6 484 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 LRRC56Q8IYG6 542 aaPredicted RBP6.28□□□□□ -1.4
NF1-220ENST00000581113 UBR7Q8N806 425 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 LINC00482Q8N8I6 264 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 KYQ8NBH2 561 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 DACT3Q96B18 629 aaPredicted RBP6.28□□□□□ -1.4
NF1-220ENST00000581113 TMEM209Q96SK2 561 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
NF1-220ENST00000581113 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms