RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 TMEM87AQ8NBN3 555 aa17.51■□□□□ 0.39
SS18-216ENST00000580751 FOXD4L4Q8WXT5 416 aaPredicted RBP17.51■□□□□ 0.39
SS18-216ENST00000580751 SEPT1Q8WYJ6 367 aa17.51■□□□□ 0.39
SS18-216ENST00000580751 PAWRQ96IZ0 340 aaKnown RBP17.51■□□□□ 0.39
SS18-216ENST00000580751 MTG1Q9BT17 334 aaPredicted RBP17.51■□□□□ 0.39
SS18-216ENST00000580751 A0A1W2PQ45 241 aaPredicted RBP17.5■□□□□ 0.39
SS18-216ENST00000580751 A0A1W2PQY0 241 aa17.5■□□□□ 0.39
SS18-216ENST00000580751 DDX39AO00148 427 aaKnown RBP17.5■□□□□ 0.39
SS18-216ENST00000580751 BMP15O95972 392 aa17.5■□□□□ 0.39
SS18-216ENST00000580751 MCM4P33991 863 aa17.5■□□□□ 0.39
SS18-216ENST00000580751 TOB1P50616 345 aaPredicted RBP17.5■□□□□ 0.39
SS18-216ENST00000580751 ACTR2P61160 394 aa17.5■□□□□ 0.39
SS18-216ENST00000580751 PURAQ00577 322 aaKnown RBP17.5■□□□□ 0.39
SS18-216ENST00000580751 ZNF174Q15697 407 aa17.5■□□□□ 0.39
SS18-216ENST00000580751 CXCL17Q6UXB2 119 aa17.5■□□□□ 0.39
SS18-216ENST00000580751 SMAP1Q8IYB5 467 aaPredicted RBP17.5■□□□□ 0.39
SS18-216ENST00000580751 UIMC1Q96RL1 719 aa17.5■□□□□ 0.39
SS18-216ENST00000580751 STARD7Q9NQZ5 370 aa17.5■□□□□ 0.39
SS18-216ENST00000580751 PSMD10O75832 226 aa17.49■□□□□ 0.39
SS18-216ENST00000580751 YEATS4O95619 227 aa17.49■□□□□ 0.39
SS18-216ENST00000580751 OR52Z1P0C646 297 aa17.49■□□□□ 0.39
SS18-216ENST00000580751 SFNP31947 248 aa17.49■□□□□ 0.39
SS18-216ENST00000580751 TCF7P36402 384 aaPredicted RBP17.49■□□□□ 0.39
SS18-216ENST00000580751 DNM1Q05193 864 aaKnown RBP17.49■□□□□ 0.39
SS18-216ENST00000580751 HAS1Q92839 578 aa17.49■□□□□ 0.39
SS18-216ENST00000580751 FERMT2Q96AC1 680 aa17.49■□□□□ 0.39
SS18-216ENST00000580751 KATNAL1Q9BW62 490 aa17.49■□□□□ 0.39
SS18-216ENST00000580751 SENP6Q9GZR1 1112 aaPredicted RBP17.49■□□□□ 0.39
SS18-216ENST00000580751 PCDHB6Q9Y5E3 794 aa17.49■□□□□ 0.39
SS18-216ENST00000580751 WDR64B1ANS9 1081 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 LAD1O00515 517 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 CCNE2O96020 404 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 F2P00734 622 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 LGALS2P05162 132 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 ZNF286BP0CG31 522 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 NASPP49321 788 aaPredicted RBP17.48■□□□□ 0.39
SS18-216ENST00000580751 JAK3P52333 1124 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 NBR1Q14596 966 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 MIS18BP1Q6P0N0 1132 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 RDM1Q8NG50 284 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 VTI1AQ96AJ9 217 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 MTMR9Q96QG7 549 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 SEZ6LQ9BYH1 1024 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 AZI2Q9H6S1 392 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.48■□□□□ 0.39
SS18-216ENST00000580751 RCOR1Q9UKL0 485 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 ZNF215Q9UL58 517 aaPredicted RBP17.48■□□□□ 0.39
SS18-216ENST00000580751 CEP131Q9UPN4 1083 aa17.48■□□□□ 0.39
SS18-216ENST00000580751 EMSYQ7Z589 1322 aa17.47■□□□□ 0.39
SS18-216ENST00000580751 A0A0U1RQG5 324 aaPredicted RBP17.47■□□□□ 0.39
SS18-216ENST00000580751 GSTTP1A0A1W2PQM5 241 aa17.47■□□□□ 0.39
SS18-216ENST00000580751 CAPN15O75808 1086 aa17.47■□□□□ 0.39
SS18-216ENST00000580751 ATG7O95352 703 aa17.47■□□□□ 0.39
SS18-216ENST00000580751 SUPT20HL2P0C7V6 817 aa17.47■□□□□ 0.39
SS18-216ENST00000580751 PPP2R5CQ13362 524 aa17.47■□□□□ 0.39
SS18-216ENST00000580751 KCNG4Q8TDN1 519 aa17.47■□□□□ 0.39
SS18-216ENST00000580751 GJA10Q969M2 543 aa17.47■□□□□ 0.39
SS18-216ENST00000580751 TMEM60Q9H2L4 133 aa17.47■□□□□ 0.39
SS18-216ENST00000580751 UNC45AQ9H3U1 944 aa17.47■□□□□ 0.39
SS18-216ENST00000580751 VAV3Q9UKW4 847 aa17.47■□□□□ 0.39
SS18-216ENST00000580751 PCDHA12Q9UN75 941 aa17.47■□□□□ 0.39
SS18-216ENST00000580751 SAMM50Q9Y512 469 aa17.47■□□□□ 0.39
SS18-216ENST00000580751 PCDHA10Q9Y5I2 948 aa17.47■□□□□ 0.39
SS18-216ENST00000580751 SCN10AQ9Y5Y9 1956 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 MKI67P46013 3256 aaKnown RBP17.46■□□□□ 0.39
SS18-216ENST00000580751 CHMP2AO43633 222 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 PSAPP07602 524 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 TXKP42681 527 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 PTGDRQ13258 359 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 NFKBIBQ15653 356 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 UTP14CQ5TAP6 766 aaKnown RBP17.46■□□□□ 0.39
SS18-216ENST00000580751 FAM160B1Q5W0V3 765 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 B3GNT9Q6UX72 402 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 ABHD15Q6UXT9 468 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 GLG1Q92896 1179 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 C16orf70Q9BSU1 422 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 HTATIP2Q9BUP3 242 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 SMARCAD1Q9H4L7 1026 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 TTC12Q9H892 705 aaPredicted RBP17.46■□□□□ 0.39
SS18-216ENST00000580751 DISC1Q9NRI5 854 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 TELO2Q9Y4R8 837 aa17.46■□□□□ 0.39
SS18-216ENST00000580751 IGKV6D-21A0A0A0MT36 114 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 H3BRB1 525 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 BACH1O14867 736 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 LGR5O75473 907 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 PRPHP41219 470 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 SLC26A2P50443 739 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 ATP2C1P98194 919 aaPredicted RBP17.45■□□□□ 0.38
SS18-216ENST00000580751 ITGA7Q13683 1181 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 MFSD10Q14728 455 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 TMEM266Q2M3C6 531 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 C1orf53Q5VUE5 145 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 MIER3Q7Z3K6 550 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 TRIM50Q86XT4 487 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 KAT2BQ92831 832 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 SPATA32Q96LK8 384 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 USP28Q96RU2 1077 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 TUT1Q9H6E5 874 aaKnown RBP17.45■□□□□ 0.38
SS18-216ENST00000580751 ERAP1Q9NZ08 941 aa17.45■□□□□ 0.38
SS18-216ENST00000580751 DNAH12Q6ZR08 3092 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms