RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 BCAS3Q9H6U6 928 aa20.59■□□□□ 0.89
MKS1-209ENST00000580127 PSTPIP2Q9H939 334 aa20.59■□□□□ 0.89
MKS1-209ENST00000580127 RWDD3Q9Y3V2 267 aa20.59■□□□□ 0.89
MKS1-209ENST00000580127 COL4A4P53420 1690 aaPredicted RBP20.58■□□□□ 0.89
MKS1-209ENST00000580127 CCDC69A6NI79 296 aa20.58■□□□□ 0.89
MKS1-209ENST00000580127 MAFGO15525 162 aa20.58■□□□□ 0.89
MKS1-209ENST00000580127 ALADP13716 330 aa20.58■□□□□ 0.89
MKS1-209ENST00000580127 SSTR3P32745 418 aaPredicted RBP20.58■□□□□ 0.89
MKS1-209ENST00000580127 SP4Q02446 784 aa20.58■□□□□ 0.89
MKS1-209ENST00000580127 MKRN4PQ13434 485 aaPredicted RBP20.58■□□□□ 0.89
MKS1-209ENST00000580127 SLC35G1Q2M3R5 365 aa20.58■□□□□ 0.89
MKS1-209ENST00000580127 PTCRAQ6ISU1 281 aaPredicted RBP20.58■□□□□ 0.89
MKS1-209ENST00000580127 USP17L6PQ6QN14 398 aa20.58■□□□□ 0.89
MKS1-209ENST00000580127 FAM178BQ8IXR5 827 aa20.58■□□□□ 0.89
MKS1-209ENST00000580127 ZNF654Q8IZM8 581 aa20.58■□□□□ 0.89
MKS1-209ENST00000580127 GJD3Q8N144 294 aa20.58■□□□□ 0.89
MKS1-209ENST00000580127 FIBCD1Q8N539 461 aa20.58■□□□□ 0.89
MKS1-209ENST00000580127 SEPT1Q8WYJ6 367 aa20.58■□□□□ 0.89
MKS1-209ENST00000580127 GPRASP2Q96D09 838 aa20.58■□□□□ 0.89
MKS1-209ENST00000580127 SENP2Q9HC62 589 aa20.58■□□□□ 0.89
MKS1-209ENST00000580127 PI4K2BG5E9Z4 385 aa20.57■□□□□ 0.88
MKS1-209ENST00000580127 SGSM2O43147 1006 aa20.57■□□□□ 0.88
MKS1-209ENST00000580127 RB1P06400 928 aa20.57■□□□□ 0.88
MKS1-209ENST00000580127 GSPT1P15170 499 aaKnown RBP20.57■□□□□ 0.88
MKS1-209ENST00000580127 MCM5P33992 734 aa20.57■□□□□ 0.88
MKS1-209ENST00000580127 EP400NLQ6ZTU2 488 aa20.57■□□□□ 0.88
MKS1-209ENST00000580127 RPAINQ86UA6 219 aa20.57■□□□□ 0.88
MKS1-209ENST00000580127 LMBR1Q8WVP7 490 aa20.57■□□□□ 0.88
MKS1-209ENST00000580127 GLG1Q92896 1179 aa20.57■□□□□ 0.88
MKS1-209ENST00000580127 MAP4K1Q92918 833 aa20.57■□□□□ 0.88
MKS1-209ENST00000580127 EHMT1Q9H9B1 1298 aa20.57■□□□□ 0.88
MKS1-209ENST00000580127 ERAP1Q9NZ08 941 aa20.57■□□□□ 0.88
MKS1-209ENST00000580127 SPDYE3A6NKU9 549 aa20.56■□□□□ 0.88
MKS1-209ENST00000580127 TCF7P36402 384 aaPredicted RBP20.56■□□□□ 0.88
MKS1-209ENST00000580127 TMEM87BQ96K49 555 aa20.56■□□□□ 0.88
MKS1-209ENST00000580127 SMARCAD1Q9H4L7 1026 aa20.56■□□□□ 0.88
MKS1-209ENST00000580127 NSUN3Q9H649 340 aaKnown RBP20.56■□□□□ 0.88
MKS1-209ENST00000580127 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.55■□□□□ 0.88
MKS1-209ENST00000580127 GRXCR2A6NFK2 248 aa20.55■□□□□ 0.88
MKS1-209ENST00000580127 MEIS2O14770 477 aa20.55■□□□□ 0.88
MKS1-209ENST00000580127 ADAM17P78536 824 aa20.55■□□□□ 0.88
MKS1-209ENST00000580127 PPFIA1Q13136 1202 aa20.55■□□□□ 0.88
MKS1-209ENST00000580127 SEMA3FQ13275 785 aa20.55■□□□□ 0.88
MKS1-209ENST00000580127 TRIM50Q86XT4 487 aa20.55■□□□□ 0.88
MKS1-209ENST00000580127 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.55■□□□□ 0.88
MKS1-209ENST00000580127 PABPC5Q96DU9 382 aaKnown RBP20.55■□□□□ 0.88
MKS1-209ENST00000580127 C11orf84Q9BUA3 381 aaPredicted RBP20.55■□□□□ 0.88
MKS1-209ENST00000580127 LMAN2LQ9H0V9 348 aa20.55■□□□□ 0.88
MKS1-209ENST00000580127 RRN3P2A6NIE6 340 aa20.54■□□□□ 0.88
MKS1-209ENST00000580127 PRC1O43663 620 aa20.54■□□□□ 0.88
MKS1-209ENST00000580127 PDE4AP27815 886 aa20.54■□□□□ 0.88
MKS1-209ENST00000580127 CSPP1Q1MSJ5 1256 aa20.54■□□□□ 0.88
MKS1-209ENST00000580127 IER5Q5VY09 327 aa20.54■□□□□ 0.88
MKS1-209ENST00000580127 SYNE3Q6ZMZ3 975 aa20.54■□□□□ 0.88
MKS1-209ENST00000580127 MB21D2Q8IYB1 491 aaPredicted RBP20.54■□□□□ 0.88
MKS1-209ENST00000580127 LY9Q9HBG7 655 aa20.54■□□□□ 0.88
MKS1-209ENST00000580127 RBM8AQ9Y5S9 174 aaKnown RBP20.54■□□□□ 0.88
MKS1-209ENST00000580127 XIRP2A4UGR9 3374 aa20.54■□□□□ 0.88
MKS1-209ENST00000580127 M0QZ92 97 aa20.53■□□□□ 0.88
MKS1-209ENST00000580127 CHRNA1P02708 482 aa20.53■□□□□ 0.88
MKS1-209ENST00000580127 CTNNB1P35222 781 aa20.53■□□□□ 0.88
MKS1-209ENST00000580127 BMPR1AP36894 532 aa20.53■□□□□ 0.88
MKS1-209ENST00000580127 ANTXR2P58335 489 aa20.53■□□□□ 0.88
MKS1-209ENST00000580127 MTMR1Q13613 665 aa20.53■□□□□ 0.88
MKS1-209ENST00000580127 NEK9Q8TD19 979 aa20.53■□□□□ 0.88
MKS1-209ENST00000580127 UPF3BQ9BZI7 483 aaKnown RBP20.53■□□□□ 0.88
MKS1-209ENST00000580127 AZI2Q9H6S1 392 aa20.53■□□□□ 0.88
MKS1-209ENST00000580127 TUBE1Q9UJT0 475 aa20.53■□□□□ 0.88
MKS1-209ENST00000580127 DOCK5Q9H7D0 1870 aa20.53■□□□□ 0.88
MKS1-209ENST00000580127 GRIK4Q16099 956 aa20.52■□□□□ 0.88
MKS1-209ENST00000580127 TCEAL5Q5H9L2 206 aa20.52■□□□□ 0.88
MKS1-209ENST00000580127 FAM43BQ6ZT52 329 aaPredicted RBP20.52■□□□□ 0.88
MKS1-209ENST00000580127 TEX2Q8IWB9 1127 aa20.52■□□□□ 0.88
MKS1-209ENST00000580127 PPP2R3CQ969Q6 453 aa20.52■□□□□ 0.88
MKS1-209ENST00000580127 MYL10Q9BUA6 226 aa20.52■□□□□ 0.88
MKS1-209ENST00000580127 PRKAG3Q9UGI9 489 aa20.52■□□□□ 0.88
MKS1-209ENST00000580127 SLC12A7Q9Y666 1083 aa20.52■□□□□ 0.88
MKS1-209ENST00000580127 PRR33A8MZF0 331 aa20.51■□□□□ 0.87
MKS1-209ENST00000580127 C5orf67F2Z3F1 127 aa20.51■□□□□ 0.87
MKS1-209ENST00000580127 ENPP3O14638 875 aa20.51■□□□□ 0.87
MKS1-209ENST00000580127 GHRP10912 638 aa20.51■□□□□ 0.87
MKS1-209ENST00000580127 LIFRP42702 1097 aa20.51■□□□□ 0.87
MKS1-209ENST00000580127 BTG3Q14201 252 aaPredicted RBP20.51■□□□□ 0.87
MKS1-209ENST00000580127 PLVAPQ9BX97 442 aa20.51■□□□□ 0.87
MKS1-209ENST00000580127 FTHL17Q9BXU8 183 aa20.51■□□□□ 0.87
MKS1-209ENST00000580127 CD320Q9NPF0 282 aa20.51■□□□□ 0.87
MKS1-209ENST00000580127 RNF216Q9NWF9 866 aaPredicted RBP20.51■□□□□ 0.87
MKS1-209ENST00000580127 CLDND1Q9NY35 253 aa20.51■□□□□ 0.87
MKS1-209ENST00000580127 SQORQ9Y6N5 450 aa20.51■□□□□ 0.87
MKS1-209ENST00000580127 GSTTP1A0A1W2PQM5 241 aa20.5■□□□□ 0.87
MKS1-209ENST00000580127 H3BQ06 376 aaPredicted RBP20.5■□□□□ 0.87
MKS1-209ENST00000580127 ATP9AO75110 1047 aa20.5■□□□□ 0.87
MKS1-209ENST00000580127 IL9P15248 144 aa20.5■□□□□ 0.87
MKS1-209ENST00000580127 KCNA2P16389 499 aa20.5■□□□□ 0.87
MKS1-209ENST00000580127 SRBD1Q8N5C6 995 aaKnown RBP20.5■□□□□ 0.87
MKS1-209ENST00000580127 FANCBQ8NB91 859 aa20.5■□□□□ 0.87
MKS1-209ENST00000580127 DNAJB3Q8WWF6 145 aa20.5■□□□□ 0.87
MKS1-209ENST00000580127 JADE2Q9NQC1 790 aa20.5■□□□□ 0.87
MKS1-209ENST00000580127 UBIAD1Q9Y5Z9 338 aa20.5■□□□□ 0.87
MKS1-209ENST00000580127 TAF6LQ9Y6J9 622 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms