RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 MYH9P35579 1960 aaKnown RBP15.36■□□□□ 0.05
TRAF4-214ENST00000580073 TTC3P53804 2025 aa15.36■□□□□ 0.05
TRAF4-214ENST00000580073 CTSHP09668 335 aa15.36■□□□□ 0.05
TRAF4-214ENST00000580073 MRPS9P82933 396 aaKnown RBP15.36■□□□□ 0.05
TRAF4-214ENST00000580073 ARHGAP4P98171 946 aa15.36■□□□□ 0.05
TRAF4-214ENST00000580073 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-214ENST00000580073 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.36■□□□□ 0.05
TRAF4-214ENST00000580073 SPRED2Q7Z698 418 aa15.36■□□□□ 0.05
TRAF4-214ENST00000580073 ZNF654Q8IZM8 581 aa15.36■□□□□ 0.05
TRAF4-214ENST00000580073 TOP1MTQ969P6 601 aa15.36■□□□□ 0.05
TRAF4-214ENST00000580073 GPRASP2Q96D09 838 aa15.36■□□□□ 0.05
TRAF4-214ENST00000580073 IFIH1Q9BYX4 1025 aaKnown RBP15.36■□□□□ 0.05
TRAF4-214ENST00000580073 RNPEPQ9H4A4 650 aa15.36■□□□□ 0.05
TRAF4-214ENST00000580073 SLC27A2O14975 620 aa15.35■□□□□ 0.05
TRAF4-214ENST00000580073 NCK2O43639 380 aa15.35■□□□□ 0.05
TRAF4-214ENST00000580073 SEC24BO95487 1268 aa15.35■□□□□ 0.05
TRAF4-214ENST00000580073 TCTN1Q2MV58 587 aa15.35■□□□□ 0.05
TRAF4-214ENST00000580073 EPC2Q52LR7 807 aa15.35■□□□□ 0.05
TRAF4-214ENST00000580073 NFXL1Q6ZNB6 911 aa15.35■□□□□ 0.05
TRAF4-214ENST00000580073 LMBR1Q8WVP7 490 aa15.35■□□□□ 0.05
TRAF4-214ENST00000580073 GPKOWQ92917 476 aaPredicted RBP eCLIP15.35■□□□□ 0.05
TRAF4-214ENST00000580073 TMEM87BQ96K49 555 aa15.35■□□□□ 0.05
TRAF4-214ENST00000580073 C17orf80Q9BSJ5 609 aa15.35■□□□□ 0.05
TRAF4-214ENST00000580073 CCDC69A6NI79 296 aa15.34■□□□□ 0.05
TRAF4-214ENST00000580073 SPDYE3A6NKU9 549 aa15.34■□□□□ 0.05
TRAF4-214ENST00000580073 H3BNC9 293 aa15.34■□□□□ 0.05
TRAF4-214ENST00000580073 KCNA5P22460 613 aa15.34■□□□□ 0.05
TRAF4-214ENST00000580073 MCM5P33992 734 aa15.34■□□□□ 0.05
TRAF4-214ENST00000580073 HIC1Q14526 733 aa15.34■□□□□ 0.05
TRAF4-214ENST00000580073 FAM26DQ5JW98 314 aa15.34■□□□□ 0.05
TRAF4-214ENST00000580073 UTP14CQ5TAP6 766 aaKnown RBP15.34■□□□□ 0.05
TRAF4-214ENST00000580073 CREB3L3Q68CJ9 461 aa15.34■□□□□ 0.05
TRAF4-214ENST00000580073 RPAINQ86UA6 219 aa15.34■□□□□ 0.05
TRAF4-214ENST00000580073 TEX2Q8IWB9 1127 aa15.34■□□□□ 0.05
TRAF4-214ENST00000580073 MB21D2Q8IYB1 491 aaPredicted RBP15.34■□□□□ 0.05
TRAF4-214ENST00000580073 RASEFQ8IZ41 740 aa15.34■□□□□ 0.05
TRAF4-214ENST00000580073 C11orf84Q9BUA3 381 aaPredicted RBP15.34■□□□□ 0.05
TRAF4-214ENST00000580073 LMAN2LQ9H0V9 348 aa15.34■□□□□ 0.05
TRAF4-214ENST00000580073 NSUN3Q9H649 340 aaKnown RBP15.34■□□□□ 0.05
TRAF4-214ENST00000580073 ERAP1Q9NZ08 941 aa15.34■□□□□ 0.05
TRAF4-214ENST00000580073 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.33■□□□□ 0.04
TRAF4-214ENST00000580073 M0QZ92 97 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 GPR37L1O60883 481 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 UPP2O95045 317 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 TCF7P36402 384 aaPredicted RBP15.33■□□□□ 0.04
TRAF4-214ENST00000580073 SP4Q02446 784 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 PPFIA1Q13136 1202 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 SEMA3FQ13275 785 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 GPM6BQ13491 265 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 C8orf34Q49A92 452 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 PTCRAQ6ISU1 281 aaPredicted RBP15.33■□□□□ 0.04
TRAF4-214ENST00000580073 TRIM50Q86XT4 487 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 TMEM192Q8IY95 271 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 FIBCD1Q8N539 461 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 BANK1Q8NDB2 785 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 PIBF1Q8WXW3 757 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 SETD4Q9NVD3 440 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 RTEL1Q9NZ71 1219 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 TUBE1Q9UJT0 475 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 ADGRA3Q8IWK6 1321 aa15.33■□□□□ 0.04
TRAF4-214ENST00000580073 MAFGO15525 162 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 RB1P06400 928 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 ALADP13716 330 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 SSTR3P32745 418 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-214ENST00000580073 CTNNB1P35222 781 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 MTMR1Q13613 665 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 SLC35G1Q2M3R5 365 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 FAM43BQ6ZT52 329 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-214ENST00000580073 IGDCC4Q8TDY8 1250 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 SEPT1Q8WYJ6 367 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 GLG1Q92896 1179 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 PPP2R3CQ969Q6 453 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 PABPC5Q96DU9 382 aaKnown RBP15.32■□□□□ 0.04
TRAF4-214ENST00000580073 IL17RAQ96F46 866 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 ZFP91Q96JP5 570 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-214ENST00000580073 LRFN3Q9BTN0 628 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 SMARCAD1Q9H4L7 1026 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 PSTPIP2Q9H939 334 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 LY9Q9HBG7 655 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 WDR81Q562E7 1941 aa15.32■□□□□ 0.04
TRAF4-214ENST00000580073 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.31■□□□□ 0.04
TRAF4-214ENST00000580073 PRC1O43663 620 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 LIFRP42702 1097 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 ANTXR2P58335 489 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 ADAM17P78536 824 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 USP17L6PQ6QN14 398 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 TSHZ1Q6ZSZ6 1077 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 FAM178BQ8IXR5 827 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 GJD3Q8N144 294 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 KCNB2Q92953 911 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 FTHL17Q9BXU8 183 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 EPHX3Q9H6B9 360 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 AZI2Q9H6S1 392 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 SENP2Q9HC62 589 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 RNF216Q9NWF9 866 aaPredicted RBP15.31■□□□□ 0.04
TRAF4-214ENST00000580073 PRKAG3Q9UGI9 489 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 SLC12A7Q9Y666 1083 aa15.31■□□□□ 0.04
TRAF4-214ENST00000580073 RRN3P2A6NIE6 340 aa15.3■□□□□ 0.04
TRAF4-214ENST00000580073 C5orf67F2Z3F1 127 aa15.3■□□□□ 0.04
TRAF4-214ENST00000580073 PI4K2BG5E9Z4 385 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms