RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 ANKRD18AQ8IVF6 992 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 TRIML1Q8N9V2 468 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 FLAD1Q8NFF5 587 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 DDX54Q8TDD1 881 aaKnown RBP7.41□□□□□ -1.22
COPS3-216ENST00000579716 SNX21Q969T3 373 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 FAM81BQ96LP2 452 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 TACO1Q9BSH4 297 aaKnown RBP7.41□□□□□ -1.22
COPS3-216ENST00000579716 ATXN3LQ9H3M9 355 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 ZCCHC17Q9NP64 241 aaKnown RBP7.41□□□□□ -1.22
COPS3-216ENST00000579716 MED4Q9NPJ6 270 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 NLRC4Q9NPP4 1024 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 QPCTLQ9NXS2 382 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 HERC5Q9UII4 1024 aaKnown RBP7.41□□□□□ -1.22
COPS3-216ENST00000579716 BLOC1S6Q9UL45 172 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 N6AMT1Q9Y5N5 214 aa7.41□□□□□ -1.22
COPS3-216ENST00000579716 CCDC196A0A1B0GTZ2 297 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 CLASP2O75122 1294 aaKnown RBP7.4□□□□□ -1.22
COPS3-216ENST00000579716 CPNE3O75131 537 aaKnown RBP7.4□□□□□ -1.22
COPS3-216ENST00000579716 MMEP08473 750 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 SLFN14P0C7P3 912 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 RPS2P15880 293 aaKnown RBP7.4□□□□□ -1.22
COPS3-216ENST00000579716 RPS6KB1P23443 525 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 GNA15P30679 374 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 NTF4P34130 210 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 GTF2A2P52657 109 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 LRRC74AQ0VAA2 488 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 GRM1Q13255 1194 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 FYB2Q5VWT5 728 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 AP1ARQ63HQ0 302 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 ALG1LQ6GMV1 187 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 MPRIPQ6WCQ1 1025 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 RUFY3Q7L099 469 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 UBE3DQ7Z6J8 389 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 GALNT5Q7Z7M9 940 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 RNF168Q8IYW5 571 aaPredicted RBP7.4□□□□□ -1.22
COPS3-216ENST00000579716 CEP57L1Q8IYX8 460 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 EPS8L3Q8TE67 593 aaKnown RBP7.4□□□□□ -1.22
COPS3-216ENST00000579716 FBF1Q8TES7 1133 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 RTF1Q92541 710 aaKnown RBP7.4□□□□□ -1.22
COPS3-216ENST00000579716 ARHGEF2Q92974 986 aaKnown RBP7.4□□□□□ -1.22
COPS3-216ENST00000579716 GJA10Q969M2 543 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 DMRTB1Q96MA1 342 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 EIF2AK1Q9BQI3 630 aaKnown RBP7.4□□□□□ -1.22
COPS3-216ENST00000579716 KRTAP4-5Q9BYR2 181 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 KRT82Q9NSB4 513 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 TBC1D22BQ9NU19 505 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 SAGE1Q9NXZ1 904 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 NKIRAS2Q9NYR9 191 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 ZNF180Q9UJW8 692 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 FBXL5Q9UKA1 691 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 PCOLCE2Q9UKZ9 415 aa7.4□□□□□ -1.22
COPS3-216ENST00000579716 SYNJ2BP-COX16A0A087WUM0 186 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 VSTM5A8MXK1 200 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 INO80B-WBP1J3KQ70 363 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 EIF1AYO14602 144 aaKnown RBP7.39□□□□□ -1.23
COPS3-216ENST00000579716 GPR182O15218 404 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 KATNA1O75449 491 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 RFPL1O75677 317 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 B3GALNT1O75752 331 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 KRT38O76015 456 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 KRT1P04264 644 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 IFIT1P09914 478 aaKnown RBP7.39□□□□□ -1.23
COPS3-216ENST00000579716 HSPA5P11021 654 aaKnown RBP7.39□□□□□ -1.23
COPS3-216ENST00000579716 SFTPCP11686 197 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 MYCLP1P12525 358 aaPredicted RBP7.39□□□□□ -1.23
COPS3-216ENST00000579716 HOXD12P35452 270 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 TRDNQ13061 729 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 TNIP1Q15025 636 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 RRP12Q5JTH9 1297 aaKnown RBP7.39□□□□□ -1.23
COPS3-216ENST00000579716 SPATA1Q5VX52 437 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 FAAH2Q6GMR7 532 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 SLC23A3Q6PIS1 610 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 SYNE3Q6ZMZ3 975 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 C4orf50Q6ZRC1 276 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 THNSL2Q86YJ6 484 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 C7orf61Q8IZ16 206 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 NKAPQ8N5F7 415 aaKnown RBP7.39□□□□□ -1.23
COPS3-216ENST00000579716 LSMEM1Q8N8F7 131 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 ANKRD49Q8WVL7 239 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 HNRNPLLQ8WVV9 542 aaKnown RBP7.39□□□□□ -1.23
COPS3-216ENST00000579716 ZNF75CPQ92670 426 aaPredicted RBP7.39□□□□□ -1.23
COPS3-216ENST00000579716 JAKMIP2Q96AA8 810 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 HOOK2Q96ED9 719 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 HRASLS5Q96KN8 279 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 NUDT16L1Q9BRJ7 211 aaKnown RBP7.39□□□□□ -1.23
COPS3-216ENST00000579716 RTFDC1Q9BY42 306 aaPredicted RBP7.39□□□□□ -1.23
COPS3-216ENST00000579716 PIDD1Q9HB75 910 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 ATP6V0A4Q9HBG4 840 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 ATP8A2Q9NTI2 1148 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 BLOC1S4Q9NUP1 217 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 CACNA2D2Q9NY47 1150 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 TMX2Q9Y320 296 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 SNCAIPQ9Y6H5 919 aa7.39□□□□□ -1.23
COPS3-216ENST00000579716 TMEM265A0A087WTH1 108 aa7.38□□□□□ -1.23
COPS3-216ENST00000579716 CASQ2O14958 399 aaPredicted RBP7.38□□□□□ -1.23
COPS3-216ENST00000579716 NEMFO60524 1076 aa7.38□□□□□ -1.23
COPS3-216ENST00000579716 RNGTTO60942 597 aaKnown RBP7.38□□□□□ -1.23
COPS3-216ENST00000579716 ASMTLO95671 621 aa7.38□□□□□ -1.23
COPS3-216ENST00000579716 CFPP27918 469 aa7.38□□□□□ -1.23
COPS3-216ENST00000579716 PDE6CP51160 858 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms