RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 SYAP1Q96A49 352 aaPredicted RBP12.06□□□□□ -0.48
SS18-213ENST00000579640 CDK5RAP3Q96JB5 506 aa12.06□□□□□ -0.48
SS18-213ENST00000579640 MMTAG2Q9BU76 263 aaKnown RBP12.06□□□□□ -0.48
SS18-213ENST00000579640 MLXIPQ9HAP2 919 aa12.06□□□□□ -0.48
SS18-213ENST00000579640 TUFT1Q9NNX1 390 aa12.06□□□□□ -0.48
SS18-213ENST00000579640 PDGFCQ9NRA1 345 aa12.06□□□□□ -0.48
SS18-213ENST00000579640 DISC1Q9NRI5 854 aa12.06□□□□□ -0.48
SS18-213ENST00000579640 EML1O00423 815 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 POLR2DO15514 142 aaKnown RBP12.05□□□□□ -0.48
SS18-213ENST00000579640 NR1I2O75469 434 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 FARP2O94887 1054 aaPredicted RBP12.05□□□□□ -0.48
SS18-213ENST00000579640 ARIH2O95376 493 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 GH1P01241 217 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 ZNF865P0CJ78 1059 aaPredicted RBP12.05□□□□□ -0.48
SS18-213ENST00000579640 CDC25AP30304 524 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 CYP2C19P33261 490 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 LY6KQ17RY6 165 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 DUSP28Q4G0W2 176 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 RRAGBQ5VZM2 374 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 CYFIP1Q7L576 1253 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 EMID1Q96A84 441 aaPredicted RBP12.05□□□□□ -0.48
SS18-213ENST00000579640 HSD17B14Q9BPX1 270 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 EIF2AK1Q9BQI3 630 aaKnown RBP12.05□□□□□ -0.48
SS18-213ENST00000579640 CUEDC2Q9H467 287 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 DACT1Q9NYF0 836 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 TSKSQ9UJT2 592 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 SAMM50Q9Y512 469 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 PCDHA10Q9Y5I2 948 aa12.05□□□□□ -0.48
SS18-213ENST00000579640 ADCY3O60266 1144 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 DKC1O60832 514 aaKnown RBP eCLIP12.04□□□□□ -0.48
SS18-213ENST00000579640 CCNE2O96020 404 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 P4HBP07237 508 aaKnown RBP12.04□□□□□ -0.48
SS18-213ENST00000579640 PSAPP07602 524 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 ADCYAP1R1P41586 468 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 ACTR2P61160 394 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 LAMC2Q13753 1193 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 KARSQ15046 597 aaKnown RBP12.04□□□□□ -0.48
SS18-213ENST00000579640 CCDC144BQ3MJ40 725 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 TMEM119Q4V9L6 283 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 KANK3Q6NY19 840 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 MIS18BP1Q6P0N0 1132 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 DHX37Q8IY37 1157 aaKnown RBP12.04□□□□□ -0.48
SS18-213ENST00000579640 ELOA2Q8IYF1 753 aaPredicted RBP12.04□□□□□ -0.48
SS18-213ENST00000579640 PDILTQ8N807 584 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 MAGEF1Q9HAY2 307 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 STK17AQ9UEE5 414 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 FAM184BQ9ULE4 1060 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 ATG7O95352 703 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 HMGCRP04035 888 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 AKR1A1P14550 325 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 STAT6P42226 847 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 TNFAIP2Q03169 654 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 GRB10Q13322 594 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 E2F4Q16254 413 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 CATSPER3Q86XQ3 398 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 CEP57L1Q8IYX8 460 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 SLAIN1Q8ND83 568 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 DHX58Q96C10 678 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 PNMA5Q96PV4 448 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 Q9Y3F1 56 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 TRIM17Q9Y577 477 aa12.04□□□□□ -0.48
SS18-213ENST00000579640 DOCK5Q9H7D0 1870 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 A0A087X0B3 334 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 NOP56O00567 594 aaKnown RBP12.03□□□□□ -0.48
SS18-213ENST00000579640 CTAGE5O15320 804 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 MED24O75448 989 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 SLITRK3O94933 977 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 SLFN14P0C7P3 912 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 SUPT20HL2P0C7V6 817 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 SPATA31C1P0DKV0 1188 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 CYBAP13498 195 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 SMPD1P17405 629 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 PLCG1P19174 1290 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 ARHGAP1Q07960 439 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 ZRSR1Q15695 479 aaKnown RBP12.03□□□□□ -0.48
SS18-213ENST00000579640 PRAMEF19Q5SWL8 479 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 CCDC183Q5T5S1 534 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 ABHD15Q6UXT9 468 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 KRBA2Q6ZNG9 492 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 CNNM3Q8NE01 707 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 SEPT1Q8WYJ6 367 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 ATP6V0A1Q93050 837 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 DYDC2Q96IM9 177 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 PANK2Q9BZ23 570 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 NUP62CLQ9H1M0 184 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 CLSTN2Q9H4D0 955 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 ZSWIM4Q9H7M6 989 aa12.03□□□□□ -0.48
SS18-213ENST00000579640 HOOK1Q9UJC3 728 aaKnown RBP12.03□□□□□ -0.48
SS18-213ENST00000579640 POTEB3A0JP26 581 aa12.02□□□□□ -0.48
SS18-213ENST00000579640 ACTN4O43707 911 aaKnown RBP12.02□□□□□ -0.48
SS18-213ENST00000579640 LYPLA2O95372 231 aa12.02□□□□□ -0.48
SS18-213ENST00000579640 QARSP47897 775 aaKnown RBP12.02□□□□□ -0.48
SS18-213ENST00000579640 PSMC5P62195 406 aa12.02□□□□□ -0.48
SS18-213ENST00000579640 LONRF3Q496Y0 759 aa12.02□□□□□ -0.48
SS18-213ENST00000579640 CAVIN1Q6NZI2 390 aaKnown RBP12.02□□□□□ -0.48
SS18-213ENST00000579640 POTEBQ6S5H4 581 aa12.02□□□□□ -0.48
SS18-213ENST00000579640 PPTC7Q8NI37 304 aa12.02□□□□□ -0.48
SS18-213ENST00000579640 SPATA33Q96N06 139 aa12.02□□□□□ -0.48
SS18-213ENST00000579640 GPR20Q99678 358 aa12.02□□□□□ -0.48
SS18-213ENST00000579640 LXNQ9BS40 222 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms