RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 TTC14Q96N46 770 aa16.19■□□□□ 0.18
CSNK1D-211ENST00000579316 DDX19BQ9UMR2 479 aa16.19■□□□□ 0.18
CSNK1D-211ENST00000579316 MRPL42Q9Y6G3 142 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-211ENST00000579316 FSD2A1L4K1 749 aa16.18■□□□□ 0.18
CSNK1D-211ENST00000579316 ENPP3O14638 875 aa16.18■□□□□ 0.18
CSNK1D-211ENST00000579316 LGALS2P05162 132 aa16.18■□□□□ 0.18
CSNK1D-211ENST00000579316 TGFB3P10600 412 aa16.18■□□□□ 0.18
CSNK1D-211ENST00000579316 GNAT1P11488 350 aa16.18■□□□□ 0.18
CSNK1D-211ENST00000579316 UBA1P22314 1058 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-211ENST00000579316 CDC37Q16543 378 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-211ENST00000579316 TSHZ3Q63HK5 1081 aa16.18■□□□□ 0.18
CSNK1D-211ENST00000579316 FRMD5Q7Z6J6 570 aa16.18■□□□□ 0.18
CSNK1D-211ENST00000579316 ADSSL1Q8N142 457 aa16.18■□□□□ 0.18
CSNK1D-211ENST00000579316 CRIPAKQ8N1N5 446 aa16.18■□□□□ 0.18
CSNK1D-211ENST00000579316 POF1BQ8WVV4 589 aa16.18■□□□□ 0.18
CSNK1D-211ENST00000579316 CHRNA1P02708 482 aa16.17■□□□□ 0.18
CSNK1D-211ENST00000579316 HSPD1P10809 573 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-211ENST00000579316 MS4A1P11836 297 aa16.17■□□□□ 0.18
CSNK1D-211ENST00000579316 SP2Q02086 613 aa16.17■□□□□ 0.18
CSNK1D-211ENST00000579316 UBALD2Q8IYN6 164 aa16.17■□□□□ 0.18
CSNK1D-211ENST00000579316 KLHL23Q8NBE8 558 aa16.17■□□□□ 0.18
CSNK1D-211ENST00000579316 VN1R2Q8NFZ6 395 aa16.17■□□□□ 0.18
CSNK1D-211ENST00000579316 PDCD2LQ9BRP1 358 aa16.17■□□□□ 0.18
CSNK1D-211ENST00000579316 CCDC171Q6TFL3 1326 aa16.17■□□□□ 0.18
CSNK1D-211ENST00000579316 GHRP10912 638 aa16.16■□□□□ 0.18
CSNK1D-211ENST00000579316 HSD17B4P51659 736 aa16.16■□□□□ 0.18
CSNK1D-211ENST00000579316 LPIN1Q14693 890 aa16.16■□□□□ 0.18
CSNK1D-211ENST00000579316 ALX1Q15699 326 aa16.16■□□□□ 0.18
CSNK1D-211ENST00000579316 RBM23Q86U06 439 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-211ENST00000579316 VSIG10LQ86VR7 867 aa16.16■□□□□ 0.18
CSNK1D-211ENST00000579316 CDCA3Q99618 268 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-211ENST00000579316 CPVLQ9H3G5 476 aa16.16■□□□□ 0.18
CSNK1D-211ENST00000579316 TLE6Q9H808 572 aa16.16■□□□□ 0.18
CSNK1D-211ENST00000579316 SETD4Q9NVD3 440 aa16.16■□□□□ 0.18
CSNK1D-211ENST00000579316 MRPL11Q9Y3B7 192 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-211ENST00000579316 MED19A0JLT2 244 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-211ENST00000579316 SORBS3O60504 671 aa16.15■□□□□ 0.18
CSNK1D-211ENST00000579316 GOLGA8HP0CJ92 632 aa16.15■□□□□ 0.18
CSNK1D-211ENST00000579316 MGAT3Q09327 533 aa16.15■□□□□ 0.18
CSNK1D-211ENST00000579316 TMEM184AQ6ZMB5 413 aa16.15■□□□□ 0.18
CSNK1D-211ENST00000579316 ZBTB33Q86T24 672 aa16.15■□□□□ 0.18
CSNK1D-211ENST00000579316 KREMEN2Q8NCW0 462 aa16.15■□□□□ 0.18
CSNK1D-211ENST00000579316 LMBR1Q8WVP7 490 aa16.15■□□□□ 0.18
CSNK1D-211ENST00000579316 NEK1Q96PY6 1258 aa16.15■□□□□ 0.18
CSNK1D-211ENST00000579316 USP26Q9BXU7 913 aa16.15■□□□□ 0.18
CSNK1D-211ENST00000579316 UBA5Q9GZZ9 404 aa16.15■□□□□ 0.18
CSNK1D-211ENST00000579316 S1PR5Q9H228 398 aa16.15■□□□□ 0.18
CSNK1D-211ENST00000579316 PCDHGC5Q9Y5F6 944 aa16.15■□□□□ 0.18
CSNK1D-211ENST00000579316 OPLAHO14841 1288 aa16.14■□□□□ 0.17
CSNK1D-211ENST00000579316 UBE3AQ05086 875 aa16.14■□□□□ 0.17
CSNK1D-211ENST00000579316 MTMR3Q13615 1198 aa16.14■□□□□ 0.17
CSNK1D-211ENST00000579316 KCNC3Q14003 757 aa16.14■□□□□ 0.17
CSNK1D-211ENST00000579316 DUSP6Q16828 381 aa16.14■□□□□ 0.17
CSNK1D-211ENST00000579316 QRICH1Q2TAL8 776 aa16.14■□□□□ 0.17
CSNK1D-211ENST00000579316 VPS53Q5VIR6 699 aa16.14■□□□□ 0.17
CSNK1D-211ENST00000579316 ASTLQ6HA08 431 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-211ENST00000579316 STOX1Q6ZVD7 989 aa16.14■□□□□ 0.17
CSNK1D-211ENST00000579316 LINC01599Q8WXQ3 324 aa16.14■□□□□ 0.17
CSNK1D-211ENST00000579316 MLXIPQ9HAP2 919 aa16.14■□□□□ 0.17
CSNK1D-211ENST00000579316 MAP3K20Q9NYL2 800 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-211ENST00000579316 SORCS3Q9UPU3 1222 aa16.14■□□□□ 0.17
CSNK1D-211ENST00000579316 PLXNA4Q9HCM2 1894 aa16.14■□□□□ 0.17
CSNK1D-211ENST00000579316 CACNA1GO43497 2377 aa16.13■□□□□ 0.17
CSNK1D-211ENST00000579316 RBM10P98175 930 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-211ENST00000579316 RRP12Q5JTH9 1297 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-211ENST00000579316 FBXO47Q5MNV8 452 aa16.13■□□□□ 0.17
CSNK1D-211ENST00000579316 TAF2Q6P1X5 1199 aa16.13■□□□□ 0.17
CSNK1D-211ENST00000579316 NPAS4Q8IUM7 802 aa16.13■□□□□ 0.17
CSNK1D-211ENST00000579316 ADGRF4Q8IZF3 695 aa16.13■□□□□ 0.17
CSNK1D-211ENST00000579316 CHMP4BQ9H444 224 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-211ENST00000579316 TOMM22Q9NS69 142 aa16.13■□□□□ 0.17
CSNK1D-211ENST00000579316 TTC41PQ6P2S7 1318 aa16.13■□□□□ 0.17
CSNK1D-211ENST00000579316 OTOGLQ3ZCN5 2332 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 MYH6P13533 1939 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 ZFHX4Q86UP3 3567 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 BRD1O95696 1058 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 CFBP00751 764 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 MYCLP12524 364 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 CLCN5P51795 746 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 ARHGAP4P98171 946 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 PGM5Q15124 567 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 TSHZ1Q6ZSZ6 1077 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 IL31RAQ8NI17 732 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 PI4K2BQ8TCG2 481 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 GPKOWQ92917 476 aaPredicted RBP eCLIP16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 RMDN1Q96DB5 314 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 ZNF215Q9UL58 517 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 NR2E1Q9Y466 385 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 NRCAMQ92823 1304 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 MYO10Q9HD67 2058 aa16.12■□□□□ 0.17
CSNK1D-211ENST00000579316 NOP56O00567 594 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-211ENST00000579316 PER2O15055 1255 aa16.11■□□□□ 0.17
CSNK1D-211ENST00000579316 SRGAP2BP0DMP2 458 aa16.11■□□□□ 0.17
CSNK1D-211ENST00000579316 PCP11498 1178 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-211ENST00000579316 ANKRD54Q6NXT1 300 aa16.11■□□□□ 0.17
CSNK1D-211ENST00000579316 SYCE2Q6PIF2 218 aa16.11■□□□□ 0.17
CSNK1D-211ENST00000579316 METTL7BQ6UX53 244 aa16.11■□□□□ 0.17
CSNK1D-211ENST00000579316 RUFY4Q6ZNE9 571 aa16.11■□□□□ 0.17
CSNK1D-211ENST00000579316 DGKHQ86XP1 1220 aa16.11■□□□□ 0.17
CSNK1D-211ENST00000579316 TRIM50Q86XT4 487 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms