RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 OGFRQ9NZT2 677 aa22.56■■□□□ 1.2
SMG8-203ENST00000578922 RHOBTB3O94955 611 aa22.55■■□□□ 1.2
SMG8-203ENST00000578922 FCER1AP12319 257 aa22.55■■□□□ 1.2
SMG8-203ENST00000578922 CBX1P83916 185 aa22.55■■□□□ 1.2
SMG8-203ENST00000578922 TEKT3Q9BXF9 490 aa22.55■■□□□ 1.2
SMG8-203ENST00000578922 JADE2Q9NQC1 790 aa22.55■■□□□ 1.2
SMG8-203ENST00000578922 SAMSN1Q9NSI8 373 aaKnown RBP22.55■■□□□ 1.2
SMG8-203ENST00000578922 RAD51AP2Q09MP3 1159 aa22.55■■□□□ 1.2
SMG8-203ENST00000578922 E4F1Q66K89 784 aaPredicted RBP22.55■■□□□ 1.2
SMG8-203ENST00000578922 NCAPG2Q86XI2 1143 aa22.55■■□□□ 1.2
SMG8-203ENST00000578922 SPATC1LQ9H0A9 340 aa22.55■■□□□ 1.2
SMG8-203ENST00000578922 NPHP3-ACAD11A0A0J9YXS1 232 aa22.54■■□□□ 1.2
SMG8-203ENST00000578922 CELF2O95319 508 aaKnown RBP22.54■■□□□ 1.2
SMG8-203ENST00000578922 CACNB1Q02641 598 aaPredicted RBP22.54■■□□□ 1.2
SMG8-203ENST00000578922 PABPC4Q13310 644 aaKnown RBP eCLIP22.54■■□□□ 1.2
SMG8-203ENST00000578922 PPP2R5CQ13362 524 aa22.54■■□□□ 1.2
SMG8-203ENST00000578922 SNAPC2Q13487 334 aa22.54■■□□□ 1.2
SMG8-203ENST00000578922 FASTKD5Q7L8L6 764 aaKnown RBP22.54■■□□□ 1.2
SMG8-203ENST00000578922 TPH2Q8IWU9 490 aa22.54■■□□□ 1.2
SMG8-203ENST00000578922 ANKRD35Q8N283 1001 aa22.54■■□□□ 1.2
SMG8-203ENST00000578922 CCDC47Q96A33 483 aaKnown RBP22.54■■□□□ 1.2
SMG8-203ENST00000578922 DYDC2Q96IM9 177 aa22.54■■□□□ 1.2
SMG8-203ENST00000578922 NR3C2P08235 984 aa22.53■■□□□ 1.2
SMG8-203ENST00000578922 STK4Q13043 487 aa22.53■■□□□ 1.2
SMG8-203ENST00000578922 ITGB3BPQ13352 177 aaPredicted RBP22.53■■□□□ 1.2
SMG8-203ENST00000578922 GPAT2Q6NUI2 795 aa22.53■■□□□ 1.2
SMG8-203ENST00000578922 MB21D1Q8N884 522 aa22.53■■□□□ 1.2
SMG8-203ENST00000578922 NELFBQ8WX92 580 aa22.53■■□□□ 1.2
SMG8-203ENST00000578922 GTPBP4Q9BZE4 634 aaKnown RBP22.53■■□□□ 1.2
SMG8-203ENST00000578922 R3HDMLQ9H3Y0 253 aa22.53■■□□□ 1.2
SMG8-203ENST00000578922 GBA2Q9HCG7 927 aaPredicted RBP22.53■■□□□ 1.2
SMG8-203ENST00000578922 AGO4Q9HCK5 861 aaKnown RBP22.53■■□□□ 1.2
SMG8-203ENST00000578922 SERPINC1P01008 464 aa22.53■■□□□ 1.2
SMG8-203ENST00000578922 BCRP11274 1271 aa22.53■■□□□ 1.2
SMG8-203ENST00000578922 PAK1Q13153 545 aa22.53■■□□□ 1.2
SMG8-203ENST00000578922 GPBP1Q86WP2 473 aa22.53■■□□□ 1.2
SMG8-203ENST00000578922 GIMAP8Q8ND71 665 aaPredicted RBP22.53■■□□□ 1.2
SMG8-203ENST00000578922 NSUN6Q8TEA1 469 aaKnown RBP22.53■■□□□ 1.2
SMG8-203ENST00000578922 TXNRD2Q9NNW7 524 aa22.53■■□□□ 1.2
SMG8-203ENST00000578922 DNM3Q9UQ16 869 aa22.53■■□□□ 1.2
SMG8-203ENST00000578922 CNMDO75829 334 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 SLU7O95391 586 aaKnown RBP22.52■■□□□ 1.2
SMG8-203ENST00000578922 ZSCAN20P17040 1043 aaPredicted RBP22.52■■□□□ 1.2
SMG8-203ENST00000578922 CDK11BP21127 795 aaKnown RBP22.52■■□□□ 1.2
SMG8-203ENST00000578922 CCND2P30279 289 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 DMTNQ08495 405 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 ADSSL1Q8N142 457 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 CHST13Q8NET6 341 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 PPP1R13BQ96KQ4 1090 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 SLC39A2Q9NP94 309 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 UBASH3AP57075 661 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 CNTN2Q02246 1040 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 SPATA1Q5VX52 437 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 UNC13DQ70J99 1090 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 NIPA1Q7RTP0 329 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 RIOX2Q8IUF8 465 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 PIGOQ8TEQ8 1089 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 PKNOX2Q96KN3 472 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 RIT2Q99578 217 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 HSD17B14Q9BPX1 270 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 POLR3CQ9BUI4 534 aaPredicted RBP22.52■■□□□ 1.2
SMG8-203ENST00000578922 L2HGDHQ9H9P8 463 aa22.52■■□□□ 1.2
SMG8-203ENST00000578922 ZNF215Q9UL58 517 aaPredicted RBP22.52■■□□□ 1.2
SMG8-203ENST00000578922 TRIM49BA6NDI0 452 aa22.51■■□□□ 1.19
SMG8-203ENST00000578922 ATP9AO75110 1047 aa22.51■■□□□ 1.19
SMG8-203ENST00000578922 SLITRK3O94933 977 aa22.51■■□□□ 1.19
SMG8-203ENST00000578922 OSBPP22059 807 aa22.51■■□□□ 1.19
SMG8-203ENST00000578922 CT47A1Q5JQC4 288 aaPredicted RBP22.51■■□□□ 1.19
SMG8-203ENST00000578922 VSIG10LQ86VR7 867 aa22.51■■□□□ 1.19
SMG8-203ENST00000578922 MOV10L1Q9BXT6 1211 aaKnown RBP22.51■■□□□ 1.19
SMG8-203ENST00000578922 LRRC27Q9C0I9 530 aa22.51■■□□□ 1.19
SMG8-203ENST00000578922 STK24Q9Y6E0 443 aa22.51■■□□□ 1.19
SMG8-203ENST00000578922 ZBTB39O15060 712 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 DHX15O43143 795 aaKnown RBP22.5■■□□□ 1.19
SMG8-203ENST00000578922 SLC26A4O43511 780 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 CYP2C8P10632 490 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 SLC12A3P55017 1021 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 Q3C1V9 767 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 ZNF397Q8NF99 534 aaPredicted RBP22.5■■□□□ 1.19
SMG8-203ENST00000578922 DNAJC19Q96DA6 116 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 RBPJLQ9UBG7 517 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 RWDD2AQ9UIY3 292 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 A0A0G2JMZ2 1700 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 KRT18P05783 430 aaKnown RBP22.5■■□□□ 1.19
SMG8-203ENST00000578922 CYP11B2P19099 503 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 PTPN21Q16825 1174 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 C2orf69Q8N8R5 385 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 KIAA0895Q8NCT3 520 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 BANK1Q8NDB2 785 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 BHMT2Q9H2M3 363 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 BMP2KQ9NSY1 1161 aaPredicted RBP22.5■■□□□ 1.19
SMG8-203ENST00000578922 PRDM4Q9UKN5 801 aa22.5■■□□□ 1.19
SMG8-203ENST00000578922 ZNF18P17022 549 aa22.49■■□□□ 1.19
SMG8-203ENST00000578922 ERCC3P19447 782 aa22.49■■□□□ 1.19
SMG8-203ENST00000578922 PMS1P54277 932 aaKnown RBP22.49■■□□□ 1.19
SMG8-203ENST00000578922 STIM1Q13586 685 aa22.49■■□□□ 1.19
SMG8-203ENST00000578922 CNNM4Q6P4Q7 775 aa22.49■■□□□ 1.19
SMG8-203ENST00000578922 MIER3Q7Z3K6 550 aa22.49■■□□□ 1.19
SMG8-203ENST00000578922 WRAP73Q9P2S5 460 aaPredicted RBP22.49■■□□□ 1.19
SMG8-203ENST00000578922 DDX41Q9UJV9 622 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms