RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 CEP290O15078 2479 aa24.6■■□□□ 1.53
CDC42EP4-203ENST00000578516 HAS3O00219 553 aa24.59■■□□□ 1.53
CDC42EP4-203ENST00000578516 CHMP2AO43633 222 aa24.59■■□□□ 1.53
CDC42EP4-203ENST00000578516 B4GALT4O60513 344 aa24.59■■□□□ 1.53
CDC42EP4-203ENST00000578516 KPNA6O60684 536 aa24.59■■□□□ 1.53
CDC42EP4-203ENST00000578516 MARK3P27448 753 aa24.59■■□□□ 1.53
CDC42EP4-203ENST00000578516 KIAA0753Q2KHM9 967 aa24.59■■□□□ 1.53
CDC42EP4-203ENST00000578516 C1orf53Q5VUE5 145 aa24.59■■□□□ 1.53
CDC42EP4-203ENST00000578516 MCTP1Q6DN14 999 aa24.59■■□□□ 1.53
CDC42EP4-203ENST00000578516 SLC5A5Q92911 643 aa24.59■■□□□ 1.53
CDC42EP4-203ENST00000578516 SCN5AQ14524 2016 aa24.59■■□□□ 1.53
CDC42EP4-203ENST00000578516 MYH15Q9Y2K3 1946 aa24.59■■□□□ 1.53
CDC42EP4-203ENST00000578516 TRIM43BA6NCK2 446 aa24.58■■□□□ 1.53
CDC42EP4-203ENST00000578516 PPFIA4O75335 1185 aa24.58■■□□□ 1.53
CDC42EP4-203ENST00000578516 ZNF200P98182 395 aaPredicted RBP24.58■■□□□ 1.53
CDC42EP4-203ENST00000578516 FAAP100Q0VG06 881 aa24.58■■□□□ 1.53
CDC42EP4-203ENST00000578516 GNL2Q13823 731 aaKnown RBP24.58■■□□□ 1.53
CDC42EP4-203ENST00000578516 MOXD1Q6UVY6 613 aa24.58■■□□□ 1.53
CDC42EP4-203ENST00000578516 TRIM43Q96BQ3 446 aaPredicted RBP24.58■■□□□ 1.53
CDC42EP4-203ENST00000578516 FOXP1Q9H334 677 aaPredicted RBP24.58■■□□□ 1.53
CDC42EP4-203ENST00000578516 UNC45AQ9H3U1 944 aa24.58■■□□□ 1.53
CDC42EP4-203ENST00000578516 HDAC6Q9UBN7 1215 aa24.58■■□□□ 1.53
CDC42EP4-203ENST00000578516 ITGB8P26012 769 aa24.57■■□□□ 1.52
CDC42EP4-203ENST00000578516 LRCH2Q5VUJ6 765 aa24.57■■□□□ 1.52
CDC42EP4-203ENST00000578516 LARP1BQ659C4 914 aaKnown RBP24.57■■□□□ 1.52
CDC42EP4-203ENST00000578516 GDF6Q6KF10 455 aaPredicted RBP24.57■■□□□ 1.52
CDC42EP4-203ENST00000578516 ANKRD33Q7Z3H0 272 aa24.57■■□□□ 1.52
CDC42EP4-203ENST00000578516 NOSTRINQ8IVI9 506 aa24.57■■□□□ 1.52
CDC42EP4-203ENST00000578516 SEPT1Q8WYJ6 367 aa24.57■■□□□ 1.52
CDC42EP4-203ENST00000578516 TMEM60Q9H2L4 133 aa24.57■■□□□ 1.52
CDC42EP4-203ENST00000578516 KIF3AQ9Y496 699 aa24.57■■□□□ 1.52
CDC42EP4-203ENST00000578516 TANC1Q9C0D5 1861 aa24.57■■□□□ 1.52
CDC42EP4-203ENST00000578516 VPS37CA5D8V6 355 aaPredicted RBP24.56■■□□□ 1.52
CDC42EP4-203ENST00000578516 H3BQV1 296 aa24.56■■□□□ 1.52
CDC42EP4-203ENST00000578516 H3BRB1 525 aa24.56■■□□□ 1.52
CDC42EP4-203ENST00000578516 GAS7O60861 476 aa24.56■■□□□ 1.52
CDC42EP4-203ENST00000578516 CLTBP09497 229 aa24.56■■□□□ 1.52
CDC42EP4-203ENST00000578516 CCDC60Q8IWA6 550 aaPredicted RBP24.56■■□□□ 1.52
CDC42EP4-203ENST00000578516 HAS1Q92839 578 aa24.56■■□□□ 1.52
CDC42EP4-203ENST00000578516 CTAGE1Q96RT6 745 aa24.56■■□□□ 1.52
CDC42EP4-203ENST00000578516 TUT1Q9H6E5 874 aaKnown RBP24.56■■□□□ 1.52
CDC42EP4-203ENST00000578516 KCNMB3Q9NPA1 279 aa24.56■■□□□ 1.52
CDC42EP4-203ENST00000578516 UMODL1Q5DID0 1318 aa24.56■■□□□ 1.52
CDC42EP4-203ENST00000578516 PSMD10O75832 226 aa24.55■■□□□ 1.52
CDC42EP4-203ENST00000578516 CD4P01730 458 aa24.55■■□□□ 1.52
CDC42EP4-203ENST00000578516 SUPT20HL2P0C7V6 817 aa24.55■■□□□ 1.52
CDC42EP4-203ENST00000578516 CYP2C9P11712 490 aa24.55■■□□□ 1.52
CDC42EP4-203ENST00000578516 GCFC2P16383 781 aaKnown RBP24.55■■□□□ 1.52
CDC42EP4-203ENST00000578516 U2AF2P26368 475 aaKnown RBP eCLIP24.55■■□□□ 1.52
CDC42EP4-203ENST00000578516 MCM7P33993 719 aa24.55■■□□□ 1.52
CDC42EP4-203ENST00000578516 TOB1P50616 345 aaPredicted RBP24.55■■□□□ 1.52
CDC42EP4-203ENST00000578516 PPP4R3AQ6IN85 833 aa24.55■■□□□ 1.52
CDC42EP4-203ENST00000578516 TEKT3Q9BXF9 490 aa24.55■■□□□ 1.52
CDC42EP4-203ENST00000578516 RNPEPQ9H4A4 650 aa24.55■■□□□ 1.52
CDC42EP4-203ENST00000578516 LGR5O75473 907 aa24.54■■□□□ 1.52
CDC42EP4-203ENST00000578516 SMIM10L2AP0DMW4 78 aa24.54■■□□□ 1.52
CDC42EP4-203ENST00000578516 SMIM10L2BP0DMW5 78 aa24.54■■□□□ 1.52
CDC42EP4-203ENST00000578516 ZNF174Q15697 407 aa24.54■■□□□ 1.52
CDC42EP4-203ENST00000578516 UGCGQ16739 394 aa24.54■■□□□ 1.52
CDC42EP4-203ENST00000578516 ABHD15Q6UXT9 468 aa24.54■■□□□ 1.52
CDC42EP4-203ENST00000578516 FERMT3Q86UX7 667 aa24.54■■□□□ 1.52
CDC42EP4-203ENST00000578516 ZBTB10Q96DT7 871 aa24.54■■□□□ 1.52
CDC42EP4-203ENST00000578516 PPP1R12CQ9BZL4 782 aa24.54■■□□□ 1.52
CDC42EP4-203ENST00000578516 VAV3Q9UKW4 847 aa24.54■■□□□ 1.52
CDC42EP4-203ENST00000578516 TBX21Q9UL17 535 aa24.54■■□□□ 1.52
CDC42EP4-203ENST00000578516 NR2E3Q9Y5X4 410 aa24.54■■□□□ 1.52
CDC42EP4-203ENST00000578516 EMSYQ7Z589 1322 aa24.54■■□□□ 1.52
CDC42EP4-203ENST00000578516 DCDC2CA8MYV0 355 aa24.53■■□□□ 1.52
CDC42EP4-203ENST00000578516 EML1O00423 815 aa24.53■■□□□ 1.52
CDC42EP4-203ENST00000578516 ATG7O95352 703 aa24.53■■□□□ 1.52
CDC42EP4-203ENST00000578516 TTC38Q5R3I4 469 aa24.53■■□□□ 1.52
CDC42EP4-203ENST00000578516 NFRKBQ6P4R8 1299 aa24.53■■□□□ 1.52
CDC42EP4-203ENST00000578516 GLG1Q92896 1179 aa24.53■■□□□ 1.52
CDC42EP4-203ENST00000578516 WNT8BQ93098 351 aa24.53■■□□□ 1.52
CDC42EP4-203ENST00000578516 INTS4Q96HW7 963 aaKnown RBP24.53■■□□□ 1.52
CDC42EP4-203ENST00000578516 KATNAL1Q9BW62 490 aa24.53■■□□□ 1.52
CDC42EP4-203ENST00000578516 TBC1D22BQ9NU19 505 aa24.53■■□□□ 1.52
CDC42EP4-203ENST00000578516 TMEM39AQ9NV64 488 aa24.53■■□□□ 1.52
CDC42EP4-203ENST00000578516 GTF2IRD1Q9UHL9 959 aa24.53■■□□□ 1.52
CDC42EP4-203ENST00000578516 SIP14410 1827 aa24.53■■□□□ 1.52
CDC42EP4-203ENST00000578516 BACH1O14867 736 aa24.52■■□□□ 1.52
CDC42EP4-203ENST00000578516 NEMFO60524 1076 aa24.52■■□□□ 1.52
CDC42EP4-203ENST00000578516 MDM2Q00987 491 aaPredicted RBP24.52■■□□□ 1.52
CDC42EP4-203ENST00000578516 ZNF746Q6NUN9 644 aaPredicted RBP24.52■■□□□ 1.52
CDC42EP4-203ENST00000578516 TRMT1LQ7Z2T5 733 aaKnown RBP24.52■■□□□ 1.52
CDC42EP4-203ENST00000578516 C7orf31Q8N865 590 aa24.52■■□□□ 1.52
CDC42EP4-203ENST00000578516 TOX2Q96NM4 488 aa24.52■■□□□ 1.52
CDC42EP4-203ENST00000578516 RIT2Q99578 217 aa24.52■■□□□ 1.52
CDC42EP4-203ENST00000578516 PCDHB6Q9Y5E3 794 aa24.52■■□□□ 1.52
CDC42EP4-203ENST00000578516 MROH7Q68CQ1 1323 aa24.52■■□□□ 1.52
CDC42EP4-203ENST00000578516 EVPLQ92817 2033 aa24.52■■□□□ 1.52
CDC42EP4-203ENST00000578516 IGKV6D-21A0A0A0MT36 114 aa24.51■■□□□ 1.51
CDC42EP4-203ENST00000578516 SYT1P21579 422 aa24.51■■□□□ 1.51
CDC42EP4-203ENST00000578516 KRT76Q01546 638 aa24.51■■□□□ 1.51
CDC42EP4-203ENST00000578516 SWSAP1Q6NVH7 229 aa24.51■■□□□ 1.51
CDC42EP4-203ENST00000578516 B3GNT9Q6UX72 402 aa24.51■■□□□ 1.51
CDC42EP4-203ENST00000578516 TRAPPC12Q8WVT3 735 aa24.51■■□□□ 1.51
CDC42EP4-203ENST00000578516 DHX38Q92620 1227 aaKnown RBP24.51■■□□□ 1.51
CDC42EP4-203ENST00000578516 SETD4Q9NVD3 440 aa24.51■■□□□ 1.51
CDC42EP4-203ENST00000578516 SAMM50Q9Y512 469 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms