RNA–Protein interactions for RNA: ENST00000578194.5

CSNK1D-207, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-207ENST00000578194 LBHD1Q9BQE6 289 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-207ENST00000578194 TEKT3Q9BXF9 490 aa14.37□□□□□ -0.11
CSNK1D-207ENST00000578194 FOXP1Q9H334 677 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-207ENST00000578194 SMARCAD1Q9H4L7 1026 aa14.37□□□□□ -0.11
CSNK1D-207ENST00000578194 TUT1Q9H6E5 874 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-207ENST00000578194 AZI2Q9H6S1 392 aa14.37□□□□□ -0.11
CSNK1D-207ENST00000578194 NOD1Q9Y239 953 aa14.37□□□□□ -0.11
CSNK1D-207ENST00000578194 EMSYQ7Z589 1322 aa14.37□□□□□ -0.11
CSNK1D-207ENST00000578194 GSTTP1A0A1W2PQM5 241 aa14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 K7ELQ4 463 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 MSH4O15457 936 aa14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 EDIL3O43854 480 aa14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 CCNT1O60563 726 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 GAS7O60861 476 aa14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 CD4P01730 458 aa14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 RAG1P15918 1043 aa14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 ZNF746Q6NUN9 644 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 MIS18BP1Q6P0N0 1132 aa14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 HSCBQ8IWL3 235 aa14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 SMAP1Q8IYB5 467 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 GLG1Q92896 1179 aa14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 SLC5A5Q92911 643 aa14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 SNX21Q969T3 373 aa14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 ERAP1Q9NZ08 941 aa14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 BRCA2P51587 3418 aa14.36□□□□□ -0.11
CSNK1D-207ENST00000578194 TRIP12Q14669 1992 aaPredicted RBP14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 FAM205CA6NFA0 338 aa14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 H3BQV1 296 aa14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 DHX15O43143 795 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 MARCH6O60337 910 aa14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 B4GALT4O60513 344 aa14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 LGR5O75473 907 aa14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 EARS2Q5JPH6 523 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 LRCH2Q5VUJ6 765 aa14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 FAM160B1Q5W0V3 765 aa14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 TNPO1Q92973 898 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 FAM20AQ96MK3 541 aa14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 UIMC1Q96RL1 719 aa14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 TRPV6Q9H1D0 765 aa14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 HDAC6Q9UBN7 1215 aa14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 TBX21Q9UL17 535 aa14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 NOL7Q9UMY1 257 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-207ENST00000578194 TRIM43BA6NCK2 446 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 WDR64B1ANS9 1081 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 BACH1O14867 736 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 TBX3O15119 743 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 ATG7O95352 703 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 BAG4O95429 457 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 CCNE2O96020 404 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 PSAPP07602 524 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 GNAT1P11488 350 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 SFNP31947 248 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 SLC26A2P50443 739 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 JAK3P52333 1124 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 PTGISQ16647 500 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 SH3RF1Q7Z6J0 888 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 TRIM50Q86XT4 487 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 NOSTRINQ8IVI9 506 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 CCDC155Q8N6L0 562 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 TRIM43Q96BQ3 446 aaPredicted RBP14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 INTS4Q96HW7 963 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 TRMT13Q9NUP7 481 aaKnown RBP14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 GTF2IRD1Q9UHL9 959 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 TELO2Q9Y4R8 837 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 SAMM50Q9Y512 469 aa14.34□□□□□ -0.11
CSNK1D-207ENST00000578194 C17orf102A2RUQ5 167 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 SLC37A4O43826 429 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 TIMP1P01033 207 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 SMIM10L2AP0DMW4 78 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 SMIM10L2BP0DMW5 78 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 PDCP20941 246 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 MAGEA10P43363 369 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 TRAPPC10P48553 1259 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 STAT5BP51692 787 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 ORC2Q13416 577 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 LARP1BQ659C4 914 aaKnown RBP14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 GDF6Q6KF10 455 aaPredicted RBP14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 ABHD15Q6UXT9 468 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 PLPPR4Q7Z2D5 763 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 SLFN12Q8IYM2 578 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 RDM1Q8NG50 284 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 ETNPPLQ8TBG4 499 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 PPP1R13LQ8WUF5 828 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 HIPK3Q9H422 1215 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 ZNF302Q9NR11 478 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 PCDHA10Q9Y5I2 948 aa14.33□□□□□ -0.12
CSNK1D-207ENST00000578194 PSMD10O75832 226 aa14.32□□□□□ -0.12
CSNK1D-207ENST00000578194 U2AF2P26368 475 aaKnown RBP eCLIP14.32□□□□□ -0.129e-9■■■■■ 27.8
CSNK1D-207ENST00000578194 MDM2Q00987 491 aaPredicted RBP14.32□□□□□ -0.12
CSNK1D-207ENST00000578194 BFSP2Q13515 415 aa14.32□□□□□ -0.12
CSNK1D-207ENST00000578194 MCTP1Q6DN14 999 aa14.32□□□□□ -0.12
CSNK1D-207ENST00000578194 TMEM199Q8N511 208 aa14.32□□□□□ -0.12
CSNK1D-207ENST00000578194 RETREG2Q8NC44 543 aa14.32□□□□□ -0.12
CSNK1D-207ENST00000578194 AFAP1L1Q8TED9 768 aa14.32□□□□□ -0.12
CSNK1D-207ENST00000578194 GDF15Q99988 308 aa14.32□□□□□ -0.12
CSNK1D-207ENST00000578194 NOC4LQ9BVI4 516 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-207ENST00000578194 PPP1R12CQ9BZL4 782 aa14.32□□□□□ -0.12
CSNK1D-207ENST00000578194 KCNMB3Q9NPA1 279 aa14.32□□□□□ -0.12
CSNK1D-207ENST00000578194 TANC1Q9C0D5 1861 aa14.31□□□□□ -0.12
CSNK1D-207ENST00000578194 IGKV6D-21A0A0A0MT36 114 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms