RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 HSF5Q4G112 596 aaPredicted RBP5.93□□□□□ -1.46
IFT20-205ENST00000578009 TTC22Q5TAA0 569 aa5.93□□□□□ -1.46
IFT20-205ENST00000578009 TTC5Q8N0Z6 440 aa5.93□□□□□ -1.46
IFT20-205ENST00000578009 TP53I13Q8NBR0 393 aaPredicted RBP5.93□□□□□ -1.46
IFT20-205ENST00000578009 C22orf23Q9BZE7 217 aa5.93□□□□□ -1.46
IFT20-205ENST00000578009 LRRCC1Q9C099 1032 aa5.93□□□□□ -1.46
IFT20-205ENST00000578009 USP35Q9P2H5 1018 aa5.93□□□□□ -1.46
IFT20-205ENST00000578009 TNFRSF10DQ9UBN6 386 aa5.93□□□□□ -1.46
IFT20-205ENST00000578009 GPR55Q9Y2T6 319 aaPredicted RBP5.93□□□□□ -1.46
IFT20-205ENST00000578009 COL5A2P05997 1499 aaPredicted RBP5.93□□□□□ -1.46
IFT20-205ENST00000578009 AOX1Q06278 1338 aa5.93□□□□□ -1.46
IFT20-205ENST00000578009 ADCY9O60503 1353 aa5.93□□□□□ -1.46
IFT20-205ENST00000578009 NHSL1Q5SYE7 1610 aa5.92□□□□□ -1.46
IFT20-205ENST00000578009 PKD1L3Q7Z443 1732 aa5.92□□□□□ -1.46
IFT20-205ENST00000578009 EPB41L2O43491 1005 aaKnown RBP5.92□□□□□ -1.46
IFT20-205ENST00000578009 PRAMEF1O95521 474 aa5.92□□□□□ -1.46
IFT20-205ENST00000578009 PRKCAP17252 672 aa5.92□□□□□ -1.46
IFT20-205ENST00000578009 KCNC1P48547 511 aa5.92□□□□□ -1.46
IFT20-205ENST00000578009 EVA1CP58658 441 aa5.92□□□□□ -1.46
IFT20-205ENST00000578009 CYP4F8P98187 520 aa5.92□□□□□ -1.46
IFT20-205ENST00000578009 LAPTM5Q13571 262 aa5.92□□□□□ -1.46
IFT20-205ENST00000578009 SNW1Q13573 536 aaKnown RBP5.92□□□□□ -1.46
IFT20-205ENST00000578009 RTP5Q14D33 572 aa5.92□□□□□ -1.46
IFT20-205ENST00000578009 NBPF9Q3BBW0 867 aa5.92□□□□□ -1.46
IFT20-205ENST00000578009 TOM1L2Q6ZVM7 507 aa5.92□□□□□ -1.46
IFT20-205ENST00000578009 ZNF496Q96IT1 587 aaPredicted RBP5.92□□□□□ -1.46
IFT20-205ENST00000578009 FCRL2Q96LA5 508 aaPredicted RBP5.92□□□□□ -1.46
IFT20-205ENST00000578009 PCDHA5Q9Y5H7 936 aa5.92□□□□□ -1.46
IFT20-205ENST00000578009 SIPA1L3O60292 1781 aaPredicted RBP5.92□□□□□ -1.46
IFT20-205ENST00000578009 N4BP2Q86UW6 1770 aaPredicted RBP5.92□□□□□ -1.46
IFT20-205ENST00000578009 SALL3Q9BXA9 1300 aa5.92□□□□□ -1.46
IFT20-205ENST00000578009 VIRMAQ69YN4 1812 aaKnown RBP5.92□□□□□ -1.46
IFT20-205ENST00000578009 COL15A1P39059 1388 aa5.92□□□□□ -1.46
IFT20-205ENST00000578009 RGPD5Q99666 1765 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 SCN11AQ9UI33 1791 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 PNMA6EA0A0J9YXQ4 647 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 FADS2P1A8MWK0 482 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 PRICKLE3O43900 615 aaPredicted RBP5.91□□□□□ -1.46
IFT20-205ENST00000578009 UBOX5O94941 541 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 RAG1P15918 1043 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 ST13P50502 369 aaKnown RBP5.91□□□□□ -1.46
IFT20-205ENST00000578009 PDE1AP54750 535 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 NEXNQ0ZGT2 675 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 ARSHQ5FYA8 562 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 CASC1Q6TDU7 716 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 LRP10Q7Z4F1 713 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 NUP43Q8NFH3 380 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 SNX21Q969T3 373 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 TEX13AQ9BXU3 409 aaPredicted RBP5.91□□□□□ -1.46
IFT20-205ENST00000578009 MINPP1Q9UNW1 487 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 MAP3K2Q9Y2U5 619 aa5.91□□□□□ -1.46
IFT20-205ENST00000578009 LRRFIP2Q9Y608 721 aaKnown RBP5.91□□□□□ -1.46
IFT20-205ENST00000578009 AHDC1Q5TGY3 1603 aaPredicted RBP5.91□□□□□ -1.46
IFT20-205ENST00000578009 PARP4Q9UKK3 1724 aaKnown RBP5.91□□□□□ -1.46
IFT20-205ENST00000578009 GRM8O00222 908 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 FFAR3O14843 346 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 NBPF7P0C2Y1 421 aaPredicted RBP5.9□□□□□ -1.46
IFT20-205ENST00000578009 GSPT1P15170 499 aaKnown RBP5.9□□□□□ -1.46
IFT20-205ENST00000578009 SDSP20132 328 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 GBP2P32456 591 aaPredicted RBP5.9□□□□□ -1.46
IFT20-205ENST00000578009 LIMS1P48059 325 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 SLURP1P55000 103 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 FAM160A1Q05DH4 1040 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 PSMD2Q13200 908 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 SLC39A6Q13433 755 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 PROSER3Q2NL68 480 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 EAPPQ56P03 285 aaPredicted RBP5.9□□□□□ -1.46
IFT20-205ENST00000578009 NBPF12Q5TAG4 269 aaPredicted RBP5.9□□□□□ -1.46
IFT20-205ENST00000578009 PPP1R42Q7Z4L9 355 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 ERC1Q8IUD2 1116 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 C16orf71Q8IYS4 520 aaPredicted RBP5.9□□□□□ -1.46
IFT20-205ENST00000578009 PLBD2Q8NHP8 589 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 KIF1BPQ96EK5 621 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 GPR20Q99678 358 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 CDADC1Q9BWV3 514 aa5.9□□□□□ -1.46
IFT20-205ENST00000578009 C9orf78Q9NZ63 289 aaPredicted RBP5.9□□□□□ -1.46
IFT20-205ENST00000578009 USP42Q9H9J4 1324 aaKnown RBP5.9□□□□□ -1.47
IFT20-205ENST00000578009 MEIS1O00470 390 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 SRGAP3O43295 1099 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 SIGLEC6O43699 453 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 SURF6O75683 361 aaKnown RBP5.89□□□□□ -1.47
IFT20-205ENST00000578009 REC8O95072 547 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 IGKV5-2P06315 115 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 MX1P20591 662 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 MFAP1P55081 439 aaKnown RBP5.89□□□□□ -1.47
IFT20-205ENST00000578009 SNAP47Q5SQN1 464 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 UBXN11Q5T124 520 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 HHIPL2Q6UWX4 724 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 RPTNQ6XPR3 784 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 COPS6Q7L5N1 327 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 RELL1Q8IUW5 271 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 NLGN1Q8N2Q7 840 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 FBXO27Q8NI29 283 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 PRDM14Q9GZV8 571 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.89□□□□□ -1.47
IFT20-205ENST00000578009 USP40Q9NVE5 1235 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 PARP2Q9UGN5 583 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 EXOC6BQ9Y2D4 811 aa5.89□□□□□ -1.47
IFT20-205ENST00000578009 THRAP3Q9Y2W1 955 aaKnown RBP5.89□□□□□ -1.47
IFT20-205ENST00000578009 USP16Q9Y5T5 823 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms