RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 MCF2L2Q86YR7 1114 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 IL31RAQ8NI17 732 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 PANK2Q9BZ23 570 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 SPATC1LQ9H0A9 340 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 NKX2-4Q9H2Z4 354 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 RBPJLQ9UBG7 517 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 CFAP54Q96N23 3096 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 PP2D1A8MPX8 630 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 ATP2A1O14983 1001 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 EIF2AK2P19525 551 aaKnown RBP11.36□□□□□ -0.59
CRLF3-202ENST00000577725 CDC25AP30304 524 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 ZNF76P36508 570 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 SNW1Q13573 536 aaKnown RBP11.36□□□□□ -0.59
CRLF3-202ENST00000577725 CAMK4Q16566 473 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 TKFCQ3LXA3 575 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 ZSCAN23Q3MJ62 389 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 PRR16Q569H4 304 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 CCDC183Q5T5S1 534 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 MCTP2Q6DN12 878 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 ERMP1Q7Z2K6 904 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 PLEKHH3Q7Z736 793 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 NCAPG2Q86XI2 1143 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 MB21D1Q8N884 522 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 ENGASEQ8NFI3 743 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 CYP2W1Q8TAV3 490 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 CRYGNQ8WXF5 182 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 HLA-CQ95604 372 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 FERMT2Q96AC1 680 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 EPSTI1Q96J88 318 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 MOV10L1Q9BXT6 1211 aaKnown RBP11.36□□□□□ -0.59
CRLF3-202ENST00000577725 CLSTN2Q9H4D0 955 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 ACAD9Q9H845 621 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 EHMT1Q9H9B1 1298 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 A1CFQ9NQ94 594 aaKnown RBP11.36□□□□□ -0.59
CRLF3-202ENST00000577725 TMEM39AQ9NV64 488 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 PNMA2Q9UL42 364 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 FRMPD3Q5JV73 1810 aa11.36□□□□□ -0.59
CRLF3-202ENST00000577725 A0A087X0B3 334 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 SYCE3A1L190 88 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 FAM86B1E9PN63 330 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
CRLF3-202ENST00000577725 FAM86B2P0C5J1 330 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 TXKP42681 527 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 GHRHRQ02643 423 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 FAM160A1Q05DH4 1040 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 MAP2K5Q13163 448 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 TMEM240Q5SV17 173 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 WDR78Q5VTH9 848 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 DTHD1Q6ZMT9 781 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 RIOX2Q8IUF8 465 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 FMR1NBQ8N0W7 255 aaPredicted RBP11.35□□□□□ -0.59
CRLF3-202ENST00000577725 GJD3Q8N144 294 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 PDILTQ8N807 584 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 HAS1Q92839 578 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 SYAP1Q96A49 352 aaPredicted RBP11.35□□□□□ -0.59
CRLF3-202ENST00000577725 MBOAT7Q96N66 472 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 MTMR9Q96QG7 549 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 NUP62CLQ9H1M0 184 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 FAM13BQ9NYF5 915 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 CYP39A1Q9NYL5 469 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 FLRT1Q9NZU1 646 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 HPSEQ9Y251 543 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 RABGAP1Q9Y3P9 1069 aa11.35□□□□□ -0.59
CRLF3-202ENST00000577725 MORC2Q9Y6X9 1032 aaPredicted RBP11.35□□□□□ -0.59
CRLF3-202ENST00000577725 MARCH6O60337 910 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 KINO60870 393 aaKnown RBP11.34□□□□□ -0.59
CRLF3-202ENST00000577725 ZNF202O95125 648 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 CYP3A4P08684 503 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 MYCLP12524 364 aaPredicted RBP11.34□□□□□ -0.59
CRLF3-202ENST00000577725 GCFC2P16383 781 aaKnown RBP11.34□□□□□ -0.59
CRLF3-202ENST00000577725 ERCC3P19447 782 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 POU3F3P20264 500 aaPredicted RBP11.34□□□□□ -0.59
CRLF3-202ENST00000577725 TECP42680 631 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 SYKP43405 635 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 USP11P51784 963 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 ERVK-9P63128 1117 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 ERVK-24P63145 666 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 CNTN2Q02246 1040 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 ORC2Q13416 577 aaPredicted RBP11.34□□□□□ -0.59
CRLF3-202ENST00000577725 PPIGQ13427 754 aaKnown RBP eCLIP11.34□□□□□ -0.59
CRLF3-202ENST00000577725 ARL6IP4Q66PJ3 421 aaKnown RBP11.34□□□□□ -0.59
CRLF3-202ENST00000577725 PPP4R3AQ6IN85 833 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 CKAP2LQ8IYA6 745 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 PLCD3Q8N3E9 789 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 ZNF579Q8NAF0 562 aaKnown RBP11.34□□□□□ -0.59
CRLF3-202ENST00000577725 CHST13Q8NET6 341 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 ERCC4Q92889 916 aaPredicted RBP11.34□□□□□ -0.59
CRLF3-202ENST00000577725 LENG9Q96B70 501 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 PXMP2Q9NR77 195 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 DDX19AQ9NUU7 478 aaKnown RBP11.34□□□□□ -0.59
CRLF3-202ENST00000577725 PKD2L1Q9P0L9 805 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 KCNH3Q9ULD8 1083 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 MTCH2Q9Y6C9 303 aa11.34□□□□□ -0.59
CRLF3-202ENST00000577725 ZNFX1Q9P2E3 1918 aaKnown RBP11.33□□□□□ -0.6
CRLF3-202ENST00000577725 CHD7Q9P2D1 2997 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 IGLV3-22A0A075B6J6 115 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 CYP3A7-CYP3A51PA0A087WV96 503 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 FAM237AA0A1B0GTK4 181 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 MSH4O15457 936 aa11.33□□□□□ -0.6
CRLF3-202ENST00000577725 GFRA3O60609 400 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms