RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 ME1P48163 572 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 BFSP2Q13515 415 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 TPRNQ4KMQ1 711 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 ASPRV1Q53RT3 343 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 RILPL1Q5EBL4 403 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 NOSTRINQ8IVI9 506 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 DIS3L2Q8IYB7 885 aaKnown RBP11.55□□□□□ -0.56
SS18-207ENST00000577636 CCDC148Q8NFR7 591 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 MORC4Q8TE76 937 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 GDPD5Q8WTR4 605 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 RRP36Q96EU6 259 aaKnown RBP11.55□□□□□ -0.56
SS18-207ENST00000577636 AIFM3Q96NN9 605 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 SH3GLB2Q9NR46 395 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 RTEL1Q9NZ71 1219 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 RCOR1Q9UKL0 485 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 NOL7Q9UMY1 257 aaKnown RBP11.55□□□□□ -0.56
SS18-207ENST00000577636 CEP131Q9UPN4 1083 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 CNTNAP5Q8WYK1 1306 aa11.55□□□□□ -0.56
SS18-207ENST00000577636 LCHNA4D1U4 455 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 TXNP10599 105 aaKnown RBP11.54□□□□□ -0.56
SS18-207ENST00000577636 DEKP35659 375 aaKnown RBP11.54□□□□□ -0.56
SS18-207ENST00000577636 NLRP5P59047 1200 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 FUT2Q10981 343 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 PTGISQ16647 500 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 PFKFB3Q16875 520 aaPredicted RBP11.54□□□□□ -0.56
SS18-207ENST00000577636 GPATCH4Q5T3I0 446 aaKnown RBP11.54□□□□□ -0.56
SS18-207ENST00000577636 CCDC183Q5T5S1 534 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 SYDE2Q5VT97 1194 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 FAM117BQ6P1L5 589 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 NFRKBQ6P4R8 1299 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 SLC30A10Q6XR72 485 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 RNF207Q6ZRF8 634 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 CCDC73Q6ZRK6 1079 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 SRBD1Q8N5C6 995 aaKnown RBP11.54□□□□□ -0.56
SS18-207ENST00000577636 UIMC1Q96RL1 719 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 SPZ1Q9BXG8 430 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 RANBP17Q9H2T7 1088 aaKnown RBP11.54□□□□□ -0.56
SS18-207ENST00000577636 MAD2L2Q9UI95 211 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 XIRP2A4UGR9 3374 aa11.54□□□□□ -0.56
SS18-207ENST00000577636 CHD9Q3L8U1 2897 aa11.53□□□□□ -0.56
SS18-207ENST00000577636 RBM47A0AV96 593 aaKnown RBP11.53□□□□□ -0.56
SS18-207ENST00000577636 PALM3A6NDB9 673 aaPredicted RBP11.53□□□□□ -0.56
SS18-207ENST00000577636 hCG_1984214I3L0E3 225 aa11.53□□□□□ -0.56
SS18-207ENST00000577636 PITPNM1O00562 1244 aa11.53□□□□□ -0.56
SS18-207ENST00000577636 KPNA6O60684 536 aa11.53□□□□□ -0.56
SS18-207ENST00000577636 NOVP48745 357 aa11.53□□□□□ -0.56
SS18-207ENST00000577636 ZSCAN23Q3MJ62 389 aa11.53□□□□□ -0.56
SS18-207ENST00000577636 GALNT17Q6IS24 598 aa11.53□□□□□ -0.56
SS18-207ENST00000577636 ALYREFQ86V81 257 aaKnown RBP11.53□□□□□ -0.56
SS18-207ENST00000577636 ZNF713Q8N859 430 aaPredicted RBP11.53□□□□□ -0.56
SS18-207ENST00000577636 DCAF4Q8WV16 495 aa11.53□□□□□ -0.56
SS18-207ENST00000577636 USP28Q96RU2 1077 aa11.53□□□□□ -0.56
SS18-207ENST00000577636 MPHOSPH6Q99547 160 aaKnown RBP11.53□□□□□ -0.56
SS18-207ENST00000577636 CD320Q9NPF0 282 aa11.53□□□□□ -0.56
SS18-207ENST00000577636 GJB4Q9NTQ9 266 aa11.53□□□□□ -0.56
SS18-207ENST00000577636 VPS54Q9P1Q0 977 aa11.53□□□□□ -0.56
SS18-207ENST00000577636 KCNJ14Q9UNX9 436 aa11.53□□□□□ -0.56
SS18-207ENST00000577636 CHD7Q9P2D1 2997 aa11.52□□□□□ -0.56
SS18-207ENST00000577636 SCN5AQ14524 2016 aa11.52□□□□□ -0.56
SS18-207ENST00000577636 BTBD18B2RXH4 712 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 NKRFO15226 690 aaKnown RBP eCLIP11.52□□□□□ -0.57
SS18-207ENST00000577636 SPTLC2O15270 562 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 LPXNO60711 386 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 GPR37L1O60883 481 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 BAIAP3O94812 1187 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 BMP15O95972 392 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 SSTR3P32745 418 aaPredicted RBP11.52□□□□□ -0.57
SS18-207ENST00000577636 ZNF445P59923 1031 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 WDR5P61964 334 aaKnown RBP11.52□□□□□ -0.57
SS18-207ENST00000577636 RPS6P62753 249 aaKnown RBP11.52□□□□□ -0.57
SS18-207ENST00000577636 DEFB103AP81534 67 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 PKN1Q16512 942 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 SEPT14Q6ZU15 432 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 HEATR3Q7Z4Q2 680 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 CCDC155Q8N6L0 562 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 SCFD2Q8WU76 684 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 CLEC4DQ8WXI8 215 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 PIBF1Q8WXW3 757 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 PHF20Q9BVI0 1012 aa11.52□□□□□ -0.57
SS18-207ENST00000577636 DDX19AQ9NUU7 478 aaKnown RBP11.52□□□□□ -0.57
SS18-207ENST00000577636 hCG_1642624A0A1W2PR95 340 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 A6NJR5 290 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 PI4K2BG5E9Z4 385 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 ARIH2O95376 493 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 GOLGA8HP0CJ92 632 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 PDHBP11177 359 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 GNA11P29992 359 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 NASPP49321 788 aaPredicted RBP11.51□□□□□ -0.57
SS18-207ENST00000577636 MRE11P49959 708 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 PTPN11Q06124 597 aaPredicted RBP11.51□□□□□ -0.57
SS18-207ENST00000577636 LY6KQ17RY6 165 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 USH1GQ495M9 461 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 GDF6Q6KF10 455 aaPredicted RBP11.51□□□□□ -0.57
SS18-207ENST00000577636 EP400NLQ6ZTU2 488 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 STAG2Q8N3U4 1231 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 AFG1LQ8WV93 481 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 ANP32BQ92688 251 aaKnown RBP11.51□□□□□ -0.57
SS18-207ENST00000577636 SUGCTQ9HAC7 445 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 C6orf50Q9HD87 102 aa11.51□□□□□ -0.57
SS18-207ENST00000577636 C11orf16Q9NQ32 467 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms