RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 NUCB2P80303 420 aa15.78■□□□□ 0.12
RPAIN-217ENST00000575711 FAM173BQ6P4H8 233 aa15.78■□□□□ 0.12
RPAIN-217ENST00000575711 CXCL17Q6UXB2 119 aa15.78■□□□□ 0.12
RPAIN-217ENST00000575711 NECAB2Q7Z6G3 386 aa15.78■□□□□ 0.12
RPAIN-217ENST00000575711 GLT1D1Q96MS3 346 aa15.78■□□□□ 0.12
RPAIN-217ENST00000575711 CEP131Q9UPN4 1083 aa15.78■□□□□ 0.12
RPAIN-217ENST00000575711 GSTTP1A0A1W2PQM5 241 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 WDR64B1ANS9 1081 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 BMP15O95972 392 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 CCNE2O96020 404 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 SFNP31947 248 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 TXKP42681 527 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 JAK3P52333 1124 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 PURAQ00577 322 aaKnown RBP15.77■□□□□ 0.12
RPAIN-217ENST00000575711 PTGDRQ13258 359 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 UTP14CQ5TAP6 766 aaKnown RBP15.77■□□□□ 0.12
RPAIN-217ENST00000575711 MIS18BP1Q6P0N0 1132 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 DIS3LQ8TF46 1054 aaKnown RBP15.77■□□□□ 0.12
RPAIN-217ENST00000575711 FERMT2Q96AC1 680 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 VTI1AQ96AJ9 217 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 PAWRQ96IZ0 340 aaKnown RBP15.77■□□□□ 0.12
RPAIN-217ENST00000575711 MTG1Q9BT17 334 aaPredicted RBP15.77■□□□□ 0.12
RPAIN-217ENST00000575711 SENP6Q9GZR1 1112 aaPredicted RBP15.77■□□□□ 0.12
RPAIN-217ENST00000575711 UNC45AQ9H3U1 944 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 C11orf49Q9H6J7 331 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 TTC12Q9H892 705 aaPredicted RBP15.77■□□□□ 0.12
RPAIN-217ENST00000575711 VAV3Q9UKW4 847 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 PCDHA12Q9UN75 941 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 TELO2Q9Y4R8 837 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 SAMM50Q9Y512 469 aa15.77■□□□□ 0.12
RPAIN-217ENST00000575711 A0A1W2PQ45 241 aaPredicted RBP15.76■□□□□ 0.11
RPAIN-217ENST00000575711 A0A1W2PQY0 241 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 ATG7O95352 703 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 LGALS2P05162 132 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 PSAPP07602 524 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 SUPT20HL2P0C7V6 817 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 ZNF286BP0CG31 522 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 DDIT3P35638 169 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 PPP2R5CQ13362 524 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 SF3A1Q15459 793 aaKnown RBP15.76■□□□□ 0.11
RPAIN-217ENST00000575711 TMEM266Q2M3C6 531 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 MIER3Q7Z3K6 550 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 C4orf32Q8N8J7 132 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 RDM1Q8NG50 284 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 ZNF396Q96N95 335 aaPredicted RBP15.76■□□□□ 0.11
RPAIN-217ENST00000575711 IPO9Q96P70 1041 aaKnown RBP15.76■□□□□ 0.11
RPAIN-217ENST00000575711 KATNAL1Q9BW62 490 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 AZI2Q9H6S1 392 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 STARD7Q9NQZ5 370 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 DISC1Q9NRI5 854 aa15.76■□□□□ 0.11
RPAIN-217ENST00000575711 ZNF215Q9UL58 517 aaPredicted RBP15.76■□□□□ 0.11
RPAIN-217ENST00000575711 EMSYQ7Z589 1322 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 BACH1O14867 736 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 F2P00734 622 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 COL6A1P12109 1028 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 PRPHP41219 470 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 ATP2C1P98194 919 aaPredicted RBP15.75■□□□□ 0.11
RPAIN-217ENST00000575711 FAM160B1Q5W0V3 765 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 NCAPH2Q6IBW4 605 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 B3GNT9Q6UX72 402 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 ABHD15Q6UXT9 468 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 UBE2Q1Q7Z7E8 422 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 GLG1Q92896 1179 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 USP28Q96RU2 1077 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 SMARCAD1Q9H4L7 1026 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 CIZ1Q9ULV3 898 aaPredicted RBP15.75■□□□□ 0.11
RPAIN-217ENST00000575711 ZDHHC9Q9Y397 364 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 PCDHA10Q9Y5I2 948 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 ATP6V1DQ9Y5K8 247 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 CLIC4Q9Y696 253 aa15.75■□□□□ 0.11
RPAIN-217ENST00000575711 LGR5O75473 907 aa15.74■□□□□ 0.11
RPAIN-217ENST00000575711 TECP42680 631 aa15.74■□□□□ 0.11
RPAIN-217ENST00000575711 STAT5BP51692 787 aa15.74■□□□□ 0.11
RPAIN-217ENST00000575711 CHMP4BP1P59074 171 aa15.74■□□□□ 0.11
RPAIN-217ENST00000575711 CEBPZQ03701 1054 aaKnown RBP15.74■□□□□ 0.11
RPAIN-217ENST00000575711 FOXD4L6Q3SYB3 417 aaPredicted RBP15.74■□□□□ 0.11
RPAIN-217ENST00000575711 ARL6IP4Q66PJ3 421 aaKnown RBP15.74■□□□□ 0.11
RPAIN-217ENST00000575711 FOXD4L3Q6VB84 417 aaPredicted RBP15.74■□□□□ 0.11
RPAIN-217ENST00000575711 DTHD1Q6ZMT9 781 aa15.74■□□□□ 0.11
RPAIN-217ENST00000575711 TRIM50Q86XT4 487 aa15.74■□□□□ 0.11
RPAIN-217ENST00000575711 C16orf70Q9BSU1 422 aa15.74■□□□□ 0.11
RPAIN-217ENST00000575711 RAB34Q9BZG1 259 aa15.74■□□□□ 0.11
RPAIN-217ENST00000575711 FTOQ9C0B1 505 aaKnown RBP eCLIP15.74■□□□□ 0.11
RPAIN-217ENST00000575711 ZNF302Q9NR11 478 aa15.74■□□□□ 0.11
RPAIN-217ENST00000575711 ERAP1Q9NZ08 941 aa15.74■□□□□ 0.11
RPAIN-217ENST00000575711 KIAA0100Q14667 2235 aaKnown RBP15.74■□□□□ 0.11
RPAIN-217ENST00000575711 IGKV6D-21A0A0A0MT36 114 aa15.73■□□□□ 0.11
RPAIN-217ENST00000575711 A0A0U1RQG5 324 aaPredicted RBP15.73■□□□□ 0.11
RPAIN-217ENST00000575711 H3BRB1 525 aa15.73■□□□□ 0.11
RPAIN-217ENST00000575711 EML1O00423 815 aa15.73■□□□□ 0.11
RPAIN-217ENST00000575711 PSEN2P49810 448 aa15.73■□□□□ 0.11
RPAIN-217ENST00000575711 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
RPAIN-217ENST00000575711 PSMC6P62333 389 aa15.73■□□□□ 0.11
RPAIN-217ENST00000575711 SPIRE1Q08AE8 756 aa15.73■□□□□ 0.11
RPAIN-217ENST00000575711 MFSD10Q14728 455 aa15.73■□□□□ 0.11
RPAIN-217ENST00000575711 KIAA0753Q2KHM9 967 aa15.73■□□□□ 0.11
RPAIN-217ENST00000575711 ATL3Q6DD88 541 aa15.73■□□□□ 0.11
RPAIN-217ENST00000575711 SWSAP1Q6NVH7 229 aa15.73■□□□□ 0.11
RPAIN-217ENST00000575711 PLPPR4Q7Z2D5 763 aa15.73■□□□□ 0.11
RPAIN-217ENST00000575711 CCDC60Q8IWA6 550 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms