RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 B3GNT9Q6UX72 402 aa19.26■□□□□ 0.67
NUP88-210ENST00000574867 PCSK9Q8NBP7 692 aaKnown RBP19.26■□□□□ 0.67
NUP88-210ENST00000574867 KLHDC9Q8NEP7 349 aa19.26■□□□□ 0.67
NUP88-210ENST00000574867 WDR64B1ANS9 1081 aa19.26■□□□□ 0.67
NUP88-210ENST00000574867 CCNE2O96020 404 aa19.26■□□□□ 0.67
NUP88-210ENST00000574867 FXR2P51116 673 aaKnown RBP eCLIP19.26■□□□□ 0.67
NUP88-210ENST00000574867 SLC39A14Q15043 492 aa19.26■□□□□ 0.67
NUP88-210ENST00000574867 LRRC41Q15345 812 aa19.26■□□□□ 0.67
NUP88-210ENST00000574867 DGKDQ16760 1214 aa19.26■□□□□ 0.67
NUP88-210ENST00000574867 GNASQ5JWF2 1037 aa19.26■□□□□ 0.67
NUP88-210ENST00000574867 DTHD1Q6ZMT9 781 aa19.26■□□□□ 0.67
NUP88-210ENST00000574867 SEPT1Q8WYJ6 367 aa19.26■□□□□ 0.67
NUP88-210ENST00000574867 RAB34Q9BZG1 259 aa19.26■□□□□ 0.67
NUP88-210ENST00000574867 UNC45AQ9H3U1 944 aa19.26■□□□□ 0.67
NUP88-210ENST00000574867 KPNA6O60684 536 aa19.25■□□□□ 0.67
NUP88-210ENST00000574867 PPFIA4O75335 1185 aa19.25■□□□□ 0.67
NUP88-210ENST00000574867 SPIRE1Q08AE8 756 aa19.25■□□□□ 0.67
NUP88-210ENST00000574867 STK38Q15208 465 aa19.25■□□□□ 0.67
NUP88-210ENST00000574867 ABHD8Q96I13 439 aa19.25■□□□□ 0.67
NUP88-210ENST00000574867 MYADML2A6NDP7 307 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 KBTBD13C9JR72 458 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 DNM1LO00429 736 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 CHMP2AO43633 222 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 ATG7O95352 703 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 BEX3Q00994 111 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 MIS18BP1Q6P0N0 1132 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 ANKLE1Q8NAG6 615 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 LINC00301Q8NCQ3 95 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 FERMT2Q96AC1 680 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 TSEN34Q9BSV6 310 aaKnown RBP19.24■□□□□ 0.67
NUP88-210ENST00000574867 TFIP11Q9UBB9 837 aaKnown RBP19.24■□□□□ 0.67
NUP88-210ENST00000574867 SAMM50Q9Y512 469 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 PCDHA10Q9Y5I2 948 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 TFRCP02786 760 aaKnown RBP19.24■□□□□ 0.67
NUP88-210ENST00000574867 NCLP19338 710 aaKnown RBP19.24■□□□□ 0.67
NUP88-210ENST00000574867 TCF7P36402 384 aaPredicted RBP19.24■□□□□ 0.67
NUP88-210ENST00000574867 MIER3Q7Z3K6 550 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 TNS4Q8IZW8 715 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 KCNG4Q8TDN1 519 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 DISC1Q9NRI5 854 aa19.24■□□□□ 0.67
NUP88-210ENST00000574867 EMSYQ7Z589 1322 aa19.23■□□□□ 0.67
NUP88-210ENST00000574867 GSTTP1A0A1W2PQM5 241 aa19.23■□□□□ 0.67
NUP88-210ENST00000574867 MOXD2PA6NHM9 499 aa19.23■□□□□ 0.67
NUP88-210ENST00000574867 MYCNP04198 464 aaPredicted RBP19.23■□□□□ 0.67
NUP88-210ENST00000574867 PSAPP07602 524 aa19.23■□□□□ 0.67
NUP88-210ENST00000574867 SUPT20HL2P0C7V6 817 aa19.23■□□□□ 0.67
NUP88-210ENST00000574867 CCSAPQ6IQ19 270 aaPredicted RBP19.23■□□□□ 0.67
NUP88-210ENST00000574867 ABHD15Q6UXT9 468 aa19.23■□□□□ 0.67
NUP88-210ENST00000574867 SCAND2PQ9GZW5 306 aaPredicted RBP19.23■□□□□ 0.67
NUP88-210ENST00000574867 SPTLC2O15270 562 aa19.23■□□□□ 0.67
NUP88-210ENST00000574867 PPP6R2O75170 966 aa19.23■□□□□ 0.67
NUP88-210ENST00000574867 TECP42680 631 aa19.23■□□□□ 0.67
NUP88-210ENST00000574867 PDIA5Q14554 519 aa19.23■□□□□ 0.67
NUP88-210ENST00000574867 NCAPH2Q6IBW4 605 aa19.23■□□□□ 0.67
NUP88-210ENST00000574867 IGSF22Q8N9C0 903 aa19.23■□□□□ 0.67
NUP88-210ENST00000574867 POTEMA6NI47 508 aa19.22■□□□□ 0.67
NUP88-210ENST00000574867 IRX5P78411 483 aaPredicted RBP19.22■□□□□ 0.67
NUP88-210ENST00000574867 KCNA10Q16322 511 aa19.22■□□□□ 0.67
NUP88-210ENST00000574867 AZI2Q9H6S1 392 aa19.22■□□□□ 0.67
NUP88-210ENST00000574867 TELO2Q9Y4R8 837 aa19.22■□□□□ 0.67
NUP88-210ENST00000574867 STK24Q9Y6E0 443 aa19.22■□□□□ 0.67
NUP88-210ENST00000574867 IGKV6D-21A0A0A0MT36 114 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 VWA3AA6NCI4 1184 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 LGR5O75473 907 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 CABYRO75952 493 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 LGALS2P05162 132 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 ASGR1P07306 291 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 PURAQ00577 322 aaKnown RBP19.21■□□□□ 0.67
NUP88-210ENST00000574867 FAM160B1Q5W0V3 765 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 NEK9Q8TD19 979 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 AK8Q96MA6 479 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 LRWD1Q9UFC0 647 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 FBXO2Q9UK22 296 aaPredicted RBP19.21■□□□□ 0.67
NUP88-210ENST00000574867 ZNF215Q9UL58 517 aaPredicted RBP19.21■□□□□ 0.67
NUP88-210ENST00000574867 SRPRBQ9Y5M8 271 aaKnown RBP19.21■□□□□ 0.67
NUP88-210ENST00000574867 TCHHQ07283 1943 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 MYL3P08590 195 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 MARCKSP29966 332 aaPredicted RBP19.21■□□□□ 0.67
NUP88-210ENST00000574867 LONP1P36776 959 aaKnown RBP19.21■□□□□ 0.67
NUP88-210ENST00000574867 ACLYP53396 1101 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 EPHA7Q15375 998 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 IL17AQ16552 155 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 HAUS3Q68CZ6 603 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 KRI1Q8N9T8 703 aaKnown RBP19.21■□□□□ 0.67
NUP88-210ENST00000574867 ERMNQ8TAM6 284 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 AFAP1L1Q8TED9 768 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 KATNAL1Q9BW62 490 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 RCOR1Q9UKL0 485 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 PHF24Q9UPV7 400 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 KIAA0100Q14667 2235 aaKnown RBP19.21■□□□□ 0.67
NUP88-210ENST00000574867 WDR81Q562E7 1941 aa19.21■□□□□ 0.67
NUP88-210ENST00000574867 IGSF9BQ9UPX0 1349 aa19.2■□□□□ 0.66
NUP88-210ENST00000574867 EML1O00423 815 aa19.2■□□□□ 0.66
NUP88-210ENST00000574867 BACH1O14867 736 aa19.2■□□□□ 0.66
NUP88-210ENST00000574867 F2P00734 622 aa19.2■□□□□ 0.66
NUP88-210ENST00000574867 ZNF286BP0CG31 522 aa19.2■□□□□ 0.66
NUP88-210ENST00000574867 TNPO1Q92973 898 aaKnown RBP19.2■□□□□ 0.66
NUP88-210ENST00000574867 SPATA32Q96LK8 384 aa19.2■□□□□ 0.66
NUP88-210ENST00000574867 MTG1Q9BT17 334 aaPredicted RBP19.2■□□□□ 0.66
NUP88-210ENST00000574867 SMARCAD1Q9H4L7 1026 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms