RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 LRRC34Q8IZ02 419 aa15.77■□□□□ 0.11
SMG6-215ENST00000574501 FAM133AQ8N9E0 248 aa15.77■□□□□ 0.11
SMG6-215ENST00000574501 LUC7LQ9NQ29 371 aaKnown RBP15.77■□□□□ 0.11
SMG6-215ENST00000574501 PCDHA6Q9UN73 950 aa15.77■□□□□ 0.11
SMG6-215ENST00000574501 PCDHA8Q9Y5H6 950 aa15.77■□□□□ 0.11
SMG6-215ENST00000574501 BCORQ6W2J9 1755 aa15.77■□□□□ 0.11
SMG6-215ENST00000574501 KRIT1O00522 736 aa15.76■□□□□ 0.11
SMG6-215ENST00000574501 SHBGP04278 402 aa15.76■□□□□ 0.11
SMG6-215ENST00000574501 TECP42680 631 aa15.76■□□□□ 0.11
SMG6-215ENST00000574501 CDCA2Q69YH5 1023 aaPredicted RBP15.76■□□□□ 0.11
SMG6-215ENST00000574501 EIF1ADQ8N9N8 165 aaKnown RBP15.76■□□□□ 0.11
SMG6-215ENST00000574501 PARD3BQ8TEW8 1205 aa15.76■□□□□ 0.11
SMG6-215ENST00000574501 L3MBTL3Q96JM7 780 aaPredicted RBP15.76■□□□□ 0.11
SMG6-215ENST00000574501 LSM14BQ9BX40 385 aaKnown RBP15.76■□□□□ 0.11
SMG6-215ENST00000574501 ABCF3Q9NUQ8 709 aa15.76■□□□□ 0.11
SMG6-215ENST00000574501 NOC2LQ9Y3T9 749 aaKnown RBP15.76■□□□□ 0.11
SMG6-215ENST00000574501 ATP6V0A2Q9Y487 856 aa15.76■□□□□ 0.11
SMG6-215ENST00000574501 TLDC2A0PJX2 215 aa15.76■□□□□ 0.11
SMG6-215ENST00000574501 SEMA3FQ13275 785 aa15.76■□□□□ 0.11
SMG6-215ENST00000574501 SPICE1Q8N0Z3 855 aa15.76■□□□□ 0.11
SMG6-215ENST00000574501 CNOT10Q9H9A5 744 aaKnown RBP15.76■□□□□ 0.11
SMG6-215ENST00000574501 MTMR7Q9Y216 660 aa15.76■□□□□ 0.11
SMG6-215ENST00000574501 MROH5Q6ZUA9 1318 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 A0A0G2JS52 829 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 A8MUI8 341 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 SLC4A8Q2Y0W8 1093 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 TRPM8Q7Z2W7 1104 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 DDX17Q92841 729 aaKnown RBP15.75■□□□□ 0.11
SMG6-215ENST00000574501 TLCD1Q96CP7 247 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 ZBTB10Q96DT7 871 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 SAAL1Q96ER3 474 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 CUEDC2Q9H467 287 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 NOP53Q9NZM5 478 aaKnown RBP15.75■□□□□ 0.11
SMG6-215ENST00000574501 CEP72Q9P209 647 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 PGRMC1O00264 195 aaKnown RBP15.75■□□□□ 0.11
SMG6-215ENST00000574501 UPP2O95045 317 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 VIMP08670 466 aaKnown RBP15.75■□□□□ 0.11
SMG6-215ENST00000574501 PPP1R2P41236 205 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 KLHL30Q0D2K2 578 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 RIPK1Q13546 671 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 GIGYF2Q6Y7W6 1299 aaKnown RBP15.75■□□□□ 0.11
SMG6-215ENST00000574501 LRRC55Q6ZSA7 311 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 PIGWQ7Z7B1 504 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 METTL13Q8N6R0 699 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 PRMT1Q99873 361 aaKnown RBP15.75■□□□□ 0.11
SMG6-215ENST00000574501 KCPQ6ZWJ8 1503 aa15.75■□□□□ 0.11
SMG6-215ENST00000574501 BAZ2AQ9UIF9 1905 aaKnown RBP15.74■□□□□ 0.11
SMG6-215ENST00000574501 USP17L12C9JPN9 530 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 USP17L21D6R901 530 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 M0R2N6 131 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 CCNT1O60563 726 aaKnown RBP15.74■□□□□ 0.11
SMG6-215ENST00000574501 SMNDC1O75940 238 aaKnown RBP eCLIP15.74■□□□□ 0.11
SMG6-215ENST00000574501 GSTA1P08263 222 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 IFNAR2P48551 515 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 ALDH5A1P51649 535 aaPredicted RBP15.74■□□□□ 0.11
SMG6-215ENST00000574501 USP11P51784 963 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 AMPD3Q01432 767 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 LETM2Q2VYF4 491 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 MIS18BP1Q6P0N0 1132 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 ACTRT1Q8TDG2 376 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 ATXN2LQ8WWM7 1075 aaKnown RBP15.74■□□□□ 0.11
SMG6-215ENST00000574501 TRIM51Q9BSJ1 452 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 YIPF3Q9GZM5 350 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 GOPCQ9HD26 462 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 SAMD15Q9P1V8 674 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 CD2APQ9Y5K6 639 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 DUOX1Q9NRD9 1551 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 MYMKA6NI61 221 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 ASAP2O43150 1006 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 MAP2K1Q02750 393 aaPredicted RBP15.74■□□□□ 0.11
SMG6-215ENST00000574501 ZNF268Q14587 947 aaPredicted RBP15.74■□□□□ 0.11
SMG6-215ENST00000574501 DNAJC10Q8IXB1 793 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 KIF2BQ8N4N8 673 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 ACSBG1Q96GR2 724 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 PBKQ96KB5 322 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.74■□□□□ 0.11
SMG6-215ENST00000574501 FAM167BQ9BTA0 163 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 MAGEF1Q9HAY2 307 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 DOCK2Q92608 1830 aa15.74■□□□□ 0.11
SMG6-215ENST00000574501 MYH1P12882 1939 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 BHMG1C9JSJ3 638 aaPredicted RBP15.73■□□□□ 0.11
SMG6-215ENST00000574501 PDE8AO60658 829 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 UBOX5O94941 541 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 FGFR1OPO95684 399 aaKnown RBP15.73■□□□□ 0.11
SMG6-215ENST00000574501 NQO1P15559 274 aaKnown RBP15.73■□□□□ 0.11
SMG6-215ENST00000574501 ITIH4Q14624 930 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 HEATR3Q7Z4Q2 680 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 SPDYE1Q8NFV5 336 aaPredicted RBP15.73■□□□□ 0.11
SMG6-215ENST00000574501 CENPTQ96BT3 561 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 RIOK1Q9BRS2 568 aaKnown RBP15.73■□□□□ 0.11
SMG6-215ENST00000574501 MMTAG2Q9BU76 263 aaKnown RBP15.73■□□□□ 0.11
SMG6-215ENST00000574501 ADAM7Q9H2U9 754 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 KCNMB3Q9NPA1 279 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 STK38LQ9Y2H1 464 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 OR52Z1P0C646 297 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 IFI35P80217 286 aaPredicted RBP15.73■□□□□ 0.11
SMG6-215ENST00000574501 SV2BQ7L1I2 683 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 ERICH1Q86X53 443 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 CCHCR1Q8TD31 782 aa15.73■□□□□ 0.11
SMG6-215ENST00000574501 NLRP3Q96P20 1036 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms