RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 C6orf15Q6UXA7 325 aaPredicted RBP4.78□□□□□ -1.64
TVP23B-205ENST00000572845 RNF207Q6ZRF8 634 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 PROSER1Q86XN7 944 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 VPS37DQ86XT2 251 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 AMER2Q8N7J2 671 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 ZNF503Q96F45 646 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 LGR4Q9BXB1 951 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 CHMP4AQ9BY43 222 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 TGIF2Q9GZN2 237 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 CDK11AQ9UQ88 783 aaPredicted RBP4.78□□□□□ -1.64
TVP23B-205ENST00000572845 CCDC9Q9Y3X0 531 aaKnown RBP4.78□□□□□ -1.64
TVP23B-205ENST00000572845 H0Y858 1186 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 FOXS1O43638 330 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 CUTAO60888 179 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 IGSF3O75054 1194 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 DDAH1O94760 285 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 CSF2RBP32927 897 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 RAC3P60763 192 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 SF1Q15637 639 aaKnown RBP4.77□□□□□ -1.65
TVP23B-205ENST00000572845 SMN1Q16637 294 aaKnown RBP4.77□□□□□ -1.65
TVP23B-205ENST00000572845 SKIDA1Q1XH10 827 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 NRN1LQ496H8 165 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 PAN2Q504Q3 1202 aaKnown RBP4.77□□□□□ -1.65
TVP23B-205ENST00000572845 DPP8Q6V1X1 898 aaPredicted RBP4.77□□□□□ -1.65
TVP23B-205ENST00000572845 OTOP3Q7RTS5 596 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 TAX1BP1Q86VP1 789 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 PIP4K2CQ8TBX8 421 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 CLEC4DQ8WXI8 215 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 C1orf159Q96HA4 380 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 GNRHR2Q96P88 292 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 LRRC37BQ96QE4 947 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 CARD11Q9BXL7 1154 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 CDIP1Q9H305 208 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 MSL2Q9HCI7 577 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 C11orf21Q9P2W6 132 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 ZFP69BQ9UJL9 534 aa4.77□□□□□ -1.65
TVP23B-205ENST00000572845 SLC27A2O14975 620 aa4.76□□□□□ -1.65
TVP23B-205ENST00000572845 SMAD7O15105 426 aaKnown RBP4.76□□□□□ -1.65
TVP23B-205ENST00000572845 ATF4P18848 351 aaPredicted RBP4.76□□□□□ -1.65
TVP23B-205ENST00000572845 HDLBPQ00341 1268 aaKnown RBP4.76□□□□□ -1.65
TVP23B-205ENST00000572845 DPTQ07507 201 aa4.76□□□□□ -1.65
TVP23B-205ENST00000572845 ZMAT1Q5H9K5 638 aa4.76□□□□□ -1.65
TVP23B-205ENST00000572845 LARP1BQ659C4 914 aaKnown RBP4.76□□□□□ -1.65
TVP23B-205ENST00000572845 DENND5AQ6IQ26 1287 aa4.76□□□□□ -1.65
TVP23B-205ENST00000572845 EEPD1Q7L9B9 569 aa4.76□□□□□ -1.65
TVP23B-205ENST00000572845 NEIL1Q96FI4 390 aaPredicted RBP4.76□□□□□ -1.65
TVP23B-205ENST00000572845 FAM89AQ96GI7 184 aa4.76□□□□□ -1.65
TVP23B-205ENST00000572845 JAM3Q9BX67 310 aa4.76□□□□□ -1.65
TVP23B-205ENST00000572845 CSRNP2Q9H175 543 aa4.76□□□□□ -1.65
TVP23B-205ENST00000572845 KCND1Q9NSA2 647 aa4.76□□□□□ -1.65
TVP23B-205ENST00000572845 ING1Q9UK53 422 aaPredicted RBP4.76□□□□□ -1.65
TVP23B-205ENST00000572845 RAD17O75943 681 aa4.75□□□□□ -1.65
TVP23B-205ENST00000572845 CAPNS1P04632 268 aa4.75□□□□□ -1.65
TVP23B-205ENST00000572845 SSBP05455 408 aaKnown RBP eCLIP4.75□□□□□ -1.65
TVP23B-205ENST00000572845 HMGB1P09429 215 aaKnown RBP4.75□□□□□ -1.65
TVP23B-205ENST00000572845 POLD1P28340 1107 aa4.75□□□□□ -1.65
TVP23B-205ENST00000572845 INHBEP58166 350 aa4.75□□□□□ -1.65
TVP23B-205ENST00000572845 PFKPQ01813 784 aa4.75□□□□□ -1.65
TVP23B-205ENST00000572845 GRIN1Q05586 938 aa4.75□□□□□ -1.65
TVP23B-205ENST00000572845 TUSC3Q13454 348 aa4.75□□□□□ -1.65
TVP23B-205ENST00000572845 USP39Q53GS9 565 aaKnown RBP4.75□□□□□ -1.65
TVP23B-205ENST00000572845 AGBL4Q5VU57 503 aa4.75□□□□□ -1.65
TVP23B-205ENST00000572845 POLNQ7Z5Q5 900 aa4.75□□□□□ -1.65
TVP23B-205ENST00000572845 STPG3Q8N7X2 389 aa4.75□□□□□ -1.65
TVP23B-205ENST00000572845 UHMK1Q8TAS1 419 aaKnown RBP4.75□□□□□ -1.65
TVP23B-205ENST00000572845 SCYL1Q96KG9 808 aa4.75□□□□□ -1.65
TVP23B-205ENST00000572845 ZFYVE21Q9BQ24 234 aa4.75□□□□□ -1.65
TVP23B-205ENST00000572845 RBPJLQ9UBG7 517 aa4.75□□□□□ -1.65
TVP23B-205ENST00000572845 PRKAG3Q9UGI9 489 aa4.75□□□□□ -1.65
TVP23B-205ENST00000572845 ZNF202O95125 648 aa4.74□□□□□ -1.65
TVP23B-205ENST00000572845 GNAT1P11488 350 aa4.74□□□□□ -1.65
TVP23B-205ENST00000572845 CR2P20023 1033 aa4.74□□□□□ -1.65
TVP23B-205ENST00000572845 GLRBP48167 497 aa4.74□□□□□ -1.65
TVP23B-205ENST00000572845 PTH1RQ03431 593 aa4.74□□□□□ -1.65
TVP23B-205ENST00000572845 KRTAP1-1Q07627 177 aa4.74□□□□□ -1.65
TVP23B-205ENST00000572845 KIZQ2M2Z5 673 aa4.74□□□□□ -1.65
TVP23B-205ENST00000572845 LSM12Q3MHD2 195 aaKnown RBP4.74□□□□□ -1.65
TVP23B-205ENST00000572845 CD276Q5ZPR3 534 aa4.74□□□□□ -1.65
TVP23B-205ENST00000572845 DPH6Q7L8W6 267 aa4.74□□□□□ -1.65
TVP23B-205ENST00000572845 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.74□□□□□ -1.65
TVP23B-205ENST00000572845 DCAF4Q8WV16 495 aa4.74□□□□□ -1.65
TVP23B-205ENST00000572845 CHFRQ96EP1 664 aa4.74□□□□□ -1.65
TVP23B-205ENST00000572845 CEP89Q96ST8 783 aa4.74□□□□□ -1.65
TVP23B-205ENST00000572845 CCSER2Q9H7U1 834 aa4.74□□□□□ -1.65
TVP23B-205ENST00000572845 CAPN10Q9HC96 672 aa4.74□□□□□ -1.65
TVP23B-205ENST00000572845 ZNF839A8K0R7 811 aa4.73□□□□□ -1.65
TVP23B-205ENST00000572845 RPS19P39019 145 aaKnown RBP4.73□□□□□ -1.65
TVP23B-205ENST00000572845 EPHA5P54756 1037 aa4.73□□□□□ -1.65
TVP23B-205ENST00000572845 PPP2R2AP63151 447 aa4.73□□□□□ -1.65
TVP23B-205ENST00000572845 HSP90AA2PQ14568 343 aaPredicted RBP4.73□□□□□ -1.65
TVP23B-205ENST00000572845 FUKQ8N0W3 1084 aa4.73□□□□□ -1.65
TVP23B-205ENST00000572845 PHF20Q9BVI0 1012 aa4.73□□□□□ -1.65
TVP23B-205ENST00000572845 AURKAIP1Q9NWT8 199 aaPredicted RBP4.73□□□□□ -1.65
TVP23B-205ENST00000572845 DSEQ9UL01 958 aa4.73□□□□□ -1.65
TVP23B-205ENST00000572845 SLC30A1Q9Y6M5 507 aa4.73□□□□□ -1.65
TVP23B-205ENST00000572845 ZBTB7CA1YPR0 619 aa4.72□□□□□ -1.65
TVP23B-205ENST00000572845 NARSO43776 548 aaKnown RBP4.72□□□□□ -1.65
TVP23B-205ENST00000572845 HSP90B1P14625 803 aaKnown RBP4.72□□□□□ -1.65
TVP23B-205ENST00000572845 ACO1P21399 889 aaKnown RBP4.72□□□□□ -1.65
TVP23B-205ENST00000572845 GRK2P25098 689 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms