RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 NME2P22392 152 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 MRE11P49959 708 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 CASP5P51878 434 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 MAPK10P53779 464 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 PDE3AQ14432 1141 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 CLUL1Q15846 466 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 CLEC16AQ2KHT3 1053 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 FAM209BQ5JX69 171 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 OVOS1Q6IE37 1185 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 LLGL2Q6P1M3 1020 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 CNSTQ6PJW8 725 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 APOA5Q6Q788 366 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 MFSD6Q6ZSS7 791 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 ZNF227Q86WZ6 799 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 DENND1CQ8IV53 801 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 SYTL1Q8IYJ3 562 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 GRAMD1CQ8IYS0 662 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 MICALL1Q8N3F8 863 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 CAMKK1Q8N5S9 505 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 TRIML1Q8N9V2 468 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 LRRN4CLQ8ND94 238 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 C7orf43Q8WVR3 580 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 ASB12Q8WXK4 309 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 GMCL1Q96IK5 515 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 SLC9A7Q96T83 725 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 TXLNGYQ9BZA5 131 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 ORC3Q9UBD5 711 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 ATP6V0A2Q9Y487 856 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 PGPEP1LA6NFU8 196 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 FFAR2O15552 330 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 HOXC11O43248 304 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 MAN1A2O60476 641 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 STARD3NLO95772 234 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 CAPNS1P04632 268 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 KRT10P13645 584 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 P4HA1P13674 534 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 KCNA6P17658 529 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 ATP4AP20648 1035 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 CNTFP26441 200 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 ABCD1P33897 745 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 LIFRP42702 1097 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 GRIA4P48058 902 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 KPNA1P52294 538 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 CSE1LP55060 971 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 ADKP55263 362 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 EVCP57679 992 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 SH3BP2P78314 561 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 SKOR1P84550 965 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 CLN3Q13286 438 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 STARD3Q14849 445 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 ARID5BQ14865 1188 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 TNIP1Q15025 636 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 SF3B3Q15393 1217 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 TAF7Q15545 349 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 HSF5Q4G112 596 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 ODF2Q5BJF6 829 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 RASIP1Q5U651 963 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 CDCP2Q5VXM1 449 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 TRIM68Q6AZZ1 485 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 BTLAQ7Z6A9 289 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 NLRP14Q86W24 1093 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 EPHX4Q8IUS5 362 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 CACNA2D3Q8IZS8 1091 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 ZNF280CQ8ND82 737 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 LILRB1Q8NHL6 650 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 PPP1R35Q8TAP8 253 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 GSDMBQ8TAX9 411 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 RSAD2Q8WXG1 361 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 BRI3BPQ8WY22 251 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 ZNF516Q92618 1163 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 SLC5A5Q92911 643 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 GAL3ST3Q96A11 431 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 JAKMIP1Q96N16 626 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 SLF1Q9BQI6 1058 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 TRPV4Q9HBA0 871 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 SPTLC3Q9NUV7 552 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 THG1LQ9NWX6 298 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 KANSL3Q9P2N6 904 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 RABL2AQ9UBK7 228 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 DENND2AQ9ULE3 1009 aa5.68□□□□□ -1.5
TOPBP1-210ENST00000572787 A0A1W2PPH5 198 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 SLC22A31A6NKX4 558 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 PLOD2O00469 737 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 NCK2O43639 380 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 DGAT1O75907 488 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 SOD2P04179 222 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 CYP2E1P05181 493 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 THP07101 528 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 THEGLP0DJG4 465 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 GRIA2P42262 883 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 TRPC1P48995 793 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 SH3BGRP55822 239 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 CALD1Q05682 793 aaKnown RBP5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 FAAP100Q0VG06 881 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 POSTNQ15063 836 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 PLCL1Q15111 1095 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 C5orf22Q49AR2 442 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 LRCH2Q5VUJ6 765 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 GALNT17Q6IS24 598 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 LRRTM4Q86VH4 590 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms