RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 RRP12Q5JTH9 1297 aaKnown RBP7.43□□□□□ -1.22
PRPF8-204ENST00000572445 ZSCAN25Q6NSZ9 544 aa7.43□□□□□ -1.22
PRPF8-204ENST00000572445 KCTD1Q719H9 257 aa7.43□□□□□ -1.22
PRPF8-204ENST00000572445 FBXO16Q8IX29 292 aaPredicted RBP7.43□□□□□ -1.22
PRPF8-204ENST00000572445 RPAP2Q8IXW5 612 aaPredicted RBP7.43□□□□□ -1.22
PRPF8-204ENST00000572445 REPS2Q8NFH8 660 aa7.43□□□□□ -1.22
PRPF8-204ENST00000572445 RASGRP4Q8TDF6 673 aa7.43□□□□□ -1.22
PRPF8-204ENST00000572445 MICAL1Q8TDZ2 1067 aa7.43□□□□□ -1.22
PRPF8-204ENST00000572445 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.43□□□□□ -1.22
PRPF8-204ENST00000572445 CCDC17Q96LX7 622 aa7.43□□□□□ -1.22
PRPF8-204ENST00000572445 AGBL1Q96MI9 1066 aa7.43□□□□□ -1.22
PRPF8-204ENST00000572445 SEMA6BQ9H3T3 888 aa7.43□□□□□ -1.22
PRPF8-204ENST00000572445 ECHDC1Q9NTX5 307 aa7.43□□□□□ -1.22
PRPF8-204ENST00000572445 PGPEP1Q9NXJ5 209 aa7.43□□□□□ -1.22
PRPF8-204ENST00000572445 PHF24Q9UPV7 400 aa7.43□□□□□ -1.22
PRPF8-204ENST00000572445 GSG1L2A8MUP6 293 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 DCDC2CA8MYV0 355 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 TMEM232C9JQI7 657 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 F5H6K3 240 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 MEN1O00255 615 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 MARCH6O60337 910 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 ZBED4O75132 1171 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 ADAMTS4O75173 837 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 SNAI1O95863 264 aaPredicted RBP7.42□□□□□ -1.22
PRPF8-204ENST00000572445 NEFLP07196 543 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 CSF2RAP15509 400 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 CYP2C18P33260 490 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 PSMC6P62333 389 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 KLRC3Q07444 240 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 GRIN2CQ14957 1233 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 UBE3CQ15386 1083 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 PTPROQ16827 1216 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 C1orf53Q5VUE5 145 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 SLFN13Q68D06 897 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 NSMFQ6X4W1 530 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 ARMCX2Q7L311 632 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 APPBP2Q92624 585 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 HSH2DQ96JZ2 352 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 STRBPQ96SI9 672 aaKnown RBP7.42□□□□□ -1.22
PRPF8-204ENST00000572445 NAPBQ9H115 298 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 PRDM12Q9H4Q4 367 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 INCENPQ9NQS7 918 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 RNF146Q9NTX7 359 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 ADAMTS1Q9UHI8 967 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 FAM184BQ9ULE4 1060 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 STX8Q9UNK0 236 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 UMODL1Q5DID0 1318 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 FRMPD2Q68DX3 1309 aaPredicted RBP7.42□□□□□ -1.22
PRPF8-204ENST00000572445 TRIP12Q14669 1992 aaPredicted RBP7.42□□□□□ -1.22
PRPF8-204ENST00000572445 CDH23Q9H251 3354 aa7.42□□□□□ -1.22
PRPF8-204ENST00000572445 TTC28Q96AY4 2481 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 TGFBR3LH3BV60 316 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 GIPC1O14908 333 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 RNF113AO15541 343 aaKnown RBP7.41□□□□□ -1.22
PRPF8-204ENST00000572445 ASGR1P07306 291 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 MCCP23508 829 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 SLC1A4P43007 532 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 CCL23P55773 120 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 FAAP100Q0VG06 881 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 SNX17Q15036 470 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 GNASQ5JWF2 1037 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 TMEM63BQ5T3F8 832 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 CXCL17Q6UXB2 119 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 TLK2Q86UE8 772 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 CCDC144CPQ8IYA2 1237 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 CKAP2LQ8IYA6 745 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 ZNF444Q8N0Y2 327 aaPredicted RBP7.41□□□□□ -1.22
PRPF8-204ENST00000572445 ABRAQ8N0Z2 381 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 KBTBD3Q8NAB2 608 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 TTC16Q8NEE8 873 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 SNX29Q8TEQ0 813 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 KCNB2Q92953 911 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 TIFAQ96CG3 184 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 GLT1D1Q96MS3 346 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 TRIM56Q9BRZ2 755 aaKnown RBP7.41□□□□□ -1.22
PRPF8-204ENST00000572445 NIFKQ9BYG3 293 aaKnown RBP7.41□□□□□ -1.22
PRPF8-204ENST00000572445 KRTAP3-3Q9BYR6 98 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 KRTAP3-2Q9BYR7 98 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 BCO2Q9BYV7 579 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 NKX2-4Q9H2Z4 354 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 TMEM63CQ9P1W3 806 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 RAPGEFL1Q9UHV5 662 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 ROBO3Q96MS0 1386 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 UNC80Q8N2C7 3258 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 COL4A4P53420 1690 aaPredicted RBP7.41□□□□□ -1.22
PRPF8-204ENST00000572445 TANC1Q9C0D5 1861 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 EYSQ5T1H1 3165 aa7.41□□□□□ -1.22
PRPF8-204ENST00000572445 LAMA2P24043 3122 aaKnown RBP7.4□□□□□ -1.22
PRPF8-204ENST00000572445 A0A0U1RQG5 324 aaPredicted RBP7.4□□□□□ -1.22
PRPF8-204ENST00000572445 TSPY2A6NKD2 308 aa7.4□□□□□ -1.22
PRPF8-204ENST00000572445 RANBP6O60518 1105 aaKnown RBP7.4□□□□□ -1.22
PRPF8-204ENST00000572445 TTLL1O95922 423 aa7.4□□□□□ -1.22
PRPF8-204ENST00000572445 BMP3P12645 472 aa7.4□□□□□ -1.22
PRPF8-204ENST00000572445 COPB2P35606 906 aa7.4□□□□□ -1.22
PRPF8-204ENST00000572445 SLC16A2P36021 539 aa7.4□□□□□ -1.22
PRPF8-204ENST00000572445 PTGIRP43119 386 aa7.4□□□□□ -1.22
PRPF8-204ENST00000572445 PLA2G4AP47712 749 aa7.4□□□□□ -1.22
PRPF8-204ENST00000572445 RPIAP49247 311 aa7.4□□□□□ -1.22
PRPF8-204ENST00000572445 NASPP49321 788 aaPredicted RBP7.4□□□□□ -1.22
PRPF8-204ENST00000572445 IDH3AP50213 366 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms