RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 DDX47Q9H0S4 455 aaKnown RBP18.41■□□□□ 0.54
LITAF-209ENST00000571688 NUP98P52948 1817 aa18.41■□□□□ 0.54
LITAF-209ENST00000571688 ATAD5Q96QE3 1844 aa18.41■□□□□ 0.54
LITAF-209ENST00000571688 CCDC188H7C350 402 aa18.4■□□□□ 0.54
LITAF-209ENST00000571688 PGRMC1O00264 195 aaKnown RBP18.4■□□□□ 0.54
LITAF-209ENST00000571688 CEP104O60308 925 aa18.4■□□□□ 0.54
LITAF-209ENST00000571688 ANP32DO95626 131 aa18.4■□□□□ 0.54
LITAF-209ENST00000571688 DYNLL1P63167 89 aaKnown RBP18.4■□□□□ 0.54
LITAF-209ENST00000571688 BZW1Q7L1Q6 419 aaKnown RBP18.4■□□□□ 0.54
LITAF-209ENST00000571688 TCP11Q8WWU5 503 aa18.4■□□□□ 0.54
LITAF-209ENST00000571688 MMTAG2Q9BU76 263 aaKnown RBP18.4■□□□□ 0.54
LITAF-209ENST00000571688 AP1M1Q9BXS5 423 aa18.4■□□□□ 0.54
LITAF-209ENST00000571688 TANGO6Q9C0B7 1094 aa18.4■□□□□ 0.54
LITAF-209ENST00000571688 KCNMB3Q9NPA1 279 aa18.4■□□□□ 0.54
LITAF-209ENST00000571688 TRPC6Q9Y210 931 aa18.4■□□□□ 0.54
LITAF-209ENST00000571688 LAMB1P07942 1786 aa18.4■□□□□ 0.54
LITAF-209ENST00000571688 PVALEFA0A1B0GWK0 134 aa18.4■□□□□ 0.54
LITAF-209ENST00000571688 ALADP13716 330 aa18.4■□□□□ 0.54
LITAF-209ENST00000571688 SLMAPQ14BN4 828 aa18.4■□□□□ 0.54
LITAF-209ENST00000571688 CDCA2Q69YH5 1023 aaPredicted RBP18.4■□□□□ 0.54
LITAF-209ENST00000571688 PROCA1Q8NCQ7 364 aaPredicted RBP18.4■□□□□ 0.54
LITAF-209ENST00000571688 ARMC2Q8NEN0 867 aa18.4■□□□□ 0.54
LITAF-209ENST00000571688 ZNF483Q8TF39 744 aaPredicted RBP18.4■□□□□ 0.54
LITAF-209ENST00000571688 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.4■□□□□ 0.54
LITAF-209ENST00000571688 NOC2LQ9Y3T9 749 aaKnown RBP18.4■□□□□ 0.54
LITAF-209ENST00000571688 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.4■□□□□ 0.54
LITAF-209ENST00000571688 EIF3BP55884 814 aaKnown RBP18.39■□□□□ 0.54
LITAF-209ENST00000571688 ZNF268Q14587 947 aaPredicted RBP18.39■□□□□ 0.54
LITAF-209ENST00000571688 FAM47AQ5JRC9 791 aa18.39■□□□□ 0.54
LITAF-209ENST00000571688 SPDYCQ5MJ68 293 aa18.39■□□□□ 0.54
LITAF-209ENST00000571688 GALNT17Q6IS24 598 aa18.39■□□□□ 0.54
LITAF-209ENST00000571688 FOXR2Q6PJQ5 311 aa18.39■□□□□ 0.54
LITAF-209ENST00000571688 LMBR1Q8WVP7 490 aa18.39■□□□□ 0.54
LITAF-209ENST00000571688 SLITRK6Q9H5Y7 841 aa18.39■□□□□ 0.54
LITAF-209ENST00000571688 ADAMTS1Q9UHI8 967 aa18.39■□□□□ 0.54
LITAF-209ENST00000571688 CLTAP09496 248 aa18.39■□□□□ 0.53
LITAF-209ENST00000571688 POLR2FP61218 127 aaKnown RBP18.39■□□□□ 0.53
LITAF-209ENST00000571688 EVX2Q03828 476 aa18.39■□□□□ 0.53
LITAF-209ENST00000571688 DHX9Q08211 1270 aaKnown RBP18.39■□□□□ 0.53
LITAF-209ENST00000571688 TMED8Q6PL24 325 aaPredicted RBP18.39■□□□□ 0.53
LITAF-209ENST00000571688 EGFL6Q8IUX8 553 aa18.39■□□□□ 0.53
LITAF-209ENST00000571688 LRRC57Q8N9N7 239 aa18.39■□□□□ 0.53
LITAF-209ENST00000571688 CABLES1Q8TDN4 633 aa18.39■□□□□ 0.53
LITAF-209ENST00000571688 ATXN2LQ8WWM7 1075 aaKnown RBP18.39■□□□□ 0.53
LITAF-209ENST00000571688 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.39■□□□□ 0.53
LITAF-209ENST00000571688 LSM14BQ9BX40 385 aaKnown RBP18.39■□□□□ 0.53
LITAF-209ENST00000571688 PNMA2Q9UL42 364 aa18.39■□□□□ 0.53
LITAF-209ENST00000571688 L3MBTL1Q9Y468 752 aa18.39■□□□□ 0.53
LITAF-209ENST00000571688 SHANK3Q9BYB0 1731 aa18.39■□□□□ 0.53
LITAF-209ENST00000571688 MYMKA6NI61 221 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 SV2BQ7L1I2 683 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 SPAG5Q96R06 1193 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 TXLNGYQ9BZA5 131 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 ABCF2Q9UG63 623 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 KCNG1Q9UIX4 513 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 ZNF142P52746 1687 aaPredicted RBP18.38■□□□□ 0.53
LITAF-209ENST00000571688 AFF2P51816 1311 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 USP17L12C9JPN9 530 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 USP17L21D6R901 530 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 CAND2O75155 1236 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 CHN1P15882 459 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 GCKP35557 465 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 ICA1Q05084 483 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 TBC1D1Q86TI0 1168 aaPredicted RBP18.38■□□□□ 0.53
LITAF-209ENST00000571688 PNMA8AQ86V59 439 aaPredicted RBP18.38■□□□□ 0.53
LITAF-209ENST00000571688 AGAP11Q8TF27 550 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 SPDL1Q96EA4 605 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 FAM114A2Q9NRY5 505 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 BLOC1S4Q9NUP1 217 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 AIPL1Q9NZN9 384 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 AMACRQ9UHK6 382 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 TOGARAM1Q9Y4F4 1720 aa18.38■□□□□ 0.53
LITAF-209ENST00000571688 PPFIA2O75334 1257 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 MMEP08473 750 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 KLHL30Q0D2K2 578 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 CHADLQ6NUI6 762 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 PROM2Q8N271 834 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 RASGEF1CQ8N431 466 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 METTL13Q8N6R0 699 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 NOP53Q9NZM5 478 aaKnown RBP18.37■□□□□ 0.53
LITAF-209ENST00000571688 KRIT1O00522 736 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 MMP13P45452 471 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 RAPGEF1Q13905 1077 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 TRPM8Q7Z2W7 1104 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 CALML4Q96GE6 196 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 ZNF570Q96NI8 536 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 TSG101Q99816 390 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 GOLPH3Q9H4A6 298 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 RIC8AQ9NPQ8 531 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 COL4A3BPQ9Y5P4 624 aa18.37■□□□□ 0.53
LITAF-209ENST00000571688 TTI1O43156 1089 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 ITGA4P13612 1032 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 BRD2P25440 801 aaKnown RBP18.36■□□□□ 0.53
LITAF-209ENST00000571688 INHBEP58166 350 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 C10orf76Q5T2E6 689 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 HOOK3Q86VS8 718 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 CCDC26Q8TAB7 109 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 ACSBG1Q96GR2 724 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 ADAM7Q9H2U9 754 aa18.36■□□□□ 0.53
LITAF-209ENST00000571688 PANK4Q9NVE7 773 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms